RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 TRIML2Q8N7C3 387 aa1.91□□□□□ -2.1
VPS13A-210ENST00000471439 LINC00304Q8N9R0 145 aa1.91□□□□□ -2.1
VPS13A-210ENST00000471439 OR1P1Q8NH06 330 aa1.91□□□□□ -2.1
VPS13A-210ENST00000471439 SPACA4Q8TDM5 124 aa1.91□□□□□ -2.1
VPS13A-210ENST00000471439 TMEM239Q8WW34 195 aa1.91□□□□□ -2.1
VPS13A-210ENST00000471439 MRPS24Q96EL2 167 aaKnown RBP1.91□□□□□ -2.1
VPS13A-210ENST00000471439 Q96MT0 163 aa1.91□□□□□ -2.1
VPS13A-210ENST00000471439 NAPGQ99747 312 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-210ENST00000471439 C20orf144Q9BQM9 153 aa1.91□□□□□ -2.1
VPS13A-210ENST00000471439 TMEM208Q9BTX3 173 aa1.91□□□□□ -2.1
VPS13A-210ENST00000471439 SLC35B3Q9H1N7 401 aa1.91□□□□□ -2.1
VPS13A-210ENST00000471439 NOP10Q9NPE3 64 aaKnown RBP1.91□□□□□ -2.1
VPS13A-210ENST00000471439 GPR84Q9NQS5 396 aa1.91□□□□□ -2.1
VPS13A-210ENST00000471439 WASHC3Q9Y3C0 194 aa1.91□□□□□ -2.1
VPS13A-210ENST00000471439 TRAV8-6A0A0B4J262 113 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 A0A1W2PPV4 95 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 A6NIN4 97 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 TMEM14DPA8MWL7 114 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 OR7C2O60412 319 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 KRT75O95678 551 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 IFI30P13284 250 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 HLA-DRB4P13762 266 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 TSPOP30536 169 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 PHBP35232 272 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 TAS2R41P59536 307 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 DEFB1P60022 68 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 MRPS15P82914 257 aaKnown RBP1.9□□□□□ -2.11
VPS13A-210ENST00000471439 TNXAQ16473 311 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 LINC01556Q5JQF7 62 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 CLVS2Q5SYC1 327 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 GDF5OSQ5U4N7 250 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 TMEM42Q69YG0 159 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 SPINT4Q6UDR6 99 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 ORMDL3Q8N138 153 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 CCNYL1Q8N7R7 359 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 DCANP1Q8TF63 244 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 IGF2BP2-AS1Q96M15 143 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 MED31Q9Y3C7 131 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 TIMM8BQ9Y5J9 83 aaPredicted RBP1.9□□□□□ -2.11
VPS13A-210ENST00000471439 V9GYY5 206 aaPredicted RBP1.9□□□□□ -2.11
VPS13A-210ENST00000471439 HLA-DRB4X5D2U9 266 aa1.9□□□□□ -2.11
VPS13A-210ENST00000471439 TRAV14DV4A0A0A6YYC5 116 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 DHRS12A0PJE2 317 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 C5orf58C9J3I9 102 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.89□□□□□ -2.11
VPS13A-210ENST00000471439 DEGS1O15121 323 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 UPK1BO75841 260 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 ZNF682O95780 498 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 IGHV3-30P01768 117 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 IGHV3-33P01772 117 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 MBP02144 154 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 APOC1P02654 83 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 IGHV3-30-3P0DP02 117 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 IGHV3-30-5P0DP03 117 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 UBE2D1P51668 147 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 CLDN12P56749 244 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 RPL39P5Q59GN2 51 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 C6orf183Q5T699 404 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 DAZ4Q86SG3 579 aaKnown RBP1.89□□□□□ -2.11
VPS13A-210ENST00000471439 PRNTQ86SH4 94 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 PDPNQ86YL7 162 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 SLC7A5P1Q8MH63 180 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 ATP6V0E2Q8NHE4 81 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 DGCR14Q96DF8 476 aaKnown RBP1.89□□□□□ -2.11
VPS13A-210ENST00000471439 PPP3R2Q96LZ3 170 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 NMNAT3Q96T66 252 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 VSIRQ9H7M9 311 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 DNAJC15Q9Y5T4 150 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 IER3IP1Q9Y5U9 82 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 ENPP4Q9Y6X5 453 aa1.89□□□□□ -2.11
VPS13A-210ENST00000471439 TRAV8-4A0A0B4J246 113 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 PRORSD1PA6NEY8 169 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 CDC42EP2O14613 210 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 AZIN1O14977 448 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 ORC5O43913 435 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 P01737 135 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 CRHBPP24387 322 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 PRSS3P35030 304 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 MTPNP58546 118 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 BTN1A1Q13410 526 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 MORN2Q502X0 79 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 SPINK9Q5DT21 86 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 C10orf55Q5SWW7 151 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 SYCE1Q8N0S2 351 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 LINC00469Q8N7U9 141 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 GPR32P1Q8NGA4 272 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 OR52N1Q8NH53 320 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 OR1S1Q8NH92 325 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 ACOT12Q8WYK0 555 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 TLCD1Q96CP7 247 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 SHANK2-AS3Q9BTD1 123 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 RAB22AQ9UL26 194 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 GMEB1Q9Y692 573 aa1.88□□□□□ -2.11
VPS13A-210ENST00000471439 TRAV8-3A0A0A6YYJ7 113 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 IGKV1-12A0A0C4DH73 117 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 EFCAB9A8MZ26 197 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 H0YJX3 145 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 K7EN84 100 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 MYL12BO14950 172 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 SCO1O75880 301 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms