RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 ANKRD65E5RJM6 399 aa9.36□□□□□ -0.91
SMURF1-203ENST00000472627 SPINK4O60575 86 aa9.36□□□□□ -0.91
SMURF1-203ENST00000472627 PRAF2O60831 178 aa9.36□□□□□ -0.91
SMURF1-203ENST00000472627 ORM1P02763 201 aa9.36□□□□□ -0.91
SMURF1-203ENST00000472627 AKAIN1P0CW23 69 aa9.36□□□□□ -0.91
SMURF1-203ENST00000472627 PLP1P60201 277 aa9.36□□□□□ -0.91
SMURF1-203ENST00000472627 EIF4E3Q8N5X7 224 aaKnown RBP9.36□□□□□ -0.91
SMURF1-203ENST00000472627 C8orf49Q96NF6 230 aa9.36□□□□□ -0.91
SMURF1-203ENST00000472627 VGLL1Q99990 258 aa9.36□□□□□ -0.91
SMURF1-203ENST00000472627 SCP2D1Q9UJQ7 156 aa9.36□□□□□ -0.91
SMURF1-203ENST00000472627 RCL1Q9Y2P8 373 aaKnown RBP9.36□□□□□ -0.91
SMURF1-203ENST00000472627 TRGV4A0A0C4DH28 118 aa9.35□□□□□ -0.91
SMURF1-203ENST00000472627 PRB4P10163 310 aaPredicted RBP9.35□□□□□ -0.91
SMURF1-203ENST00000472627 TCL1AP56279 114 aa9.35□□□□□ -0.91
SMURF1-203ENST00000472627 ZNF415Q09FC8 603 aa9.35□□□□□ -0.91
SMURF1-203ENST00000472627 ANXA2RQ3ZCQ2 193 aa9.35□□□□□ -0.91
SMURF1-203ENST00000472627 SPANXN5Q5MJ07 72 aa9.35□□□□□ -0.91
SMURF1-203ENST00000472627 IBA57Q5T440 356 aaKnown RBP9.35□□□□□ -0.91
SMURF1-203ENST00000472627 PXDC1Q5TGL8 231 aa9.35□□□□□ -0.91
SMURF1-203ENST00000472627 BPIFA4PQ86YQ2 179 aa9.35□□□□□ -0.91
SMURF1-203ENST00000472627 C11orf72Q8NBR9 251 aa9.35□□□□□ -0.91
SMURF1-203ENST00000472627 ZNF431Q8TF32 576 aaPredicted RBP9.35□□□□□ -0.91
SMURF1-203ENST00000472627 ARL6Q9H0F7 186 aa9.35□□□□□ -0.91
SMURF1-203ENST00000472627 STRAPQ9Y3F4 350 aaKnown RBP9.35□□□□□ -0.91
SMURF1-203ENST00000472627 C7orf71A4D174 169 aa9.34□□□□□ -0.91
SMURF1-203ENST00000472627 PRSS46E5RG02 174 aa9.34□□□□□ -0.91
SMURF1-203ENST00000472627 E5RGE8 158 aa9.34□□□□□ -0.91
SMURF1-203ENST00000472627 WRBO00258 174 aa9.34□□□□□ -0.91
SMURF1-203ENST00000472627 SYNGR2O43760 224 aa9.34□□□□□ -0.91
SMURF1-203ENST00000472627 SLC25A6P12236 298 aa9.34□□□□□ -0.91
SMURF1-203ENST00000472627 TDRG1Q3Y452 100 aa9.34□□□□□ -0.91
SMURF1-203ENST00000472627 Q6ZSA8 131 aa9.34□□□□□ -0.91
SMURF1-203ENST00000472627 YIPF6Q96EC8 236 aa9.34□□□□□ -0.91
SMURF1-203ENST00000472627 ARPC5LQ9BPX5 153 aa9.34□□□□□ -0.91
SMURF1-203ENST00000472627 MRPL32Q9BYC8 188 aaKnown RBP9.34□□□□□ -0.91
SMURF1-203ENST00000472627 ARV1Q9H2C2 271 aa9.34□□□□□ -0.91
SMURF1-203ENST00000472627 K7EQD1 137 aa9.33□□□□□ -0.92
SMURF1-203ENST00000472627 RS1O15537 224 aa9.33□□□□□ -0.92
SMURF1-203ENST00000472627 PITX3O75364 302 aa9.33□□□□□ -0.92
SMURF1-203ENST00000472627 CT45A10P0DMU9 189 aa9.33□□□□□ -0.92
SMURF1-203ENST00000472627 SH2D6Q7Z4S9 175 aa9.33□□□□□ -0.92
SMURF1-203ENST00000472627 CLVS1Q8IUQ0 354 aaPredicted RBP9.33□□□□□ -0.92
SMURF1-203ENST00000472627 IGHV3-38A0A0C4DH36 116 aa9.32□□□□□ -0.92
SMURF1-203ENST00000472627 C9JCJ5 164 aa9.32□□□□□ -0.92
SMURF1-203ENST00000472627 PRAC2D3DTV9 90 aa9.32□□□□□ -0.92
SMURF1-203ENST00000472627 RGS13O14921 159 aa9.32□□□□□ -0.92
SMURF1-203ENST00000472627 MPDU1O75352 247 aa9.32□□□□□ -0.92
SMURF1-203ENST00000472627 NCS1P62166 190 aa9.32□□□□□ -0.92
SMURF1-203ENST00000472627 ASAH1Q13510 395 aa9.32□□□□□ -0.92
SMURF1-203ENST00000472627 GUK1Q16774 197 aa9.32□□□□□ -0.92
SMURF1-203ENST00000472627 C4orf46Q504U0 113 aa9.32□□□□□ -0.92
SMURF1-203ENST00000472627 TEPPQ6URK8 271 aa9.32□□□□□ -0.92
SMURF1-203ENST00000472627 LINC00305Q7Z4B0 112 aa9.32□□□□□ -0.92
SMURF1-203ENST00000472627 TM2D2Q9BX73 214 aa9.32□□□□□ -0.92
SMURF1-203ENST00000472627 MRPL16Q9NX20 251 aaKnown RBP9.32□□□□□ -0.92
SMURF1-203ENST00000472627 KLF12Q9Y4X4 402 aa9.32□□□□□ -0.92
SMURF1-203ENST00000472627 H3BP45 60 aa9.31□□□□□ -0.92
SMURF1-203ENST00000472627 MRPS12O15235 138 aaKnown RBP9.31□□□□□ -0.92
SMURF1-203ENST00000472627 GYPEP15421 78 aa9.31□□□□□ -0.92
SMURF1-203ENST00000472627 PPT1P50897 306 aa9.31□□□□□ -0.92
SMURF1-203ENST00000472627 FHL2Q14192 279 aa9.31□□□□□ -0.92
SMURF1-203ENST00000472627 ZNF546Q86UE3 836 aa9.31□□□□□ -0.92
SMURF1-203ENST00000472627 Q9HAA7 133 aa9.31□□□□□ -0.92
SMURF1-203ENST00000472627 TRAV8-6A0A0B4J262 113 aa9.3□□□□□ -0.92
SMURF1-203ENST00000472627 LINC00854A0A1B0GVQ3 168 aa9.3□□□□□ -0.92
SMURF1-203ENST00000472627 IBA57-AS1B1ANH7 110 aa9.3□□□□□ -0.92
SMURF1-203ENST00000472627 GOSR2O14653 212 aa9.3□□□□□ -0.92
SMURF1-203ENST00000472627 COX7A2P2O60397 106 aa9.3□□□□□ -0.92
SMURF1-203ENST00000472627 VBP1P61758 197 aa9.3□□□□□ -0.92
SMURF1-203ENST00000472627 ACOT6Q3I5F7 207 aaPredicted RBP9.3□□□□□ -0.92
SMURF1-203ENST00000472627 LINC01556Q5JQF7 62 aa9.3□□□□□ -0.92
SMURF1-203ENST00000472627 MGAT4CQ9UBM8 478 aa9.3□□□□□ -0.92
SMURF1-203ENST00000472627 LRP1Q07954 4544 aaKnown RBP9.3□□□□□ -0.92
SMURF1-203ENST00000472627 K7EPK0 472 aa9.29□□□□□ -0.92
SMURF1-203ENST00000472627 GPX1P07203 203 aa9.29□□□□□ -0.92
SMURF1-203ENST00000472627 SNRPCP09234 159 aaKnown RBP9.29□□□□□ -0.92
SMURF1-203ENST00000472627 TNFSF8P32971 234 aa9.29□□□□□ -0.92
SMURF1-203ENST00000472627 MORN5Q5VZ52 161 aa9.29□□□□□ -0.92
SMURF1-203ENST00000472627 SCXQ7RTU7 201 aa9.29□□□□□ -0.92
SMURF1-203ENST00000472627 IQCF2Q8IXL9 164 aa9.29□□□□□ -0.92
SMURF1-203ENST00000472627 SMIM4Q8WVI0 70 aa9.29□□□□□ -0.92
SMURF1-203ENST00000472627 SLC25A31Q9H0C2 315 aa9.29□□□□□ -0.92
SMURF1-203ENST00000472627 NPVFQ9HCQ7 196 aa9.29□□□□□ -0.92
SMURF1-203ENST00000472627 MCUBQ9NWR8 336 aa9.29□□□□□ -0.92
SMURF1-203ENST00000472627 DNAH8Q96JB1 4490 aa9.29□□□□□ -0.92
SMURF1-203ENST00000472627 KLLNB2CW77 178 aa9.28□□□□□ -0.92
SMURF1-203ENST00000472627 SLC17A3O00476 420 aa9.28□□□□□ -0.92
SMURF1-203ENST00000472627 RNASE4P34096 147 aaKnown RBP9.28□□□□□ -0.92
SMURF1-203ENST00000472627 TIRAPP58753 221 aa9.28□□□□□ -0.92
SMURF1-203ENST00000472627 POLR2GP62487 172 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMURF1-203ENST00000472627 BTN1A1Q13410 526 aa9.28□□□□□ -0.92
SMURF1-203ENST00000472627 MRPL53Q96EL3 112 aaKnown RBP9.28□□□□□ -0.92
SMURF1-203ENST00000472627 LINC00477Q96M19 166 aa9.28□□□□□ -0.92
SMURF1-203ENST00000472627 RABL2AQ9UBK7 228 aaPredicted RBP9.28□□□□□ -0.92
SMURF1-203ENST00000472627 RABL2BQ9UNT1 228 aa9.28□□□□□ -0.92
SMURF1-203ENST00000472627 IGHV1OR15-1A0A075B7D0 117 aa9.27□□□□□ -0.93
SMURF1-203ENST00000472627 A0A087WXM4 84 aa9.27□□□□□ -0.93
SMURF1-203ENST00000472627 FNDC10F2Z333 226 aa9.27□□□□□ -0.93
SMURF1-203ENST00000472627 H3BTX0 84 aa9.27□□□□□ -0.93
SMURF1-203ENST00000472627 RGS5O15539 181 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms