RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, human

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VARS-222	ENST00000470953	SLC25A22	Q9H936	323 aa		4.22	□□□□□ -1.73
VARS-222	ENST00000470953	GPN1	Q9HCN4	374 aa	Predicted RBP	4.22	□□□□□ -1.73
VARS-222	ENST00000470953	NRN1	Q9NPD7	142 aa		4.22	□□□□□ -1.73
VARS-222	ENST00000470953	LSM5	Q9Y4Y9	91 aa	Known RBP	4.22	□□□□□ -1.73
VARS-222	ENST00000470953	KNCN	A6PVL3	124 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953		K7EP13	123 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953		K7EQG2	157 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	PITX3	O75364	302 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	TCRB	P04435	133 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	IL5	P05113	134 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	OR5G3	P0C626	314 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	SPP1	P10451	314 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	ORM2	P19652	201 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	CAV2	P51636	162 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	ZNF90	Q03938	601 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	TMEM41B	Q5BJD5	291 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	SAMD13	Q5VXD3	122 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	FAM90A2P	Q658T7	463 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	UQCC3	Q6UW78	93 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	GSG1L	Q6UXU4	331 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	FAM24B	Q8N5W8	94 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	OR10P1	Q8NGE3	313 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	ZNF431	Q8TF32	576 aa	Predicted RBP	4.21	□□□□□ -1.74
VARS-222	ENST00000470953	GLMP	Q8WWB7	406 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	SDHC	Q99643	169 aa	Predicted RBP	4.21	□□□□□ -1.74
VARS-222	ENST00000470953	NDUFAF3	Q9BU61	184 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	DOK5	Q9P104	306 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	NAGK	Q9UJ70	344 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	RCL1	Q9Y2P8	373 aa	Known RBP	4.21	□□□□□ -1.74
VARS-222	ENST00000470953	NACA	E9PAV3	2078 aa		4.21	□□□□□ -1.74
VARS-222	ENST00000470953	TEX46	H3BTG2	121 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	BUB3	O43684	328 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	LINC00869	P0C866	280 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953		P0DMU3	169 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	FAM231A	P0DMU4	169 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	FAM231C	P0DMU5	169 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	CDC34	P49427	236 aa	Predicted RBP	4.2	□□□□□ -1.74
VARS-222	ENST00000470953	PSMB3	P49720	205 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	DLK1	P80370	383 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	RAB31	Q13636	194 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	C1orf194	Q5T5A4	169 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	LCE2D	Q5TA82	110 aa	Predicted RBP	4.2	□□□□□ -1.74
VARS-222	ENST00000470953	EBLN2	Q6P2I7	272 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	MORN3	Q6PF18	240 aa	Predicted RBP	4.2	□□□□□ -1.74
VARS-222	ENST00000470953	CYP2G1P	Q6ZSU1	146 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953		Q6ZTC4	211 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	ZNF546	Q86UE3	836 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	OR4D5	Q8NGN0	318 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	OR11H2	Q8NH07	326 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	DCANP1	Q8TF63	244 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	ZNF479	Q96JC4	524 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	C16orf92	Q96LL3	132 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	RARRES2	Q99969	163 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	C1QTNF4	Q9BXJ3	329 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	C11orf68	Q9H3H3	251 aa	Known RBP	4.2	□□□□□ -1.74
VARS-222	ENST00000470953	RNF24	Q9Y225	148 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	HIGD1A	Q9Y241	93 aa		4.2	□□□□□ -1.74
VARS-222	ENST00000470953	IGKV1D-37	A0A075B6S9	117 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	ELOA3C	A0A087WX78	387 aa	Predicted RBP	4.19	□□□□□ -1.74
VARS-222	ENST00000470953	UBE2L5P	A0A1B0GUS4	154 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	TMEM218	A2RU14	115 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	C1orf196	B1AJZ1	125 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	C11orf94	C9JXX5	98 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	GOSR2	O14653	212 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	PLA2G10	O15496	165 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	SSNA1	O43805	119 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	COX7A2P2	O60397	106 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	HYPM	O75409	117 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	IGKV3-20	P01619	116 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	NBEAP1	P0C6P0	100 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	HLA-DMB	P28068	263 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	FUS	P35637	526 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
VARS-222	ENST00000470953	TAS2R30	P59541	319 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	RPS20	P60866	119 aa	Known RBP	4.19	□□□□□ -1.74
VARS-222	ENST00000470953	SELENOT	P62341	195 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	HBG1	P69891	147 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	HBG2	P69892	147 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	SLC38A11	Q08AI6	406 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	PSG3	Q16557	428 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	GUK1	Q16774	197 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	TEPP	Q6URK8	271 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	TMEM144	Q7Z5S9	345 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	SVBP	Q8N300	66 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	THAP8	Q8NA92	274 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	OR4B1	Q8NGF8	309 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	SMIM12	Q96EX1	92 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	SMIM8	Q96KF7	97 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	GPR82	Q96P67	336 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	RNF126	Q9BV68	326 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	SLC45A2	Q9UMX9	530 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953		U3KQE9	123 aa		4.19	□□□□□ -1.74
VARS-222	ENST00000470953	IGHV3OR16-12	A0A075B7B8	117 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	PGPEP1L	A6NFU8	196 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	FAM74A7	A6NL05	159 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953		K7EPK0	472 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	ISLR	O14498	428 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	ARPC5	O15511	151 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	PRAF2	O60831	178 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	CST7	O76096	145 aa		4.18	□□□□□ -1.74
VARS-222	ENST00000470953	MBP	P02686	304 aa	Predicted RBP	4.18	□□□□□ -1.74

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