RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 CAMK2N1Q7Z7J9 78 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 ZFAND2AQ8N6M9 145 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 MCEEQ96PE7 176 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 DOHHQ9BU89 302 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 C1QTNF6Q9BXI9 259 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 LPAR5Q9H1C0 372 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 TNFSF18Q9UNG2 199 aa2.15□□□□□ -2.07
SMC6-208ENST00000481708 DNAJC13O75165 2243 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 ODAMA1E959 279 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 M0R378 163 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 ZNF861PO60384 105 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 PSMB8P28062 276 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 G6PCP35575 357 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 PPP1CCP36873 323 aaKnown RBP2.14□□□□□ -2.07
SMC6-208ENST00000481708 LPAR6P43657 344 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 EMP1P54849 157 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 ZNF141Q15928 474 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 C16orf47Q6ZP98 133 aaPredicted RBP2.14□□□□□ -2.07
SMC6-208ENST00000481708 Q6ZS49 121 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 C11orf42Q8N5U0 333 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 SLC7A6Q92536 515 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 OR2D2Q9H210 308 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 PHLDA3Q9Y5J5 127 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 IGKV1-9A0A0C4DH69 117 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 C9JAW5 83 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 C9JCJ5 164 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 BET1O15155 118 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 PIGPP57054 158 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 PSG7Q13046 419 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 ZFAND6Q6FIF0 208 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 LZICQ8WZA0 190 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 GPR146Q96CH1 333 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 PHYHIPLQ96FC7 376 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 NMNAT3Q96T66 252 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 NRTNQ99748 197 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 TAC3Q9UHF0 121 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 HIGD1AQ9Y241 93 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 LINC00588Q9Y4M8 146 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 ZGRF1Q86YA3 2104 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 C19orf71A6NCJ1 209 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 RIIAD1A6NNX1 92 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 BUB1B-PAK6H3BSN5 160 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 ZNF73O43830 326 aaPredicted RBP2.14□□□□□ -2.07
SMC6-208ENST00000481708 IGKV1D-33P01593 117 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 IGKV1-33P01594 117 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 ZNF32P17041 273 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 PRSS54Q6PEW0 395 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 OR5W2Q8NH69 310 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 TBL1YQ9BQ87 522 aa2.14□□□□□ -2.07
SMC6-208ENST00000481708 TRBV20OR9-2A0A075B6H5 130 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 A0A096LPI6 279 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 A0A1B0GX51 115 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 BPY2O14599 106 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 GABRR1P24046 479 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 MMDQ15546 238 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 NEDD8Q15843 81 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 BATFQ16520 125 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 Q6Q795 121 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 IDO2Q6ZQW0 420 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 TMEM256Q8N2U0 113 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 RTN4IP1Q8WWV3 396 aaPredicted RBP2.13□□□□□ -2.07
SMC6-208ENST00000481708 FRZBQ92765 325 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 TMEM106AQ96A25 262 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 HSPB9Q9BQS6 159 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 REG4Q9BYZ8 158 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 WDR61Q9GZS3 305 aaKnown RBP2.13□□□□□ -2.07
SMC6-208ENST00000481708 A0A087X0T9 212 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 IGHV3-49A0A0A0MS15 119 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 C5orf58C9J3I9 102 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 MT-ND4LP03901 98 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 S100A11P31949 105 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 RAB5CP51148 216 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 ZNF83P51522 516 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 FABP9Q0Z7S8 132 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 BORCS8Q96FH0 119 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 TMEM133Q9H2Q1 129 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 J3QQQ9 107 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 OR5AC1P0C628 307 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 LINC00694P0DN24 101 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 WHAMMP3Q1A5X7 153 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 KTN1-AS1Q86SY8 53 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 MMGT1Q8N4V1 131 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 CD177Q8N6Q3 437 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 DAND5Q8N907 189 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 OR4K13Q8NH42 304 aa2.13□□□□□ -2.07
SMC6-208ENST00000481708 MRPL30Q8TCC3 161 aaKnown RBP2.13□□□□□ -2.07
SMC6-208ENST00000481708 H1FXQ92522 213 aaKnown RBP2.13□□□□□ -2.07
SMC6-208ENST00000481708 EIF5A2Q9GZV4 153 aaKnown RBP2.13□□□□□ -2.07
SMC6-208ENST00000481708 ZNF860A6NHJ4 632 aa2.12□□□□□ -2.07
SMC6-208ENST00000481708 J3KT08 172 aa2.12□□□□□ -2.07
SMC6-208ENST00000481708 SLC17A3O00476 420 aa2.12□□□□□ -2.07
SMC6-208ENST00000481708 ZNF25P17030 456 aaPredicted RBP2.12□□□□□ -2.07
SMC6-208ENST00000481708 FAM229BQ4G0N7 80 aa2.12□□□□□ -2.07
SMC6-208ENST00000481708 FAM104BQ5XKR9 115 aa2.12□□□□□ -2.07
SMC6-208ENST00000481708 H1FOOQ8IZA3 346 aaPredicted RBP2.12□□□□□ -2.07
SMC6-208ENST00000481708 C14orf178Q8N769 122 aaPredicted RBP2.12□□□□□ -2.07
SMC6-208ENST00000481708 ERG28Q9UKR5 140 aa2.12□□□□□ -2.07
SMC6-208ENST00000481708 IGLV1-50A0A075B6I6 118 aa2.12□□□□□ -2.07
SMC6-208ENST00000481708 IGKV1OR2-108A0A075B7D4 117 aa2.12□□□□□ -2.07
SMC6-208ENST00000481708 NKX2-6A6NCS4 301 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms