RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SMIM24O75264 130 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 IGLV1-51P01701 117 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 SAA1P0DJI8 122 aaPredicted RBP2.37□□□□□ -2.03
SMC5-203ENST00000475540 NCS1P62166 190 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 QRFPP83859 136 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 CDK6Q00534 326 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 Q1T7F1 81 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 GLYATL3Q5SZD4 288 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 RPL13AP3Q6NVV1 102 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 HAGHLQ6PII5 290 aaPredicted RBP2.37□□□□□ -2.03
SMC5-203ENST00000475540 CCL4L1Q8NHW4 92 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 SFT2D1Q8WV19 159 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 OR4C12Q96R67 309 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 NIT2Q9NQR4 276 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 MYO9BQ13459 2157 aa2.37□□□□□ -2.03
SMC5-203ENST00000475540 LOC107986453A0A1B0GWG9 222 aa2.36□□□□□ -2.03
SMC5-203ENST00000475540 HBDP02042 147 aa2.36□□□□□ -2.03
SMC5-203ENST00000475540 TCRAP04437 139 aa2.36□□□□□ -2.03
SMC5-203ENST00000475540 TSPAN19P0C672 248 aa2.36□□□□□ -2.03
SMC5-203ENST00000475540 ZNF93P35789 620 aaPredicted RBP2.36□□□□□ -2.03
SMC5-203ENST00000475540 SPCS2Q15005 226 aa2.36□□□□□ -2.03
SMC5-203ENST00000475540 C2orf82Q6UX34 121 aa2.36□□□□□ -2.03
SMC5-203ENST00000475540 RPS19BP1Q86WX3 136 aaKnown RBP2.36□□□□□ -2.03
SMC5-203ENST00000475540 MYO5AQ9Y4I1 1855 aaKnown RBP2.36□□□□□ -2.03
SMC5-203ENST00000475540 ADGRB3O60242 1522 aa2.36□□□□□ -2.03
SMC5-203ENST00000475540 KDM6AO15550 1401 aaPredicted RBP2.35□□□□□ -2.03
SMC5-203ENST00000475540 WDR7Q9Y4E6 1490 aa2.35□□□□□ -2.03
SMC5-203ENST00000475540 A0A087WSZ3 146 aa2.35□□□□□ -2.03
SMC5-203ENST00000475540 TRAV27A0A087WT01 109 aa2.35□□□□□ -2.03
SMC5-203ENST00000475540 C2orf70A6NJV1 201 aa2.35□□□□□ -2.03
SMC5-203ENST00000475540 E7EUB6 86 aa2.35□□□□□ -2.03
SMC5-203ENST00000475540 SLC25A5P05141 298 aaKnown RBP2.35□□□□□ -2.03
SMC5-203ENST00000475540 PDE6HQ13956 83 aa2.35□□□□□ -2.03
SMC5-203ENST00000475540 CIRBPQ14011 172 aaKnown RBP2.35□□□□□ -2.03
SMC5-203ENST00000475540 DEFB113Q30KQ7 82 aa2.35□□□□□ -2.03
SMC5-203ENST00000475540 C1orf134Q5TEV5 83 aa2.35□□□□□ -2.03
SMC5-203ENST00000475540 RAB37Q96AX2 223 aa2.35□□□□□ -2.03
SMC5-203ENST00000475540 RFX7Q2KHR2 1363 aa2.35□□□□□ -2.03
SMC5-203ENST00000475540 MUC6Q6W4X9 2439 aa2.34□□□□□ -2.03
SMC5-203ENST00000475540 TNS3Q68CZ2 1445 aa2.34□□□□□ -2.03
SMC5-203ENST00000475540 TRAV14DV4A0A0A6YYC5 116 aa2.34□□□□□ -2.03
SMC5-203ENST00000475540 TCRBV4S1A1TA0A5B7 111 aa2.34□□□□□ -2.03
SMC5-203ENST00000475540 B4DSR2 109 aa2.34□□□□□ -2.03
SMC5-203ENST00000475540 NCR2O95944 276 aa2.34□□□□□ -2.03
SMC5-203ENST00000475540 TRACP01848 142 aa2.34□□□□□ -2.03
SMC5-203ENST00000475540 HIST1H1BP16401 226 aaKnown RBP2.34□□□□□ -2.03
SMC5-203ENST00000475540 BRS3P32247 399 aa2.34□□□□□ -2.03
SMC5-203ENST00000475540 ARPINQ7Z6K5 226 aa2.34□□□□□ -2.03
SMC5-203ENST00000475540 OR5AK2Q8NH90 309 aa2.34□□□□□ -2.03
SMC5-203ENST00000475540 CLEC2BQ92478 149 aa2.34□□□□□ -2.03
SMC5-203ENST00000475540 TP53RKQ96S44 253 aa2.34□□□□□ -2.03
SMC5-203ENST00000475540 ERG28Q9UKR5 140 aa2.34□□□□□ -2.03
SMC5-203ENST00000475540 NCKAP5O14513 1909 aa2.34□□□□□ -2.04
SMC5-203ENST00000475540 PRG4Q92954 1404 aaPredicted RBP2.34□□□□□ -2.04
SMC5-203ENST00000475540 KDM5CP41229 1560 aa2.33□□□□□ -2.04
SMC5-203ENST00000475540 ANAPC1Q9H1A4 1944 aa2.33□□□□□ -2.04
SMC5-203ENST00000475540 CCDC160A6NGH7 325 aa2.33□□□□□ -2.04
SMC5-203ENST00000475540 ZNF727A8MUV8 499 aa2.33□□□□□ -2.04
SMC5-203ENST00000475540 K7ERU9 68 aa2.33□□□□□ -2.04
SMC5-203ENST00000475540 GPX1P07203 203 aa2.33□□□□□ -2.04
SMC5-203ENST00000475540 DNAJB13P59910 316 aa2.33□□□□□ -2.04
SMC5-203ENST00000475540 RPS25P62851 125 aaKnown RBP2.33□□□□□ -2.04
SMC5-203ENST00000475540 CTAGE3PQ8IX95 158 aa2.33□□□□□ -2.04
SMC5-203ENST00000475540 C4orf3Q8WVX3 66 aa2.33□□□□□ -2.04
SMC5-203ENST00000475540 LPAR5Q9H1C0 372 aa2.33□□□□□ -2.04
SMC5-203ENST00000475540 SOX21Q9Y651 276 aaPredicted RBP2.33□□□□□ -2.04
SMC5-203ENST00000475540 NUMA1Q14980 2115 aa2.32□□□□□ -2.04
SMC5-203ENST00000475540 COL5A3P25940 1745 aaPredicted RBP2.32□□□□□ -2.04
SMC5-203ENST00000475540 TRAV10A0A0B4J240 114 aa2.32□□□□□ -2.04
SMC5-203ENST00000475540 ERC2-IT1O76042 136 aa2.32□□□□□ -2.04
SMC5-203ENST00000475540 IGLC6P0CF74 106 aa2.32□□□□□ -2.04
SMC5-203ENST00000475540 HLA-DRB4P13762 266 aa2.32□□□□□ -2.04
SMC5-203ENST00000475540 AKR1D1P51857 326 aa2.32□□□□□ -2.04
SMC5-203ENST00000475540 GLIPR1L1Q6UWM5 242 aa2.32□□□□□ -2.04
SMC5-203ENST00000475540 OR10AC1Q8NH08 325 aa2.32□□□□□ -2.04
SMC5-203ENST00000475540 OR4C6Q8NH72 309 aa2.32□□□□□ -2.04
SMC5-203ENST00000475540 TNFSF18Q9UNG2 199 aa2.32□□□□□ -2.04
SMC5-203ENST00000475540 HLA-DRB4X5D2U9 266 aa2.32□□□□□ -2.04
SMC5-203ENST00000475540 MYLKQ15746 1914 aa2.32□□□□□ -2.04
SMC5-203ENST00000475540 COL1A1P02452 1464 aaPredicted RBP2.32□□□□□ -2.04
SMC5-203ENST00000475540 MPDZO75970 2070 aa2.32□□□□□ -2.04
SMC5-203ENST00000475540 SRCAPQ6ZRS2 3230 aa2.31□□□□□ -2.04
SMC5-203ENST00000475540 PNMA8CA0A1B0GUJ8 204 aa2.31□□□□□ -2.04
SMC5-203ENST00000475540 CCL4P13236 92 aa2.31□□□□□ -2.04
SMC5-203ENST00000475540 KDELR1P24390 212 aa2.31□□□□□ -2.04
SMC5-203ENST00000475540 ETV6P41212 452 aa2.31□□□□□ -2.04
SMC5-203ENST00000475540 COPZ1P61923 177 aa2.31□□□□□ -2.04
SMC5-203ENST00000475540 BLCAPP62952 87 aa2.31□□□□□ -2.04
SMC5-203ENST00000475540 SELENOWP63302 87 aa2.31□□□□□ -2.04
SMC5-203ENST00000475540 DIAPH2-AS1Q14236 149 aa2.31□□□□□ -2.04
SMC5-203ENST00000475540 TMEM91Q6ZNR0 172 aa2.31□□□□□ -2.04
SMC5-203ENST00000475540 FP248Q71RG6 208 aaPredicted RBP2.31□□□□□ -2.04
SMC5-203ENST00000475540 CLECL1Q8IZS7 167 aa2.31□□□□□ -2.04
SMC5-203ENST00000475540 ZNF431Q8TF32 576 aaPredicted RBP2.31□□□□□ -2.04
SMC5-203ENST00000475540 ARL11Q969Q4 196 aa2.31□□□□□ -2.04
SMC5-203ENST00000475540 GGACTQ9BVM4 153 aa2.31□□□□□ -2.04
SMC5-203ENST00000475540 FKBP11Q9NYL4 201 aa2.31□□□□□ -2.04
SMC5-203ENST00000475540 FANCMQ8IYD8 2048 aa2.3□□□□□ -2.04
SMC5-203ENST00000475540 BAHCC1Q9P281 2608 aa2.3□□□□□ -2.04
SMC5-203ENST00000475540 LINC00694P0DN24 101 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms