RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 FGF8P55075 233 aaPredicted RBP11.35□□□□□ -0.59
CCM2-215ENST00000482714 DEFB121Q5J5C9 76 aa11.35□□□□□ -0.59
CCM2-215ENST00000482714 STHQ8IWL8 128 aa11.35□□□□□ -0.59
CCM2-215ENST00000482714 ZNF738Q8NE65 137 aa11.35□□□□□ -0.59
CCM2-215ENST00000482714 LYPD6BQ8NI32 183 aa11.35□□□□□ -0.59
CCM2-215ENST00000482714 SRD5A3Q9H8P0 318 aa11.35□□□□□ -0.59
CCM2-215ENST00000482714 HLA-DRB4X5D2U9 266 aa11.35□□□□□ -0.59
CCM2-215ENST00000482714 LOC102724200A0A096LPH7 203 aaPredicted RBP11.34□□□□□ -0.59
CCM2-215ENST00000482714 KIR2DL5BA0A0G2JN68 375 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 KIR2DL5BA0A0G2JPC4 375 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 A0A0J9YX75 114 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 H3BMM0 161 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 NUTF2P61970 127 aaKnown RBP11.34□□□□□ -0.59
CCM2-215ENST00000482714 IGFL4Q6B9Z1 124 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 IQCF2Q8IXL9 164 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 KIR2DL5AQ8N109 375 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 EXOC3-AS1Q8N2X6 119 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 RNF182Q8N6D2 247 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 OR8A1Q8NGG7 326 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 KIR2DL5BQ8NHK3 375 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 CMTM2Q8TAZ6 248 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 TXNDC17Q9BRA2 123 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 TCEAL7Q9BRU2 100 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 TMPRSS5Q9H3S3 457 aa11.34□□□□□ -0.59
CCM2-215ENST00000482714 SERTM2A0A1B0GWG4 89 aa11.33□□□□□ -0.6
CCM2-215ENST00000482714 RBAKDNA6NC62 111 aa11.33□□□□□ -0.6
CCM2-215ENST00000482714 PRB2P02812 416 aaPredicted RBP11.33□□□□□ -0.6
CCM2-215ENST00000482714 SLC25A5P05141 298 aaKnown RBP11.33□□□□□ -0.6
CCM2-215ENST00000482714 TAGLN2P37802 199 aaKnown RBP11.33□□□□□ -0.6
CCM2-215ENST00000482714 ACTL10Q5JWF8 245 aa11.33□□□□□ -0.6
CCM2-215ENST00000482714 MORN3Q6PF18 240 aaPredicted RBP11.33□□□□□ -0.6
CCM2-215ENST00000482714 MRAPQ8TCY5 172 aa11.33□□□□□ -0.6
CCM2-215ENST00000482714 LINC00477Q96M19 166 aa11.33□□□□□ -0.6
CCM2-215ENST00000482714 CITED4Q96RK1 184 aa11.33□□□□□ -0.6
CCM2-215ENST00000482714 PRKDCP78527 4128 aaKnown RBP11.33□□□□□ -0.6
CCM2-215ENST00000482714 A8MTW9 85 aa11.32□□□□□ -0.6
CCM2-215ENST00000482714 UBE2CO00762 179 aa11.32□□□□□ -0.6
CCM2-215ENST00000482714 HLA-DMBP28068 263 aa11.32□□□□□ -0.6
CCM2-215ENST00000482714 SUMO1P63165 101 aaKnown RBP11.32□□□□□ -0.6
CCM2-215ENST00000482714 TRPT1Q86TN4 253 aaKnown RBP11.32□□□□□ -0.6
CCM2-215ENST00000482714 C5orf17Q8NAS9 161 aa11.32□□□□□ -0.6
CCM2-215ENST00000482714 OR10J6PQ8NGY7 276 aa11.32□□□□□ -0.6
CCM2-215ENST00000482714 MANBALQ9NQG1 85 aa11.32□□□□□ -0.6
CCM2-215ENST00000482714 TGP01266 2768 aa11.32□□□□□ -0.6
CCM2-215ENST00000482714 FAM74A7A6NL05 159 aa11.32□□□□□ -0.6
CCM2-215ENST00000482714 ZNF705FA8MVS1 300 aaPredicted RBP11.32□□□□□ -0.6
CCM2-215ENST00000482714 M0R3E3 92 aa11.32□□□□□ -0.6
CCM2-215ENST00000482714 APOC4P55056 127 aa11.32□□□□□ -0.6
CCM2-215ENST00000482714 WFDC10AQ9H1F0 79 aa11.32□□□□□ -0.6
CCM2-215ENST00000482714 RBMY1BA6NDE4 496 aaKnown RBP11.31□□□□□ -0.6
CCM2-215ENST00000482714 RBMY1EA6NEQ0 496 aaKnown RBP11.31□□□□□ -0.6
CCM2-215ENST00000482714 FBLL1A6NHQ2 334 aaKnown RBP11.31□□□□□ -0.6
CCM2-215ENST00000482714 KNCNA6PVL3 124 aa11.31□□□□□ -0.6
CCM2-215ENST00000482714 DIRC3C9JPN6 131 aa11.31□□□□□ -0.6
CCM2-215ENST00000482714 F6UZH7 168 aa11.31□□□□□ -0.6
CCM2-215ENST00000482714 IFNA1P01562 189 aa11.31□□□□□ -0.6
CCM2-215ENST00000482714 RBMY1DP0C7P1 496 aaKnown RBP11.31□□□□□ -0.6
CCM2-215ENST00000482714 FRMD6-AS1P0C7T7 363 aa11.31□□□□□ -0.6
CCM2-215ENST00000482714 ZNF124Q15973 351 aa11.31□□□□□ -0.6
CCM2-215ENST00000482714 C9orf47Q6ZRZ4 202 aa11.31□□□□□ -0.6
CCM2-215ENST00000482714 ZNF767PQ75MW2 155 aa11.31□□□□□ -0.6
CCM2-215ENST00000482714 HIST1H2BAQ96A08 127 aa11.31□□□□□ -0.6
CCM2-215ENST00000482714 CSTL1Q9H114 145 aa11.31□□□□□ -0.6
CCM2-215ENST00000482714 PPP1R14DQ9NXH3 145 aa11.31□□□□□ -0.6
CCM2-215ENST00000482714 TRBV7-9A0A0J9YWB2 115 aa11.3□□□□□ -0.6
CCM2-215ENST00000482714 K7EQM0 130 aa11.3□□□□□ -0.6
CCM2-215ENST00000482714 CNN1P51911 297 aaKnown RBP11.3□□□□□ -0.6
CCM2-215ENST00000482714 CCDC28AQ8IWP9 274 aa11.3□□□□□ -0.6
CCM2-215ENST00000482714 ODF3Q96PU9 254 aa11.3□□□□□ -0.6
CCM2-215ENST00000482714 EPDR1Q9UM22 224 aa11.3□□□□□ -0.6
CCM2-215ENST00000482714 PRAC2D3DTV9 90 aa11.29□□□□□ -0.6
CCM2-215ENST00000482714 F6UB75 175 aa11.29□□□□□ -0.6
CCM2-215ENST00000482714 PAGE4O60829 102 aa11.29□□□□□ -0.6
CCM2-215ENST00000482714 AMBPP02760 352 aa11.29□□□□□ -0.6
CCM2-215ENST00000482714 CCL20P78556 96 aa11.29□□□□□ -0.6
CCM2-215ENST00000482714 GDF5OSQ5U4N7 250 aa11.29□□□□□ -0.6
CCM2-215ENST00000482714 OR4B1Q8NGF8 309 aa11.29□□□□□ -0.6
CCM2-215ENST00000482714 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
CCM2-215ENST00000482714 YTHDF2Q9Y5A9 579 aaKnown RBP11.29□□□□□ -0.6
CCM2-215ENST00000482714 GGTLC3B5MD39 225 aa11.28□□□□□ -0.6
CCM2-215ENST00000482714 NPIPB6E9PJ23 425 aa11.28□□□□□ -0.6
CCM2-215ENST00000482714 TCRAP04437 139 aa11.28□□□□□ -0.6
CCM2-215ENST00000482714 NMBP08949 121 aa11.28□□□□□ -0.6
CCM2-215ENST00000482714 UBE2G2P60604 165 aa11.28□□□□□ -0.6
CCM2-215ENST00000482714 RAB14P61106 215 aa11.28□□□□□ -0.6
CCM2-215ENST00000482714 HIST1H1AQ02539 215 aaPredicted RBP11.28□□□□□ -0.6
CCM2-215ENST00000482714 CST9LP1Q5W188 147 aa11.28□□□□□ -0.6
CCM2-215ENST00000482714 LENEPQ9Y5L5 61 aa11.28□□□□□ -0.6
CCM2-215ENST00000482714 AGRNO00468 2067 aa11.28□□□□□ -0.6
CCM2-215ENST00000482714 A0A1B0GV50 99 aa11.27□□□□□ -0.6
CCM2-215ENST00000482714 NDUFS6O75380 124 aaKnown RBP11.27□□□□□ -0.6
CCM2-215ENST00000482714 TSPOP30536 169 aa11.27□□□□□ -0.6
CCM2-215ENST00000482714 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.6
CCM2-215ENST00000482714 Q6ZWC4 215 aa11.27□□□□□ -0.6
CCM2-215ENST00000482714 B9D2Q9BPU9 175 aa11.27□□□□□ -0.6
CCM2-215ENST00000482714 ATG101Q9BSB4 218 aa11.27□□□□□ -0.6
CCM2-215ENST00000482714 AGPAT4-IT1Q9H0P7 198 aa11.27□□□□□ -0.6
CCM2-215ENST00000482714 GNG13Q9P2W3 67 aa11.27□□□□□ -0.6
CCM2-215ENST00000482714 NHLRC4P0CG21 123 aaPredicted RBP11.26□□□□□ -0.61
CCM2-215ENST00000482714 RPL35AP18077 110 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms