RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 TAF9BQ9HBM6 251 aa1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 PRRC2BQ5JSZ5 2229 aaKnown RBP1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 ZCCHC11Q5TAX3 1644 aaKnown RBP1.25□□□□□ -2.21
PRPF40A-205ENST00000467114 ADGBQ8N7X0 1667 aa1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 TRBV6-4A0A1B0GX49 114 aa1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 CCL25O15444 150 aa1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 DNAL4O96015 105 aa1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 ZNF25P17030 456 aaPredicted RBP1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 RPS3P23396 243 aaKnown RBP eCLIP1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 KRTAP26-1Q6PEX3 210 aa1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 TEN1Q86WV5 123 aa1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 OR5AS1Q8N127 324 aa1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 FAM19A2Q8N3H0 131 aa1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 TEX29Q8N6K0 151 aa1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 DIRC1Q969H9 104 aa1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 OBSCN-AS1Q96MR7 158 aa1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 PRELID3AQ96N28 172 aa1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 MRPL57Q9BQC6 102 aaKnown RBP1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 TPRKBQ9Y3C4 175 aa1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 LAMB4A4D0S4 1761 aa1.24□□□□□ -2.21
PRPF40A-205ENST00000467114 TRAV13-1A0A0B4J241 112 aa1.23□□□□□ -2.21
PRPF40A-205ENST00000467114 ARL5CA6NH57 179 aa1.23□□□□□ -2.21
PRPF40A-205ENST00000467114 C5orf58C9J3I9 102 aa1.23□□□□□ -2.21
PRPF40A-205ENST00000467114 C5orf67F2Z3F1 127 aa1.23□□□□□ -2.21
PRPF40A-205ENST00000467114 H3BMG7 143 aa1.23□□□□□ -2.21
PRPF40A-205ENST00000467114 NUPR1O60356 82 aa1.23□□□□□ -2.21
PRPF40A-205ENST00000467114 FABP4P15090 132 aa1.23□□□□□ -2.21
PRPF40A-205ENST00000467114 GDF5OSQ5U4N7 250 aa1.23□□□□□ -2.21
PRPF40A-205ENST00000467114 TMEM229BQ8NBD8 167 aa1.23□□□□□ -2.21
PRPF40A-205ENST00000467114 LINC00526Q96FQ7 95 aa1.23□□□□□ -2.21
PRPF40A-205ENST00000467114 NIT2Q9NQR4 276 aa1.23□□□□□ -2.21
PRPF40A-205ENST00000467114 C19orf12Q9NSK7 152 aa1.23□□□□□ -2.21
PRPF40A-205ENST00000467114 MGAMO43451 1857 aa1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 TRPM1Q7Z4N2 1603 aa1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 HEATR1Q9H583 2144 aaKnown RBP1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 TRBV27A0A0K0K1C4 114 aa1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 H3BRM9 83 aa1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 COX7CP15954 63 aa1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 RPS28P62857 69 aaKnown RBP1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 VMA21Q3ZAQ7 101 aa1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 OR10AG1Q8NH19 301 aa1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 ODF3Q96PU9 254 aa1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 OR4C12Q96R67 309 aa1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 BATF3Q9NR55 127 aa1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 SPANXA1Q9NS26 97 aa1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 TMEM14CQ9P0S9 112 aa1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 NUP210Q8TEM1 1887 aaPredicted RBP1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 TNRC6BQ9UPQ9 1833 aaKnown RBP1.22□□□□□ -2.21
PRPF40A-205ENST00000467114 FRMPD1Q5SYB0 1578 aa1.21□□□□□ -2.22
PRPF40A-205ENST00000467114 KIAA1549Q9HCM3 1950 aa1.21□□□□□ -2.22
PRPF40A-205ENST00000467114 NISCHQ9Y2I1 1504 aa1.21□□□□□ -2.22
PRPF40A-205ENST00000467114 POLEQ07864 2286 aa1.21□□□□□ -2.22
PRPF40A-205ENST00000467114 PIK3C2AO00443 1686 aa1.21□□□□□ -2.22
PRPF40A-205ENST00000467114 TRBV7-6A0A0J9YX20 115 aa1.21□□□□□ -2.22
PRPF40A-205ENST00000467114 LOC107984640A0A0U1RRK4 108 aa1.21□□□□□ -2.22
PRPF40A-205ENST00000467114 C9orf170A2RU37 121 aa1.21□□□□□ -2.22
PRPF40A-205ENST00000467114 KLF7O75840 302 aaPredicted RBP1.21□□□□□ -2.22
PRPF40A-205ENST00000467114 TPT1P13693 172 aaKnown RBP1.21□□□□□ -2.22
PRPF40A-205ENST00000467114 DIAPH2-AS1Q14236 149 aa1.21□□□□□ -2.22
PRPF40A-205ENST00000467114 SPRNQ5BIV9 151 aa1.21□□□□□ -2.22
PRPF40A-205ENST00000467114 TMEM138Q9NPI0 162 aa1.21□□□□□ -2.22
PRPF40A-205ENST00000467114 CBLN4Q9NTU7 201 aa1.21□□□□□ -2.22
PRPF40A-205ENST00000467114 TNRC6AQ8NDV7 1962 aaKnown RBP1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 A0A096LPI6 279 aa1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 J3KT08 172 aa1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 FREM3P0C091 2139 aa1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 ARL14EPLP0DKL9 152 aa1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 SRP9P49458 86 aaKnown RBP1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 FOXA3P55318 350 aaPredicted RBP1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 MAXP61244 160 aa1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 MIR22HGQ0VDD5 57 aa1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 CCL4L1Q8NHW4 92 aa1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 BRK1Q8WUW1 75 aa1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 PSMF1Q92530 271 aa1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 AIF1LQ9BQI0 150 aa1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 CST11Q9H112 138 aa1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 ADGRB2O60241 1585 aa1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 RFX7Q2KHR2 1363 aa1.2□□□□□ -2.22
PRPF40A-205ENST00000467114 A2MP01023 1474 aa1.19□□□□□ -2.22
PRPF40A-205ENST00000467114 M0QZK8 103 aa1.19□□□□□ -2.22
PRPF40A-205ENST00000467114 DEGS1O15121 323 aa1.19□□□□□ -2.22
PRPF40A-205ENST00000467114 TRACP01848 142 aa1.19□□□□□ -2.22
PRPF40A-205ENST00000467114 CRYGSP22914 178 aa1.19□□□□□ -2.22
PRPF40A-205ENST00000467114 LINC00322Q6ZN03 302 aaPredicted RBP1.19□□□□□ -2.22
PRPF40A-205ENST00000467114 FOXI2Q6ZQN5 318 aa1.19□□□□□ -2.22
PRPF40A-205ENST00000467114 MORN4Q8NDC4 146 aa1.19□□□□□ -2.22
PRPF40A-205ENST00000467114 KIAA1107Q9UPP5 1409 aa1.19□□□□□ -2.22
PRPF40A-205ENST00000467114 TECTAO75443 2155 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 PLXNA4Q9HCM2 1894 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 TRAV36DV7A0A075B6V5 113 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 SCGB1A1P11684 91 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 RPL22P35268 128 aaKnown RBP1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 PSG9Q00887 426 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 OR8B8Q15620 311 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 OR8I2Q8N0Y5 310 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 LINC00269Q8N2A0 174 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 OR5AK2Q8NH90 309 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 CLEC2BQ92478 149 aa1.18□□□□□ -2.22
PRPF40A-205ENST00000467114 SPANXCQ9NY87 97 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms