RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SRSF1Q07955 248 aaKnown RBP eCLIP11.37□□□□□ -0.59
NPHP4-208ENST00000478423 Q86TA4 180 aa11.37□□□□□ -0.59
NPHP4-208ENST00000478423 GGTLC3B5MD39 225 aa11.36□□□□□ -0.59
NPHP4-208ENST00000478423 K7ERU9 68 aa11.36□□□□□ -0.59
NPHP4-208ENST00000478423 SAP30O75446 220 aa11.36□□□□□ -0.59
NPHP4-208ENST00000478423 TRAV12-3A0A0B4J271 114 aa11.36□□□□□ -0.59
NPHP4-208ENST00000478423 IGHV2-70P01814 119 aa11.36□□□□□ -0.59
NPHP4-208ENST00000478423 IFI27L1Q96BM0 104 aa11.36□□□□□ -0.59
NPHP4-208ENST00000478423 A0A1B0GV90 55 aa11.36□□□□□ -0.59
NPHP4-208ENST00000478423 ZMAT5Q9UDW3 170 aaKnown RBP11.36□□□□□ -0.59
NPHP4-208ENST00000478423 CYSLTR1Q9Y271 337 aa11.36□□□□□ -0.59
NPHP4-208ENST00000478423 PLXNB1O43157 2135 aa11.36□□□□□ -0.59
NPHP4-208ENST00000478423 RASL11AQ6T310 242 aa11.35□□□□□ -0.59
NPHP4-208ENST00000478423 TMEM131Q92545 1883 aa11.35□□□□□ -0.59
NPHP4-208ENST00000478423 TRGV11A0A075B6L2 103 aa11.35□□□□□ -0.59
NPHP4-208ENST00000478423 CHCHD1Q96BP2 118 aaKnown RBP11.35□□□□□ -0.59
NPHP4-208ENST00000478423 FNDC4Q9H6D8 234 aaPredicted RBP11.35□□□□□ -0.59
NPHP4-208ENST00000478423 PFN1P07737 140 aaKnown RBP11.35□□□□□ -0.59
NPHP4-208ENST00000478423 TMEM101Q96IK0 257 aa11.35□□□□□ -0.59
NPHP4-208ENST00000478423 ACTL10Q5JWF8 245 aa11.35□□□□□ -0.59
NPHP4-208ENST00000478423 VCX2Q9H322 139 aa11.35□□□□□ -0.59
NPHP4-208ENST00000478423 TRAV9-2A0A087WT02 112 aa11.34□□□□□ -0.59
NPHP4-208ENST00000478423 IGLC1P0CG04 106 aa11.34□□□□□ -0.59
NPHP4-208ENST00000478423 ERCC8Q13216 396 aa11.34□□□□□ -0.59
NPHP4-208ENST00000478423 MSMPQ1L6U9 139 aa11.34□□□□□ -0.59
NPHP4-208ENST00000478423 ORMDL2Q53FV1 153 aa11.34□□□□□ -0.59
NPHP4-208ENST00000478423 TRBV19A0A075B6N1 114 aa11.34□□□□□ -0.59
NPHP4-208ENST00000478423 IFI27P40305 119 aaPredicted RBP11.34□□□□□ -0.59
NPHP4-208ENST00000478423 NDUFAF3Q9BU61 184 aa11.34□□□□□ -0.59
NPHP4-208ENST00000478423 CR1LQ2VPA4 569 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 TMEM249Q2WGJ8 235 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 KIAA1549LQ6ZVL6 1849 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 MRAP2Q96G30 205 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 Q96MF0 132 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 C2orf88Q9BSF0 95 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 RNF182Q8N6D2 247 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 IGHV2-5P01817 119 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 PRR20EP86478 221 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 PRR20CP86479 221 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 PRR20DP86480 221 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 PRR20BP86481 221 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 PRR20AP86496 221 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 PYY3Q5JQD4 70 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 TOMM7Q9P0U1 55 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 LAMTOR2Q9Y2Q5 125 aa11.33□□□□□ -0.6
NPHP4-208ENST00000478423 AMN1Q8IY45 258 aa11.32□□□□□ -0.6
NPHP4-208ENST00000478423 IGLC7A0M8Q6 106 aa11.32□□□□□ -0.6
NPHP4-208ENST00000478423 ARMS2P0C7Q2 107 aa11.32□□□□□ -0.6
NPHP4-208ENST00000478423 TDGF1P3P51864 188 aa11.32□□□□□ -0.6
NPHP4-208ENST00000478423 FXYD7P58549 80 aa11.32□□□□□ -0.6
NPHP4-208ENST00000478423 C1orf122Q6ZSJ8 110 aa11.32□□□□□ -0.6
NPHP4-208ENST00000478423 DMRTC2Q8IXT2 367 aaPredicted RBP11.32□□□□□ -0.6
NPHP4-208ENST00000478423 C14orf178Q8N769 122 aaPredicted RBP11.32□□□□□ -0.6
NPHP4-208ENST00000478423 Q8NA96 180 aa11.32□□□□□ -0.6
NPHP4-208ENST00000478423 DEFB104AQ8WTQ1 72 aa11.32□□□□□ -0.6
NPHP4-208ENST00000478423 IGFBPL1Q8WX77 278 aa11.32□□□□□ -0.6
NPHP4-208ENST00000478423 SLC25A2Q9BXI2 301 aa11.32□□□□□ -0.6
NPHP4-208ENST00000478423 TRGV4A0A0C4DH28 118 aa11.31□□□□□ -0.6
NPHP4-208ENST00000478423 ADORA2A-AS1P86434 159 aa11.31□□□□□ -0.6
NPHP4-208ENST00000478423 ZNF114Q8NC26 417 aa11.31□□□□□ -0.6
NPHP4-208ENST00000478423 DPM2O94777 84 aa11.31□□□□□ -0.6
NPHP4-208ENST00000478423 C8orf31Q8N9H6 132 aa11.31□□□□□ -0.6
NPHP4-208ENST00000478423 NACAE9PAV3 2078 aa11.31□□□□□ -0.6
NPHP4-208ENST00000478423 ABCA12Q86UK0 2595 aa11.31□□□□□ -0.6
NPHP4-208ENST00000478423 SMIM13P0DJ93 91 aa11.31□□□□□ -0.6
NPHP4-208ENST00000478423 ARHGAP21Q5T5U3 1957 aa11.3□□□□□ -0.6
NPHP4-208ENST00000478423 C21orf62-AS1Q17RA5 79 aa11.3□□□□□ -0.6
NPHP4-208ENST00000478423 CHD3Q12873 2000 aaKnown RBP11.3□□□□□ -0.6
NPHP4-208ENST00000478423 PLP1P60201 277 aa11.3□□□□□ -0.6
NPHP4-208ENST00000478423 DEFB131AP59861 70 aa11.3□□□□□ -0.6
NPHP4-208ENST00000478423 RCHY1Q96PM5 261 aa11.3□□□□□ -0.6
NPHP4-208ENST00000478423 DOPEY1Q5JWR5 2465 aa11.3□□□□□ -0.6
NPHP4-208ENST00000478423 APOMO95445 188 aa11.29□□□□□ -0.6
NPHP4-208ENST00000478423 FAM120AOSQ5T036 256 aa11.29□□□□□ -0.6
NPHP4-208ENST00000478423 GTSCR1Q86UQ5 136 aa11.29□□□□□ -0.6
NPHP4-208ENST00000478423 SMIM12Q96EX1 92 aa11.29□□□□□ -0.6
NPHP4-208ENST00000478423 IGKV3D-20A0A0C4DH25 116 aa11.29□□□□□ -0.6
NPHP4-208ENST00000478423 SMKR1H3BMG3 65 aa11.29□□□□□ -0.6
NPHP4-208ENST00000478423 IGHV3-73A0A0B4J1V6 119 aa11.29□□□□□ -0.6
NPHP4-208ENST00000478423 COTL1Q14019 142 aa11.29□□□□□ -0.6
NPHP4-208ENST00000478423 IL17RELQ6ZVW7 336 aa11.29□□□□□ -0.6
NPHP4-208ENST00000478423 DPH3P1Q9H4G8 78 aa11.29□□□□□ -0.6
NPHP4-208ENST00000478423 H3BRM9 83 aa11.29□□□□□ -0.6
NPHP4-208ENST00000478423 C3orf79P0CE67 100 aa11.29□□□□□ -0.6
NPHP4-208ENST00000478423 ZNF876PQ49A33 203 aa11.29□□□□□ -0.6
NPHP4-208ENST00000478423 UBE2E2Q96LR5 201 aa11.29□□□□□ -0.6
NPHP4-208ENST00000478423 IGHV4-61A0A0C4DH41 118 aa11.28□□□□□ -0.6
NPHP4-208ENST00000478423 C10orf142B7Z368 130 aa11.28□□□□□ -0.6
NPHP4-208ENST00000478423 J3QKU1 62 aa11.28□□□□□ -0.6
NPHP4-208ENST00000478423 PRB1P04280 392 aa11.28□□□□□ -0.6
NPHP4-208ENST00000478423 THAP8Q8NA92 274 aa11.28□□□□□ -0.6
NPHP4-208ENST00000478423 LAGE3Q14657 143 aa11.28□□□□□ -0.6
NPHP4-208ENST00000478423 ZNF491Q8N8L2 437 aa11.28□□□□□ -0.6
NPHP4-208ENST00000478423 OR11H6Q8NGC7 330 aa11.28□□□□□ -0.6
NPHP4-208ENST00000478423 MRPL16Q9NX20 251 aaKnown RBP11.28□□□□□ -0.6
NPHP4-208ENST00000478423 A0A1B0GUS0 222 aa11.27□□□□□ -0.6
NPHP4-208ENST00000478423 SSBP2P81877 361 aaPredicted RBP11.27□□□□□ -0.6
NPHP4-208ENST00000478423 C1orf194Q5T5A4 169 aa11.27□□□□□ -0.6
NPHP4-208ENST00000478423 COPS9Q8WXC6 57 aa11.27□□□□□ -0.6
NPHP4-208ENST00000478423 C10orf91Q5T1B1 145 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms