RNA–Protein interactions for RNA: ENST00000473894.1

RAB4A-202, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB4A, Length 708 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-202ENST00000473894 TEX261Q6UWH6 196 aa13.07□□□□□ -0.32
RAB4A-202ENST00000473894 TRPT1Q86TN4 253 aaKnown RBP13.07□□□□□ -0.32
RAB4A-202ENST00000473894 EXOC3-AS1Q8N2X6 119 aa13.07□□□□□ -0.32
RAB4A-202ENST00000473894 RPUSD4Q96CM3 377 aaKnown RBP13.07□□□□□ -0.32
RAB4A-202ENST00000473894 Q9H3A6 140 aa13.07□□□□□ -0.32
RAB4A-202ENST00000473894 TUBA4BQ9H853 241 aa13.07□□□□□ -0.32
RAB4A-202ENST00000473894 KNCNA6PVL3 124 aa13.06□□□□□ -0.32
RAB4A-202ENST00000473894 FRMD6-AS1P0C7T7 363 aa13.06□□□□□ -0.32
RAB4A-202ENST00000473894 FGF8P55075 233 aaPredicted RBP13.06□□□□□ -0.32
RAB4A-202ENST00000473894 PMS2P11Q13670 270 aa13.06□□□□□ -0.32
RAB4A-202ENST00000473894 ICAM4Q14773 271 aa13.06□□□□□ -0.32
RAB4A-202ENST00000473894 GDF5OSQ5U4N7 250 aa13.06□□□□□ -0.32
RAB4A-202ENST00000473894 ZNF738Q8NE65 137 aa13.06□□□□□ -0.32
RAB4A-202ENST00000473894 TMPRSS5Q9H3S3 457 aa13.06□□□□□ -0.32
RAB4A-202ENST00000473894 LOC102724200A0A096LPH7 203 aaPredicted RBP13.05□□□□□ -0.32
RAB4A-202ENST00000473894 KIR2DL5BA0A0G2JN68 375 aa13.05□□□□□ -0.32
RAB4A-202ENST00000473894 KIR2DL5BA0A0G2JPC4 375 aa13.05□□□□□ -0.32
RAB4A-202ENST00000473894 ACTL10Q5JWF8 245 aa13.05□□□□□ -0.32
RAB4A-202ENST00000473894 EBLN2Q6P2I7 272 aa13.05□□□□□ -0.32
RAB4A-202ENST00000473894 STHQ8IWL8 128 aa13.05□□□□□ -0.32
RAB4A-202ENST00000473894 KIR2DL5AQ8N109 375 aa13.05□□□□□ -0.32
RAB4A-202ENST00000473894 OR8A1Q8NGG7 326 aa13.05□□□□□ -0.32
RAB4A-202ENST00000473894 KIR2DL5BQ8NHK3 375 aa13.05□□□□□ -0.32
RAB4A-202ENST00000473894 LYPD6BQ8NI32 183 aa13.05□□□□□ -0.32
RAB4A-202ENST00000473894 NKX6-2Q9C056 277 aaPredicted RBP13.05□□□□□ -0.32
RAB4A-202ENST00000473894 ZNF705FA8MVS1 300 aaPredicted RBP13.04□□□□□ -0.32
RAB4A-202ENST00000473894 ZNF705EA8MWA4 302 aaPredicted RBP13.04□□□□□ -0.32
RAB4A-202ENST00000473894 F6UB75 175 aa13.04□□□□□ -0.32
RAB4A-202ENST00000473894 M0R3E3 92 aa13.04□□□□□ -0.32
RAB4A-202ENST00000473894 HBE1P02100 147 aa13.04□□□□□ -0.32
RAB4A-202ENST00000473894 DEFB1P60022 68 aa13.04□□□□□ -0.32
RAB4A-202ENST00000473894 ZNF680Q8NEM1 530 aa13.04□□□□□ -0.32
RAB4A-202ENST00000473894 RXFP4Q8TDU9 374 aa13.04□□□□□ -0.32
RAB4A-202ENST00000473894 FAM74A7A6NL05 159 aa13.03□□□□□ -0.32
RAB4A-202ENST00000473894 PRAC2D3DTV9 90 aa13.03□□□□□ -0.32
RAB4A-202ENST00000473894 TEX46H3BTG2 121 aa13.03□□□□□ -0.32
RAB4A-202ENST00000473894 DUSP14O95147 198 aaKnown RBP13.03□□□□□ -0.32
RAB4A-202ENST00000473894 PPT1P50897 306 aa13.03□□□□□ -0.32
RAB4A-202ENST00000473894 BLOC1S1P78537 153 aa13.03□□□□□ -0.32
RAB4A-202ENST00000473894 DEFB121Q5J5C9 76 aa13.03□□□□□ -0.32
RAB4A-202ENST00000473894 PGPA6NDG6 321 aa13.02□□□□□ -0.33
RAB4A-202ENST00000473894 GGTLC3B5MD39 225 aa13.02□□□□□ -0.33
RAB4A-202ENST00000473894 IFNA7P01567 189 aa13.02□□□□□ -0.33
RAB4A-202ENST00000473894 MORN3Q6PF18 240 aaPredicted RBP13.02□□□□□ -0.33
RAB4A-202ENST00000473894 AMTNQ6UX39 209 aa13.02□□□□□ -0.33
RAB4A-202ENST00000473894 CCDC28AQ8IWP9 274 aa13.02□□□□□ -0.33
RAB4A-202ENST00000473894 IQCF2Q8IXL9 164 aa13.02□□□□□ -0.33
RAB4A-202ENST00000473894 C5orf17Q8NAS9 161 aa13.02□□□□□ -0.33
RAB4A-202ENST00000473894 B9D2Q9BPU9 175 aa13.02□□□□□ -0.33
RAB4A-202ENST00000473894 YTHDF2Q9Y5A9 579 aaKnown RBP13.02□□□□□ -0.33
RAB4A-202ENST00000473894 RBAKDNA6NC62 111 aa13.01□□□□□ -0.33
RAB4A-202ENST00000473894 NPIPB6E9PJ23 425 aa13.01□□□□□ -0.33
RAB4A-202ENST00000473894 UBE2CO00762 179 aa13.01□□□□□ -0.33
RAB4A-202ENST00000473894 SLC25A5P05141 298 aaKnown RBP13.01□□□□□ -0.33
RAB4A-202ENST00000473894 CSN1S1P47710 185 aa13.01□□□□□ -0.33
RAB4A-202ENST00000473894 CNN1P51911 297 aaKnown RBP13.01□□□□□ -0.33
RAB4A-202ENST00000473894 APOC4P55056 127 aa13.01□□□□□ -0.33
RAB4A-202ENST00000473894 CCL20P78556 96 aa13.01□□□□□ -0.33
RAB4A-202ENST00000473894 C9orf47Q6ZRZ4 202 aa13.01□□□□□ -0.33
RAB4A-202ENST00000473894 TCEAL7Q9BRU2 100 aa13.01□□□□□ -0.33
RAB4A-202ENST00000473894 NBEAL2Q6ZNJ1 2754 aa13□□□□□ -0.33
RAB4A-202ENST00000473894 DIRC3C9JPN6 131 aa13□□□□□ -0.33
RAB4A-202ENST00000473894 GIG44P09565 113 aaPredicted RBP13□□□□□ -0.33
RAB4A-202ENST00000473894 HAGHQ16775 308 aa13□□□□□ -0.33
RAB4A-202ENST00000473894 OR10J6PQ8NGY7 276 aa13□□□□□ -0.33
RAB4A-202ENST00000473894 ODF3Q96PU9 254 aa13□□□□□ -0.33
RAB4A-202ENST00000473894 CSTL1Q9H114 145 aa13□□□□□ -0.33
RAB4A-202ENST00000473894 PPP1R14DQ9NXH3 145 aa13□□□□□ -0.33
RAB4A-202ENST00000473894 SERTM2A0A1B0GWG4 89 aa12.99□□□□□ -0.33
RAB4A-202ENST00000473894 RPL35AP18077 110 aaKnown RBP12.99□□□□□ -0.33
RAB4A-202ENST00000473894 SUMO1P63165 101 aaKnown RBP12.99□□□□□ -0.33
RAB4A-202ENST00000473894 HIST1H1AQ02539 215 aaPredicted RBP12.99□□□□□ -0.33
RAB4A-202ENST00000473894 CMTM2Q8TAZ6 248 aa12.99□□□□□ -0.33
RAB4A-202ENST00000473894 LINC00477Q96M19 166 aa12.99□□□□□ -0.33
RAB4A-202ENST00000473894 MANBALQ9NQG1 85 aa12.99□□□□□ -0.33
RAB4A-202ENST00000473894 ZNF705DP0CH99 300 aaPredicted RBP12.98□□□□□ -0.33
RAB4A-202ENST00000473894 ZNF705BP0CI00 300 aaPredicted RBP12.98□□□□□ -0.33
RAB4A-202ENST00000473894 UBE2G2P60604 165 aa12.98□□□□□ -0.33
RAB4A-202ENST00000473894 NUTF2P61970 127 aaKnown RBP12.98□□□□□ -0.33
RAB4A-202ENST00000473894 SBSPONQ8IVN8 264 aa12.98□□□□□ -0.33
RAB4A-202ENST00000473894 OR4B1Q8NGF8 309 aa12.98□□□□□ -0.33
RAB4A-202ENST00000473894 AGPAT4-IT1Q9H0P7 198 aa12.98□□□□□ -0.33
RAB4A-202ENST00000473894 EPDR1Q9UM22 224 aa12.98□□□□□ -0.33
RAB4A-202ENST00000473894 DNAH9Q9NYC9 4486 aa12.97□□□□□ -0.33
RAB4A-202ENST00000473894 TRBV7-9A0A0J9YWB2 115 aa12.97□□□□□ -0.33
RAB4A-202ENST00000473894 A0A1B0GV50 99 aa12.97□□□□□ -0.33
RAB4A-202ENST00000473894 PAGE4O60829 102 aa12.97□□□□□ -0.33
RAB4A-202ENST00000473894 TCRAP04437 139 aa12.97□□□□□ -0.33
RAB4A-202ENST00000473894 Q6ZWC4 215 aa12.97□□□□□ -0.33
RAB4A-202ENST00000473894 FAM19A4Q96LR4 140 aa12.97□□□□□ -0.33
RAB4A-202ENST00000473894 TXNDC17Q9BRA2 123 aa12.97□□□□□ -0.33
RAB4A-202ENST00000473894 TM2D3Q9BRN9 247 aa12.97□□□□□ -0.33
RAB4A-202ENST00000473894 IGKV2-40A0A087WW87 121 aaPredicted RBP12.96□□□□□ -0.33
RAB4A-202ENST00000473894 IGKV2D-40P01614 121 aaPredicted RBP12.96□□□□□ -0.33
RAB4A-202ENST00000473894 CT45A10P0DMU9 189 aa12.96□□□□□ -0.33
RAB4A-202ENST00000473894 TAGLN2P37802 199 aaKnown RBP12.96□□□□□ -0.33
RAB4A-202ENST00000473894 HIST1H2BAQ96A08 127 aa12.96□□□□□ -0.33
RAB4A-202ENST00000473894 VGLL1Q99990 258 aa12.96□□□□□ -0.33
RAB4A-202ENST00000473894 ATG101Q9BSB4 218 aa12.96□□□□□ -0.33
RAB4A-202ENST00000473894 FBLL1A6NHQ2 334 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms