RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 Q6ZS46 218 aa11.27□□□□□ -0.61
CHD3-211ENST00000481999 ZNF491Q8N8L2 437 aa11.27□□□□□ -0.61
CHD3-211ENST00000481999 FLNAP21333 2647 aaKnown RBP11.27□□□□□ -0.61
CHD3-211ENST00000481999 C5orf56Q8N8D9 126 aa11.27□□□□□ -0.61
CHD3-211ENST00000481999 DAZAP1Q96EP5 407 aaKnown RBP11.27□□□□□ -0.61
CHD3-211ENST00000481999 GFRA4Q9GZZ7 299 aa11.27□□□□□ -0.61
CHD3-211ENST00000481999 ACANP16112 2415 aa11.26□□□□□ -0.61
CHD3-211ENST00000481999 TCF24Q7RTU0 167 aa11.26□□□□□ -0.61
CHD3-211ENST00000481999 EXOC3-AS1Q8N2X6 119 aa11.26□□□□□ -0.61
CHD3-211ENST00000481999 SSBP4Q9BWG4 385 aaPredicted RBP11.26□□□□□ -0.61
CHD3-211ENST00000481999 CTRLP40313 264 aa11.26□□□□□ -0.61
CHD3-211ENST00000481999 C15orf32Q32M92 178 aa11.26□□□□□ -0.61
CHD3-211ENST00000481999 LINC00322Q6ZN03 302 aaPredicted RBP11.26□□□□□ -0.61
CHD3-211ENST00000481999 RNF125Q96EQ8 232 aa11.26□□□□□ -0.61
CHD3-211ENST00000481999 C21orf62Q9NYP8 219 aa11.26□□□□□ -0.61
CHD3-211ENST00000481999 FAM231BA6NCW3 169 aa11.25□□□□□ -0.61
CHD3-211ENST00000481999 RNF223E7ERA6 249 aa11.25□□□□□ -0.61
CHD3-211ENST00000481999 H3BUX3 64 aa11.25□□□□□ -0.61
CHD3-211ENST00000481999 SPATA45Q537H7 98 aa11.25□□□□□ -0.61
CHD3-211ENST00000481999 Q86TA4 180 aa11.25□□□□□ -0.61
CHD3-211ENST00000481999 OR2D3Q8NGH3 330 aa11.25□□□□□ -0.61
CHD3-211ENST00000481999 C1RLQ9NZP8 487 aa11.25□□□□□ -0.61
CHD3-211ENST00000481999 RNF24Q9Y225 148 aa11.25□□□□□ -0.61
CHD3-211ENST00000481999 MYO9AB2RTY4 2548 aa11.25□□□□□ -0.61
CHD3-211ENST00000481999 TRAV8-1A0A0A6YYK1 113 aa11.25□□□□□ -0.61
CHD3-211ENST00000481999 FCGR2BP31994 310 aaPredicted RBP11.25□□□□□ -0.61
CHD3-211ENST00000481999 GPR183P32249 361 aa11.25□□□□□ -0.61
CHD3-211ENST00000481999 FAM162BQ5T6X4 162 aa11.25□□□□□ -0.61
CHD3-211ENST00000481999 GTSF1Q8WW33 167 aa11.25□□□□□ -0.61
CHD3-211ENST00000481999 RBPMS2Q6ZRY4 209 aaKnown RBP11.24□□□□□ -0.61
CHD3-211ENST00000481999 A0A096LNT2 108 aa11.24□□□□□ -0.61
CHD3-211ENST00000481999 TRBV6-1A0A0K0K1D8 114 aa11.24□□□□□ -0.61
CHD3-211ENST00000481999 NPIPB6E9PJ23 425 aa11.24□□□□□ -0.61
CHD3-211ENST00000481999 M0R2Z0 102 aa11.24□□□□□ -0.61
CHD3-211ENST00000481999 RPLP1P05386 114 aaKnown RBP11.24□□□□□ -0.61
CHD3-211ENST00000481999 CTSGP08311 255 aa11.24□□□□□ -0.61
CHD3-211ENST00000481999 BLCAPP62952 87 aa11.24□□□□□ -0.61
CHD3-211ENST00000481999 RHOGP84095 191 aa11.24□□□□□ -0.61
CHD3-211ENST00000481999 RNASEKQ6P5S7 137 aaKnown RBP11.24□□□□□ -0.61
CHD3-211ENST00000481999 LCNL1Q6ZST4 164 aa11.24□□□□□ -0.61
CHD3-211ENST00000481999 CR1P17927 2039 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 GOSR1O95249 250 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 MFAP4P55083 255 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 PMCHL1Q16048 86 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 BPIFA4PQ86YQ2 179 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 PGLYRP4Q96LB8 373 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 SHANK2-AS3Q9BTD1 123 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 IGHV3OR16-13A0A075B7E8 117 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 IGHV3-74A0A0B4J1X5 117 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 B4DSR2 109 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 GOLT1AQ6ZVE7 132 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 KLHDC1Q8N7A1 406 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 ZNF414Q96IQ9 312 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 UQCR10Q9UDW1 63 aa11.23□□□□□ -0.61
CHD3-211ENST00000481999 TGFAP01135 160 aa11.22□□□□□ -0.61
CHD3-211ENST00000481999 IGLV2-11P01706 119 aa11.22□□□□□ -0.61
CHD3-211ENST00000481999 PRR31Q5SQ13 230 aa11.22□□□□□ -0.61
CHD3-211ENST00000481999 OR4F17Q8NGA8 305 aa11.22□□□□□ -0.61
CHD3-211ENST00000481999 AKAP9Q99996 3911 aa11.22□□□□□ -0.61
CHD3-211ENST00000481999 TRBV19A0A075B6N1 114 aa11.22□□□□□ -0.61
CHD3-211ENST00000481999 IGHV3-66A0A0C4DH42 116 aa11.22□□□□□ -0.61
CHD3-211ENST00000481999 H3BRN7 92 aa11.22□□□□□ -0.61
CHD3-211ENST00000481999 CLEC3BP05452 202 aa11.22□□□□□ -0.61
CHD3-211ENST00000481999 PRNTQ86SH4 94 aa11.22□□□□□ -0.61
CHD3-211ENST00000481999 CCDC140Q96MF4 163 aa11.22□□□□□ -0.61
CHD3-211ENST00000481999 PDZD2O15018 2839 aa11.21□□□□□ -0.61
CHD3-211ENST00000481999 FLNBO75369 2602 aaKnown RBP11.21□□□□□ -0.61
CHD3-211ENST00000481999 IGLC2P0DOY2 106 aa11.21□□□□□ -0.61
CHD3-211ENST00000481999 IGLC3P0DOY3 106 aa11.21□□□□□ -0.61
CHD3-211ENST00000481999 TMEM95Q3KNT9 176 aa11.21□□□□□ -0.61
CHD3-211ENST00000481999 IGFL4Q6B9Z1 124 aa11.21□□□□□ -0.61
CHD3-211ENST00000481999 CLEC19AQ6UXS0 136 aa11.21□□□□□ -0.61
CHD3-211ENST00000481999 LYPD1Q8N2G4 141 aa11.21□□□□□ -0.61
CHD3-211ENST00000481999 IGHV3-49A0A0A0MS15 119 aa11.2□□□□□ -0.62
CHD3-211ENST00000481999 CIARTQ8N365 385 aaPredicted RBP11.2□□□□□ -0.62
CHD3-211ENST00000481999 FAM110DQ8TAY7 271 aaPredicted RBP11.2□□□□□ -0.62
CHD3-211ENST00000481999 MOB4Q9Y3A3 225 aa11.2□□□□□ -0.62
CHD3-211ENST00000481999 WI2-2373I1.2A0A1W2PRP0 233 aa11.2□□□□□ -0.62
CHD3-211ENST00000481999 K7EQM0 130 aa11.2□□□□□ -0.62
CHD3-211ENST00000481999 M0R3E3 92 aa11.2□□□□□ -0.62
CHD3-211ENST00000481999 C16orf54Q6UWD8 224 aa11.2□□□□□ -0.62
CHD3-211ENST00000481999 S100A7AQ86SG5 101 aa11.2□□□□□ -0.62
CHD3-211ENST00000481999 TMEM75Q8N9X5 138 aa11.2□□□□□ -0.62
CHD3-211ENST00000481999 THYN1Q9P016 225 aa11.2□□□□□ -0.62
CHD3-211ENST00000481999 ZFP30Q9Y2G7 519 aa11.2□□□□□ -0.62
CHD3-211ENST00000481999 UNC79Q9P2D8 2635 aa11.2□□□□□ -0.62
CHD3-211ENST00000481999 SETD2Q9BYW2 2564 aaPredicted RBP11.2□□□□□ -0.62
CHD3-211ENST00000481999 ZNF207O43670 478 aaKnown RBP11.19□□□□□ -0.62
CHD3-211ENST00000481999 LCN12Q6JVE5 192 aa11.19□□□□□ -0.62
CHD3-211ENST00000481999 EBLN2Q6P2I7 272 aa11.19□□□□□ -0.62
CHD3-211ENST00000481999 CHCHD1Q96BP2 118 aaKnown RBP11.19□□□□□ -0.62
CHD3-211ENST00000481999 TRAV30A0A087WSZ9 112 aa11.19□□□□□ -0.62
CHD3-211ENST00000481999 HAX1O00165 279 aa11.19□□□□□ -0.62
CHD3-211ENST00000481999 CHEK1O14757 476 aa11.19□□□□□ -0.62
CHD3-211ENST00000481999 FOXA3P55318 350 aaPredicted RBP11.19□□□□□ -0.62
CHD3-211ENST00000481999 URB1-AS1Q96HZ7 61 aa11.19□□□□□ -0.62
CHD3-211ENST00000481999 TXN2Q99757 166 aa11.19□□□□□ -0.62
CHD3-211ENST00000481999 MEGF9Q9H1U4 602 aa11.19□□□□□ -0.62
CHD3-211ENST00000481999 C2orf70A6NJV1 201 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms