RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 ATP6V0CP27449 155 aa11.11□□□□□ -0.63
SRRT-209ENST00000474896 ID1P41134 155 aa11.11□□□□□ -0.63
SRRT-209ENST00000474896 C9orf62Q8N4C0 152 aa11.11□□□□□ -0.63
SRRT-209ENST00000474896 OR4B1Q8NGF8 309 aa11.11□□□□□ -0.63
SRRT-209ENST00000474896 OR1L4Q8NGR5 311 aa11.11□□□□□ -0.63
SRRT-209ENST00000474896 TMEM37Q8WXS4 190 aa11.11□□□□□ -0.63
SRRT-209ENST00000474896 UHRF2Q96PU4 802 aa11.11□□□□□ -0.63
SRRT-209ENST00000474896 SAV1Q9H4B6 383 aaPredicted RBP11.11□□□□□ -0.63
SRRT-209ENST00000474896 H3BRN7 92 aa11.1□□□□□ -0.63
SRRT-209ENST00000474896 S100A7P31151 101 aa11.1□□□□□ -0.63
SRRT-209ENST00000474896 RNF212Q495C1 297 aa11.1□□□□□ -0.63
SRRT-209ENST00000474896 GCSAMLQ5JQS6 135 aa11.1□□□□□ -0.63
SRRT-209ENST00000474896 FFAR4Q5NUL3 377 aa11.1□□□□□ -0.63
SRRT-209ENST00000474896 FOXI2Q6ZQN5 318 aa11.1□□□□□ -0.63
SRRT-209ENST00000474896 ZNF575Q86XF7 245 aa11.1□□□□□ -0.63
SRRT-209ENST00000474896 PFDN5Q99471 154 aa11.1□□□□□ -0.63
SRRT-209ENST00000474896 SHANK2-AS3Q9BTD1 123 aa11.1□□□□□ -0.63
SRRT-209ENST00000474896 ZNF471Q9BX82 626 aaPredicted RBP11.1□□□□□ -0.63
SRRT-209ENST00000474896 KRTAP4-5Q9BYR2 181 aa11.1□□□□□ -0.63
SRRT-209ENST00000474896 SLC25A39Q9BZJ4 359 aaPredicted RBP11.1□□□□□ -0.63
SRRT-209ENST00000474896 PKD1P98161 4303 aa11.1□□□□□ -0.63
SRRT-209ENST00000474896 TEX48A0A1B0GUV7 120 aa11.09□□□□□ -0.63
SRRT-209ENST00000474896 ZNF98A6NK75 572 aa11.09□□□□□ -0.63
SRRT-209ENST00000474896 NKX2-5P52952 324 aaPredicted RBP11.09□□□□□ -0.63
SRRT-209ENST00000474896 SOHLH1Q5JUK2 328 aa11.09□□□□□ -0.63
SRRT-209ENST00000474896 C10orf113Q5VZT2 155 aa11.09□□□□□ -0.63
SRRT-209ENST00000474896 S100A7AQ86SG5 101 aa11.09□□□□□ -0.63
SRRT-209ENST00000474896 GNPNAT1Q96EK6 184 aaPredicted RBP11.09□□□□□ -0.63
SRRT-209ENST00000474896 CLUHP3Q96NS8 147 aa11.09□□□□□ -0.63
SRRT-209ENST00000474896 PSMG3Q9BT73 122 aaPredicted RBP11.09□□□□□ -0.63
SRRT-209ENST00000474896 SLC35B3Q9H1N7 401 aa11.09□□□□□ -0.63
SRRT-209ENST00000474896 SH3BGRL3Q9H299 93 aa11.09□□□□□ -0.63
SRRT-209ENST00000474896 DNAJC4Q9NNZ3 241 aa11.09□□□□□ -0.63
SRRT-209ENST00000474896 DNAH11Q96DT5 4516 aa11.08□□□□□ -0.64
SRRT-209ENST00000474896 PSG9Q00887 426 aa11.08□□□□□ -0.64
SRRT-209ENST00000474896 C1orf194Q5T5A4 169 aa11.08□□□□□ -0.64
SRRT-209ENST00000474896 C1orf134Q5TEV5 83 aa11.08□□□□□ -0.64
SRRT-209ENST00000474896 LINC00305Q7Z4B0 112 aa11.08□□□□□ -0.64
SRRT-209ENST00000474896 OR2G3Q8NGZ4 309 aa11.08□□□□□ -0.64
SRRT-209ENST00000474896 SLC25A22Q9H936 323 aa11.08□□□□□ -0.64
SRRT-209ENST00000474896 GOLT1BQ9Y3E0 138 aa11.08□□□□□ -0.64
SRRT-209ENST00000474896 DYNC1H1Q14204 4646 aaKnown RBP11.07□□□□□ -0.64
SRRT-209ENST00000474896 HBE1P02100 147 aa11.07□□□□□ -0.64
SRRT-209ENST00000474896 PSMB3P49720 205 aa11.07□□□□□ -0.64
SRRT-209ENST00000474896 FAM78BQ5VT40 261 aa11.07□□□□□ -0.64
SRRT-209ENST00000474896 MORN5Q5VZ52 161 aa11.07□□□□□ -0.64
SRRT-209ENST00000474896 EBLN2Q6P2I7 272 aa11.07□□□□□ -0.64
SRRT-209ENST00000474896 OR8I2Q8N0Y5 310 aa11.07□□□□□ -0.64
SRRT-209ENST00000474896 C1orf158Q8N1D5 194 aa11.07□□□□□ -0.64
SRRT-209ENST00000474896 SLC25A32Q9H2D1 315 aa11.07□□□□□ -0.64
SRRT-209ENST00000474896 YTHDF2Q9Y5A9 579 aaKnown RBP11.07□□□□□ -0.64
SRRT-209ENST00000474896 NACAE9PAV3 2078 aa11.06□□□□□ -0.64
SRRT-209ENST00000474896 LOC102723971A0A1B0GUV8 181 aa11.06□□□□□ -0.64
SRRT-209ENST00000474896 F6UB75 175 aa11.06□□□□□ -0.64
SRRT-209ENST00000474896 SOCS3O14543 225 aa11.06□□□□□ -0.64
SRRT-209ENST00000474896 RAB2AP61019 212 aa11.06□□□□□ -0.64
SRRT-209ENST00000474896 EIF5AP63241 154 aaKnown RBP11.06□□□□□ -0.64
SRRT-209ENST00000474896 SERF2P84101 59 aa11.06□□□□□ -0.64
SRRT-209ENST00000474896 ACOT6Q3I5F7 207 aaPredicted RBP11.06□□□□□ -0.64
SRRT-209ENST00000474896 SPATA31B1PQ5VZV4 182 aa11.06□□□□□ -0.64
SRRT-209ENST00000474896 TMEM88Q6PEY1 159 aa11.06□□□□□ -0.64
SRRT-209ENST00000474896 RNF24Q9Y225 148 aa11.06□□□□□ -0.64
SRRT-209ENST00000474896 BOLA2-SMG1P6H3BVE0 249 aa11.05□□□□□ -0.64
SRRT-209ENST00000474896 TPT1P13693 172 aaKnown RBP11.05□□□□□ -0.64
SRRT-209ENST00000474896 M6PRP20645 277 aa11.05□□□□□ -0.64
SRRT-209ENST00000474896 DAD1P61803 113 aa11.05□□□□□ -0.64
SRRT-209ENST00000474896 RRN3P1Q2M238 152 aa11.05□□□□□ -0.64
SRRT-209ENST00000474896 BAP18Q8IXM2 172 aa11.05□□□□□ -0.64
SRRT-209ENST00000474896 STOML3Q8TAV4 291 aa11.05□□□□□ -0.64
SRRT-209ENST00000474896 GPR82Q96P67 336 aa11.05□□□□□ -0.64
SRRT-209ENST00000474896 TRAV5A0A0B4J249 113 aa11.04□□□□□ -0.64
SRRT-209ENST00000474896 A0A0J9YX75 114 aa11.04□□□□□ -0.64
SRRT-209ENST00000474896 ISLRO14498 428 aa11.04□□□□□ -0.64
SRRT-209ENST00000474896 MBP02144 154 aa11.04□□□□□ -0.64
SRRT-209ENST00000474896 RPL7P18124 248 aaKnown RBP11.04□□□□□ -0.64
SRRT-209ENST00000474896 GALR1P47211 349 aa11.04□□□□□ -0.64
SRRT-209ENST00000474896 SLC51BQ86UW2 128 aa11.04□□□□□ -0.64
SRRT-209ENST00000474896 MRPL32Q9BYC8 188 aaKnown RBP11.04□□□□□ -0.64
SRRT-209ENST00000474896 FUT9Q9Y231 359 aa11.04□□□□□ -0.64
SRRT-209ENST00000474896 SEC11BP0C7V7 166 aa11.03□□□□□ -0.64
SRRT-209ENST00000474896 RHOBP62745 196 aa11.03□□□□□ -0.64
SRRT-209ENST00000474896 MIR17HGQ75NE6 70 aa11.03□□□□□ -0.64
SRRT-209ENST00000474896 BPIFA4PQ86YQ2 179 aa11.03□□□□□ -0.64
SRRT-209ENST00000474896 OR10G4Q8NGN3 311 aa11.03□□□□□ -0.64
SRRT-209ENST00000474896 OR10G9Q8NGN4 311 aa11.03□□□□□ -0.64
SRRT-209ENST00000474896 OR10G7Q8NGN6 311 aa11.03□□□□□ -0.64
SRRT-209ENST00000474896 C16orf92Q96LL3 132 aa11.03□□□□□ -0.64
SRRT-209ENST00000474896 C20orf173Q96LM9 149 aa11.03□□□□□ -0.64
SRRT-209ENST00000474896 RPRMQ9NS64 109 aa11.03□□□□□ -0.64
SRRT-209ENST00000474896 MRPS12O15235 138 aaKnown RBP11.02□□□□□ -0.65
SRRT-209ENST00000474896 PRM2P04554 102 aa11.02□□□□□ -0.65
SRRT-209ENST00000474896 FAM122CQ6P4D5 195 aa11.02□□□□□ -0.65
SRRT-209ENST00000474896 FAM167A-AS1Q96KT0 104 aa11.02□□□□□ -0.65
SRRT-209ENST00000474896 TMEM208Q9BTX3 173 aa11.02□□□□□ -0.65
SRRT-209ENST00000474896 SLC25A2Q9BXI2 301 aa11.02□□□□□ -0.65
SRRT-209ENST00000474896 BOLA1Q9Y3E2 137 aa11.02□□□□□ -0.65
SRRT-209ENST00000474896 A0A1W2PPV4 95 aa11.01□□□□□ -0.65
SRRT-209ENST00000474896 EIF3GO75821 320 aaKnown RBP eCLIP11.01□□□□□ -0.65
SRRT-209ENST00000474896 FAM3BP58499 235 aaPredicted RBP11.01□□□□□ -0.65
SRRT-209ENST00000474896 TNP2Q05952 138 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms