RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 C4BPBP20851 252 aa9.09□□□□□ -0.95
DDX56-209ENST00000473924 CNN1P51911 297 aaKnown RBP9.09□□□□□ -0.95
DDX56-209ENST00000473924 FXYD7P58549 80 aa9.09□□□□□ -0.95
DDX56-209ENST00000473924 OR8A1Q8NGG7 326 aa9.09□□□□□ -0.95
DDX56-209ENST00000473924 RAB24Q969Q5 203 aa9.09□□□□□ -0.95
DDX56-209ENST00000473924 ZNF503Q96F45 646 aa9.09□□□□□ -0.95
DDX56-209ENST00000473924 CLUHP3Q96NS8 147 aa9.09□□□□□ -0.95
DDX56-209ENST00000473924 PRELID1Q9Y255 219 aa9.09□□□□□ -0.95
DDX56-209ENST00000473924 RANP62826 216 aaKnown RBP9.08□□□□□ -0.96
DDX56-209ENST00000473924 ICAM4Q14773 271 aa9.08□□□□□ -0.96
DDX56-209ENST00000473924 LGALSLQ3ZCW2 172 aaPredicted RBP9.08□□□□□ -0.96
DDX56-209ENST00000473924 ZFP69Q49AA0 526 aa9.08□□□□□ -0.96
DDX56-209ENST00000473924 EXOC3-AS1Q8N2X6 119 aa9.08□□□□□ -0.96
DDX56-209ENST00000473924 OR10J6PQ8NGY7 276 aa9.08□□□□□ -0.96
DDX56-209ENST00000473924 PHYHIPLQ96FC7 376 aa9.08□□□□□ -0.96
DDX56-209ENST00000473924 SLC35B3Q9H1N7 401 aa9.08□□□□□ -0.96
DDX56-209ENST00000473924 XCL2Q9UBD3 114 aa9.08□□□□□ -0.96
DDX56-209ENST00000473924 M0R3E3 92 aa9.07□□□□□ -0.96
DDX56-209ENST00000473924 GIG44P09565 113 aaPredicted RBP9.07□□□□□ -0.96
DDX56-209ENST00000473924 SEC11BP0C7V7 166 aa9.07□□□□□ -0.96
DDX56-209ENST00000473924 STAG3L2P0CL84 134 aa9.07□□□□□ -0.96
DDX56-209ENST00000473924 STAG3L3P0CL85 134 aa9.07□□□□□ -0.96
DDX56-209ENST00000473924 ARL14EPLP0DKL9 152 aa9.07□□□□□ -0.96
DDX56-209ENST00000473924 TPT1P13693 172 aaKnown RBP9.07□□□□□ -0.96
DDX56-209ENST00000473924 CD300CQ08708 224 aa9.07□□□□□ -0.96
DDX56-209ENST00000473924 IQCF2Q8IXL9 164 aa9.07□□□□□ -0.96
DDX56-209ENST00000473924 LYPD1Q8N2G4 141 aa9.07□□□□□ -0.96
DDX56-209ENST00000473924 MRPL53Q96EL3 112 aaKnown RBP9.07□□□□□ -0.96
DDX56-209ENST00000473924 RARRES2Q99969 163 aa9.07□□□□□ -0.96
DDX56-209ENST00000473924 NBEAL2Q6ZNJ1 2754 aa9.07□□□□□ -0.96
DDX56-209ENST00000473924 CTXND1A0A1B0GTU2 59 aa9.06□□□□□ -0.96
DDX56-209ENST00000473924 PRAC2D3DTV9 90 aa9.06□□□□□ -0.96
DDX56-209ENST00000473924 CXorf1O96002 111 aa9.06□□□□□ -0.96
DDX56-209ENST00000473924 CSN1S1P47710 185 aa9.06□□□□□ -0.96
DDX56-209ENST00000473924 FAM74A1Q5RGS3 127 aa9.06□□□□□ -0.96
DDX56-209ENST00000473924 BAP18Q8IXM2 172 aa9.06□□□□□ -0.96
DDX56-209ENST00000473924 OR11H2Q8NH07 326 aa9.06□□□□□ -0.96
DDX56-209ENST00000473924 WWC2-AS2Q96NR7 200 aa9.06□□□□□ -0.96
DDX56-209ENST00000473924 Q9H3A6 140 aa9.06□□□□□ -0.96
DDX56-209ENST00000473924 A8MTW9 85 aa9.05□□□□□ -0.96
DDX56-209ENST00000473924 BOLA2-SMG1P6H3BVE0 249 aa9.05□□□□□ -0.96
DDX56-209ENST00000473924 AMBPP02760 352 aa9.05□□□□□ -0.96
DDX56-209ENST00000473924 GCHFRP30047 84 aa9.05□□□□□ -0.96
DDX56-209ENST00000473924 SPINK13Q1W4C9 94 aa9.05□□□□□ -0.96
DDX56-209ENST00000473924 AMTNQ6UX39 209 aa9.05□□□□□ -0.96
DDX56-209ENST00000473924 IGHV3OR16-12A0A075B7B8 117 aa9.04□□□□□ -0.96
DDX56-209ENST00000473924 UMAD1C9J7I0 102 aa9.04□□□□□ -0.96
DDX56-209ENST00000473924 M0R2Z0 102 aa9.04□□□□□ -0.96
DDX56-209ENST00000473924 ZNF726P1Q15940 193 aa9.04□□□□□ -0.96
DDX56-209ENST00000473924 EIF5AL1Q6IS14 154 aaKnown RBP9.04□□□□□ -0.96
DDX56-209ENST00000473924 SSX7Q7RTT5 188 aa9.04□□□□□ -0.96
DDX56-209ENST00000473924 CSNK1G2-AS1Q8NCQ2 148 aa9.04□□□□□ -0.96
DDX56-209ENST00000473924 STOML3Q8TAV4 291 aa9.04□□□□□ -0.96
DDX56-209ENST00000473924 CMTM2Q8TAZ6 248 aa9.04□□□□□ -0.96
DDX56-209ENST00000473924 TMED6Q8WW62 240 aa9.04□□□□□ -0.96
DDX56-209ENST00000473924 TMEM167BQ9NRX6 74 aa9.04□□□□□ -0.96
DDX56-209ENST00000473924 TENM3Q9P273 2699 aa9.04□□□□□ -0.96
DDX56-209ENST00000473924 PGPA6NDG6 321 aa9.03□□□□□ -0.96
DDX56-209ENST00000473924 NPIPB6E9PJ23 425 aa9.03□□□□□ -0.96
DDX56-209ENST00000473924 INSP01308 110 aa9.03□□□□□ -0.96
DDX56-209ENST00000473924 TSPOP30536 169 aa9.03□□□□□ -0.96
DDX56-209ENST00000473924 C9orf62Q8N4C0 152 aa9.03□□□□□ -0.96
DDX56-209ENST00000473924 FAM213BQ8TBF2 198 aa9.03□□□□□ -0.96
DDX56-209ENST00000473924 RXFP4Q8TDU9 374 aa9.03□□□□□ -0.96
DDX56-209ENST00000473924 IGF2BP2-AS1Q96M15 143 aa9.03□□□□□ -0.96
DDX56-209ENST00000473924 TMEM208Q9BTX3 173 aa9.03□□□□□ -0.96
DDX56-209ENST00000473924 OTORQ9NRC9 128 aa9.03□□□□□ -0.96
DDX56-209ENST00000473924 RPH3ALQ9UNE2 315 aa9.03□□□□□ -0.96
DDX56-209ENST00000473924 GOLT1BQ9Y3E0 138 aa9.03□□□□□ -0.96
DDX56-209ENST00000473924 DNAH9Q9NYC9 4486 aa9.03□□□□□ -0.96
DDX56-209ENST00000473924 TRAV12-2A0A075B6T6 113 aa9.02□□□□□ -0.97
DDX56-209ENST00000473924 IGKV2-40A0A087WW87 121 aaPredicted RBP9.02□□□□□ -0.97
DDX56-209ENST00000473924 A0A0J9YWU9 116 aa9.02□□□□□ -0.97
DDX56-209ENST00000473924 MAP1LC3B2A6NCE7 125 aa9.02□□□□□ -0.97
DDX56-209ENST00000473924 IGKV2D-40P01614 121 aaPredicted RBP9.02□□□□□ -0.97
DDX56-209ENST00000473924 CDKN1BP46527 198 aa9.02□□□□□ -0.97
DDX56-209ENST00000473924 FHITP49789 147 aa9.02□□□□□ -0.97
DDX56-209ENST00000473924 FGF8P55075 233 aaPredicted RBP9.02□□□□□ -0.97
DDX56-209ENST00000473924 ERCC8Q13216 396 aa9.02□□□□□ -0.97
DDX56-209ENST00000473924 TMEM78Q5T7P6 136 aa9.02□□□□□ -0.97
DDX56-209ENST00000473924 SLC51BQ86UW2 128 aa9.02□□□□□ -0.97
DDX56-209ENST00000473924 LINC00477Q96M19 166 aa9.02□□□□□ -0.97
DDX56-209ENST00000473924 MAP1LC3BQ9GZQ8 125 aa9.02□□□□□ -0.97
DDX56-209ENST00000473924 EDA2RQ9HAV5 297 aa9.02□□□□□ -0.97
DDX56-209ENST00000473924 ZNF705EA8MWA4 302 aaPredicted RBP9.01□□□□□ -0.97
DDX56-209ENST00000473924 J3KRW8 73 aa9.01□□□□□ -0.97
DDX56-209ENST00000473924 SLC25A5P05141 298 aaKnown RBP9.01□□□□□ -0.97
DDX56-209ENST00000473924 CT45A10P0DMU9 189 aa9.01□□□□□ -0.97
DDX56-209ENST00000473924 MIFP14174 115 aa9.01□□□□□ -0.97
DDX56-209ENST00000473924 LEPP41159 167 aa9.01□□□□□ -0.97
DDX56-209ENST00000473924 DPPA3Q6W0C5 159 aa9.01□□□□□ -0.97
DDX56-209ENST00000473924 SUN5Q8TC36 379 aa9.01□□□□□ -0.97
DDX56-209ENST00000473924 SFT2D1Q8WV19 159 aa9.01□□□□□ -0.97
DDX56-209ENST00000473924 AGPAT4-IT1Q9H0P7 198 aa9.01□□□□□ -0.97
DDX56-209ENST00000473924 TMPRSS5Q9H3S3 457 aa9.01□□□□□ -0.97
DDX56-209ENST00000473924 PLA2G2EQ9NZK7 142 aa9.01□□□□□ -0.97
DDX56-209ENST00000473924 X6R8D5 127 aa9.01□□□□□ -0.97
DDX56-209ENST00000473924 STAB2Q8WWQ8 2551 aa9□□□□□ -0.97
DDX56-209ENST00000473924 DIRC3C9JPN6 131 aa9□□□□□ -0.97
DDX56-209ENST00000473924 DEFB4AO15263 64 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms