RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ACOT6Q3I5F7 207 aaPredicted RBP10.96□□□□□ -0.65
VARS-223ENST00000474643 GCSAMLQ5JQS6 135 aa10.96□□□□□ -0.65
VARS-223ENST00000474643 FFAR4Q5NUL3 377 aa10.96□□□□□ -0.65
VARS-223ENST00000474643 GDF5OSQ5U4N7 250 aa10.96□□□□□ -0.65
VARS-223ENST00000474643 SPATA31B1PQ5VZV4 182 aa10.96□□□□□ -0.65
VARS-223ENST00000474643 C20orf173Q96LM9 149 aa10.96□□□□□ -0.65
VARS-223ENST00000474643 MRPL32Q9BYC8 188 aaKnown RBP10.96□□□□□ -0.65
VARS-223ENST00000474643 H3BTX0 84 aa10.95□□□□□ -0.66
VARS-223ENST00000474643 GIG44P09565 113 aaPredicted RBP10.95□□□□□ -0.66
VARS-223ENST00000474643 RBMY1A1P0DJD3 496 aaKnown RBP10.95□□□□□ -0.66
VARS-223ENST00000474643 RBMY1CP0DJD4 496 aa10.95□□□□□ -0.66
VARS-223ENST00000474643 RAB5CP51148 216 aa10.95□□□□□ -0.66
VARS-223ENST00000474643 RBMY1FQ15415 496 aaKnown RBP10.95□□□□□ -0.66
VARS-223ENST00000474643 DPPA3Q6W0C5 159 aa10.95□□□□□ -0.66
VARS-223ENST00000474643 Q6ZTC4 211 aa10.95□□□□□ -0.66
VARS-223ENST00000474643 SLC50A1Q9BRV3 221 aa10.95□□□□□ -0.66
VARS-223ENST00000474643 TRAV8-2A0A0B4J237 113 aa10.94□□□□□ -0.66
VARS-223ENST00000474643 A0A0J9YX75 114 aa10.94□□□□□ -0.66
VARS-223ENST00000474643 MRPS12O15235 138 aaKnown RBP10.94□□□□□ -0.66
VARS-223ENST00000474643 DUSP14O95147 198 aaKnown RBP10.94□□□□□ -0.66
VARS-223ENST00000474643 EMP1P54849 157 aa10.94□□□□□ -0.66
VARS-223ENST00000474643 FXYD7P58549 80 aa10.94□□□□□ -0.66
VARS-223ENST00000474643 RHOBP62745 196 aa10.94□□□□□ -0.66
VARS-223ENST00000474643 PSG3Q16557 428 aa10.94□□□□□ -0.66
VARS-223ENST00000474643 C17orf77Q96MU5 243 aa10.94□□□□□ -0.66
VARS-223ENST00000474643 PPP1R14DQ9NXH3 145 aa10.94□□□□□ -0.66
VARS-223ENST00000474643 BOLA2-SMG1P6H3BVE0 249 aa10.93□□□□□ -0.66
VARS-223ENST00000474643 NKX2-5P52952 324 aaPredicted RBP10.93□□□□□ -0.66
VARS-223ENST00000474643 PSG9Q00887 426 aa10.93□□□□□ -0.66
VARS-223ENST00000474643 GUK1Q16774 197 aa10.93□□□□□ -0.66
VARS-223ENST00000474643 MIR17HGQ75NE6 70 aa10.93□□□□□ -0.66
VARS-223ENST00000474643 FUT9Q9Y231 359 aa10.93□□□□□ -0.66
VARS-223ENST00000474643 X6R8D5 127 aa10.93□□□□□ -0.66
VARS-223ENST00000474643 KMT2AQ03164 3969 aa10.93□□□□□ -0.66
VARS-223ENST00000474643 BIRC6Q9NR09 4857 aa10.93□□□□□ -0.66
VARS-223ENST00000474643 ZNF705DP0CH99 300 aaPredicted RBP10.92□□□□□ -0.66
VARS-223ENST00000474643 ZNF705BP0CI00 300 aaPredicted RBP10.92□□□□□ -0.66
VARS-223ENST00000474643 IGLC2P0DOY2 106 aa10.92□□□□□ -0.66
VARS-223ENST00000474643 TAS2R45P59539 299 aa10.92□□□□□ -0.66
VARS-223ENST00000474643 HIST1H1AQ02539 215 aaPredicted RBP10.92□□□□□ -0.66
VARS-223ENST00000474643 AKR1C8PQ5T2L2 129 aa10.92□□□□□ -0.66
VARS-223ENST00000474643 ZNF767PQ75MW2 155 aa10.92□□□□□ -0.66
VARS-223ENST00000474643 BLNKQ8WV28 456 aa10.92□□□□□ -0.66
VARS-223ENST00000474643 RPUSD4Q96CM3 377 aaKnown RBP10.92□□□□□ -0.66
VARS-223ENST00000474643 SH3BGRL3Q9H299 93 aa10.92□□□□□ -0.66
VARS-223ENST00000474643 ZNF331Q9NQX6 463 aaPredicted RBP10.92□□□□□ -0.66
VARS-223ENST00000474643 TMEM14CQ9P0S9 112 aa10.92□□□□□ -0.66
VARS-223ENST00000474643 GOLT1BQ9Y3E0 138 aa10.92□□□□□ -0.66
VARS-223ENST00000474643 IGHV4-4A0A075B6R2 117 aa10.91□□□□□ -0.66
VARS-223ENST00000474643 DEFB131BA0A096LNP1 70 aa10.91□□□□□ -0.66
VARS-223ENST00000474643 TMEM189A5PLL7 270 aa10.91□□□□□ -0.66
VARS-223ENST00000474643 H3BQ15 152 aa10.91□□□□□ -0.66
VARS-223ENST00000474643 SLC17A3O00476 420 aa10.91□□□□□ -0.66
VARS-223ENST00000474643 OR7C2O60412 319 aa10.91□□□□□ -0.66
VARS-223ENST00000474643 PYYP10082 97 aa10.91□□□□□ -0.66
VARS-223ENST00000474643 HIST1H1EP10412 219 aaKnown RBP10.91□□□□□ -0.66
VARS-223ENST00000474643 CNN1P51911 297 aaKnown RBP10.91□□□□□ -0.66
VARS-223ENST00000474643 CSNK1G2-AS1Q8NCQ2 148 aa10.91□□□□□ -0.66
VARS-223ENST00000474643 OR10G4Q8NGN3 311 aa10.91□□□□□ -0.66
VARS-223ENST00000474643 OR10G9Q8NGN4 311 aa10.91□□□□□ -0.66
VARS-223ENST00000474643 OR10G7Q8NGN6 311 aa10.91□□□□□ -0.66
VARS-223ENST00000474643 TMEM208Q9BTX3 173 aa10.91□□□□□ -0.66
VARS-223ENST00000474643 ACTR3CQ9C0K3 210 aaPredicted RBP10.91□□□□□ -0.66
VARS-223ENST00000474643 SLC35B3Q9H1N7 401 aa10.91□□□□□ -0.66
VARS-223ENST00000474643 ZNF586Q9NXT0 402 aa10.91□□□□□ -0.66
VARS-223ENST00000474643 A0A1W2PPV4 95 aa10.9□□□□□ -0.66
VARS-223ENST00000474643 SPART-AS1P0CW21 52 aa10.9□□□□□ -0.66
VARS-223ENST00000474643 PRB4P10163 310 aaPredicted RBP10.9□□□□□ -0.66
VARS-223ENST00000474643 PQLC2Q6ZP29 291 aa10.9□□□□□ -0.66
VARS-223ENST00000474643 OR10J6PQ8NGY7 276 aa10.9□□□□□ -0.66
VARS-223ENST00000474643 CLUHP3Q96NS8 147 aa10.9□□□□□ -0.66
VARS-223ENST00000474643 PAXXQ9BUH6 204 aa10.9□□□□□ -0.66
VARS-223ENST00000474643 SLC25A2Q9BXI2 301 aa10.9□□□□□ -0.66
VARS-223ENST00000474643 OR51M1Q9H341 326 aa10.9□□□□□ -0.66
VARS-223ENST00000474643 CELA1Q9UNI1 258 aa10.9□□□□□ -0.66
VARS-223ENST00000474643 RFNGQ9Y644 331 aa10.9□□□□□ -0.66
VARS-223ENST00000474643 TEX48A0A1B0GUV7 120 aa10.89□□□□□ -0.67
VARS-223ENST00000474643 ZNF705FA8MVS1 300 aaPredicted RBP10.89□□□□□ -0.67
VARS-223ENST00000474643 SULT1A2P50226 295 aa10.89□□□□□ -0.67
VARS-223ENST00000474643 RAB2AP61019 212 aa10.89□□□□□ -0.67
VARS-223ENST00000474643 KHDC3LQ587J8 217 aa10.89□□□□□ -0.67
VARS-223ENST00000474643 OR8A1Q8NGG7 326 aa10.89□□□□□ -0.67
VARS-223ENST00000474643 TMED6Q8WW62 240 aa10.89□□□□□ -0.67
VARS-223ENST00000474643 NDUFAF3Q9BU61 184 aa10.89□□□□□ -0.67
VARS-223ENST00000474643 AAMDCQ9H7C9 122 aa10.89□□□□□ -0.67
VARS-223ENST00000474643 APLNQ9ULZ1 77 aa10.89□□□□□ -0.67
VARS-223ENST00000474643 FRAS1Q86XX4 4008 aa10.88□□□□□ -0.67
VARS-223ENST00000474643 TRBV19A0A075B6N1 114 aa10.88□□□□□ -0.67
VARS-223ENST00000474643 CTXND1A0A1B0GTU2 59 aa10.88□□□□□ -0.67
VARS-223ENST00000474643 SMIM9A6NGZ8 99 aa10.88□□□□□ -0.67
VARS-223ENST00000474643 ZNF253O75346 499 aa10.88□□□□□ -0.67
VARS-223ENST00000474643 HBE1P02100 147 aa10.88□□□□□ -0.67
VARS-223ENST00000474643 OR10J4P0C629 311 aa10.88□□□□□ -0.67
VARS-223ENST00000474643 CDC34P49427 236 aaPredicted RBP10.88□□□□□ -0.67
VARS-223ENST00000474643 FAM122CQ6P4D5 195 aa10.88□□□□□ -0.67
VARS-223ENST00000474643 SAT2Q96F10 170 aaPredicted RBP10.88□□□□□ -0.67
VARS-223ENST00000474643 FAM167A-AS1Q96KT0 104 aa10.88□□□□□ -0.67
VARS-223ENST00000474643 M0R2Z0 102 aa10.87□□□□□ -0.67
VARS-223ENST00000474643 AMBPP02760 352 aa10.87□□□□□ -0.67
VARS-223ENST00000474643 NBEAP1P0C6P0 100 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms