RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 GPR107Q5VW38 600 aa3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 PQLC2Q6ZP29 291 aa3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 SNX29P2Q8IUI4 249 aa3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 LGI3Q8N145 548 aa3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 OR4D10Q8NGI6 311 aa3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 OR1B1Q8NGR6 318 aa3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 RNASE11Q8TAA1 199 aaKnown RBP3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 TMEM263Q8WUH6 116 aaKnown RBP3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 C15orf40Q8WUR7 153 aa3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 FRZBQ92765 325 aa3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 YIPF6Q96EC8 236 aa3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 GNPNAT1Q96EK6 184 aaPredicted RBP3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 PBDC1Q9BVG4 233 aa3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 Q9H521 79 aa3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 PTTG2Q9NZH5 202 aa3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 GPR132Q9UNW8 380 aa3.47□□□□□ -1.85
R3HDM1-218ENST00000487294 TRAV26-1A0A087WT03 109 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 A0A0B4J2A0 478 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 PIGBOS1A0A0B4J2F0 54 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 PRSS46E5RG02 174 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 ANKRD65E5RJM6 399 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 GABARAPH6UMI1 98 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 H7BYZ3 331 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 ZNF701M0R085 212 aaPredicted RBP3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 PITX3O75364 302 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 ADAP1O75689 374 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 GABARAPO95166 117 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 TAS2R19P59542 299 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 LYZP61626 148 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 DAZ2Q13117 558 aaKnown RBP3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 SMCO1Q147U7 214 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 MEF2DQ14814 521 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 FCN2Q15485 313 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 NEDD8Q15843 81 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 STEAP1BQ6NZ63 245 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 TMEM144Q7Z5S9 345 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 BAP18Q8IXM2 172 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 OR8A1Q8NGG7 326 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 OR52I2Q8NH67 350 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 MARCH1Q8TCQ1 289 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 DTD1Q8TEA8 209 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 SLC35E1Q96K37 410 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 RSG1Q9BU20 258 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 COMMD3Q9UBI1 195 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 SHPKQ9UHJ6 478 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 C14orf166Q9Y224 244 aaKnown RBP3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 VPS13BQ7Z7G8 4022 aa3.46□□□□□ -1.86
R3HDM1-218ENST00000487294 A0A087X0K7 114 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 DUXBA0A1W2PPF3 345 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 H3BRN7 92 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 VCYO14598 125 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 SIVA1O15304 175 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 HPGDSO60760 199 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 TNFAIP8O95379 198 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 RAB3DO95716 219 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 CFC1BP0CG36 223 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 CFC1P0CG37 223 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 SLC25A6P12236 298 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 RPL7P18124 248 aaKnown RBP3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 CXCL3P19876 107 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 CDKN1BP46527 198 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 PLP1P60201 277 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 KRTAP10-1P60331 282 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 SRPXP78539 464 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 MRPS10P82664 201 aaKnown RBP3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 ACOT7LQ6ZUV0 252 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 NFE4Q86UQ8 179 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 PPP1R14BQ96C90 147 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 LINC01587Q99440 93 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 SHANK2-AS3Q9BTD1 123 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 RBKSQ9H477 322 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 NOP10Q9NPE3 64 aaKnown RBP3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 ZNF586Q9NXT0 402 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 KCNIP3Q9Y2W7 256 aa3.45□□□□□ -1.86
R3HDM1-218ENST00000487294 TRAV12-2A0A075B6T6 113 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 A0A087WTM6 91 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 A0A096LPF7 62 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 K7EPK0 472 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 CTDSPLO15194 276 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 MRPS12O15235 138 aaKnown RBP3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 ZNF182P17025 639 aaPredicted RBP3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 AKR1C4P17516 323 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 CXCL2P19875 107 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 LINC01547P58512 204 aaPredicted RBP3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 RAB11AP62491 216 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 OR5I1Q13606 314 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 OR2F1Q13607 317 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 SCGB2B2Q4G0G5 96 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 TMEM182Q6ZP80 229 aaPredicted RBP3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 LYZL2Q7Z4W2 148 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 RNF182Q8N6D2 247 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 LRTM2Q8N967 370 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 BPIFCQ8NFQ6 507 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 OR1S1Q8NH92 325 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 SMIM4Q8WVI0 70 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 AP3S1Q92572 193 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 VSIG2Q96IQ7 327 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 SCGB3A2Q96PL1 93 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms