RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 OR7C2O60412 319 aa9.3□□□□□ -0.92
COL5A1-206ENST00000465877 NDUFB4O95168 129 aa9.3□□□□□ -0.92
COL5A1-206ENST00000465877 RHOBP62745 196 aa9.3□□□□□ -0.92
COL5A1-206ENST00000465877 C1orf158Q8N1D5 194 aa9.3□□□□□ -0.92
COL5A1-206ENST00000465877 MRPL53Q96EL3 112 aaKnown RBP9.3□□□□□ -0.92
COL5A1-206ENST00000465877 OR51M1Q9H341 326 aa9.3□□□□□ -0.92
COL5A1-206ENST00000465877 CELA1Q9UNI1 258 aa9.3□□□□□ -0.92
COL5A1-206ENST00000465877 TIMM9Q9Y5J7 89 aa9.3□□□□□ -0.92
COL5A1-206ENST00000465877 RFNGQ9Y644 331 aa9.3□□□□□ -0.92
COL5A1-206ENST00000465877 TRAV12-2A0A075B6T6 113 aa9.29□□□□□ -0.92
COL5A1-206ENST00000465877 LCE6AA0A183 80 aa9.29□□□□□ -0.92
COL5A1-206ENST00000465877 M0R3E3 92 aa9.29□□□□□ -0.92
COL5A1-206ENST00000465877 OR10J4P0C629 311 aa9.29□□□□□ -0.92
COL5A1-206ENST00000465877 UBE2L3P68036 154 aaKnown RBP9.29□□□□□ -0.92
COL5A1-206ENST00000465877 KHDC3LQ587J8 217 aa9.29□□□□□ -0.92
COL5A1-206ENST00000465877 HSD17B11Q8NBQ5 300 aa9.29□□□□□ -0.92
COL5A1-206ENST00000465877 INO80EQ8NBZ0 244 aaPredicted RBP9.29□□□□□ -0.92
COL5A1-206ENST00000465877 OR10J6PQ8NGY7 276 aa9.29□□□□□ -0.92
COL5A1-206ENST00000465877 PHLDA1Q8WV24 401 aaPredicted RBP9.29□□□□□ -0.92
COL5A1-206ENST00000465877 FXYD5Q96DB9 178 aa9.29□□□□□ -0.92
COL5A1-206ENST00000465877 TMEM208Q9BTX3 173 aa9.29□□□□□ -0.92
COL5A1-206ENST00000465877 PAXXQ9BUH6 204 aa9.29□□□□□ -0.92
COL5A1-206ENST00000465877 AAMDCQ9H7C9 122 aa9.29□□□□□ -0.92
COL5A1-206ENST00000465877 PPP1R14DQ9NXH3 145 aa9.29□□□□□ -0.92
COL5A1-206ENST00000465877 TNFSF18Q9UNG2 199 aa9.29□□□□□ -0.92
COL5A1-206ENST00000465877 SMIM9A6NGZ8 99 aa9.28□□□□□ -0.92
COL5A1-206ENST00000465877 M6PRP20645 277 aa9.28□□□□□ -0.92
COL5A1-206ENST00000465877 CDKN1BP46527 198 aa9.28□□□□□ -0.92
COL5A1-206ENST00000465877 TAS2R45P59539 299 aa9.28□□□□□ -0.92
COL5A1-206ENST00000465877 RAB2AP61019 212 aa9.28□□□□□ -0.92
COL5A1-206ENST00000465877 CEMP1Q6PRD7 247 aaPredicted RBP9.28□□□□□ -0.92
COL5A1-206ENST00000465877 EXOC3-AS1Q8N2X6 119 aa9.28□□□□□ -0.92
COL5A1-206ENST00000465877 ZNF503Q96F45 646 aa9.28□□□□□ -0.92
COL5A1-206ENST00000465877 PHYHIPLQ96FC7 376 aa9.28□□□□□ -0.92
COL5A1-206ENST00000465877 PRELID1Q9Y255 219 aa9.28□□□□□ -0.92
COL5A1-206ENST00000465877 VPS13DQ5THJ4 4388 aa9.27□□□□□ -0.92
COL5A1-206ENST00000465877 TMEM189A5PLL7 270 aa9.27□□□□□ -0.93
COL5A1-206ENST00000465877 NPIPB6E9PJ23 425 aa9.27□□□□□ -0.93
COL5A1-206ENST00000465877 EIF3GO75821 320 aaKnown RBP eCLIP9.27□□□□□ -0.93
COL5A1-206ENST00000465877 JTBO76095 146 aa9.27□□□□□ -0.93
COL5A1-206ENST00000465877 HBE1P02100 147 aa9.27□□□□□ -0.93
COL5A1-206ENST00000465877 NBEAP1P0C6P0 100 aa9.27□□□□□ -0.93
COL5A1-206ENST00000465877 ATP6V0CP27449 155 aa9.27□□□□□ -0.93
COL5A1-206ENST00000465877 ICAM4Q14773 271 aa9.27□□□□□ -0.93
COL5A1-206ENST00000465877 RRN3P1Q2M238 152 aa9.27□□□□□ -0.93
COL5A1-206ENST00000465877 ACOT6Q3I5F7 207 aaPredicted RBP9.27□□□□□ -0.93
COL5A1-206ENST00000465877 Q6ZTC4 211 aa9.27□□□□□ -0.93
COL5A1-206ENST00000465877 OR2G3Q8NGZ4 309 aa9.27□□□□□ -0.93
COL5A1-206ENST00000465877 RNF141Q8WVD5 230 aa9.27□□□□□ -0.93
COL5A1-206ENST00000465877 PSMG3Q9BT73 122 aaPredicted RBP9.27□□□□□ -0.93
COL5A1-206ENST00000465877 KLK5Q9Y337 293 aaPredicted RBP9.27□□□□□ -0.93
COL5A1-206ENST00000465877 LOC102723971A0A1B0GUV8 181 aa9.26□□□□□ -0.93
COL5A1-206ENST00000465877 ARPC5O15511 151 aa9.26□□□□□ -0.93
COL5A1-206ENST00000465877 EMP1P54849 157 aa9.26□□□□□ -0.93
COL5A1-206ENST00000465877 FAM122CQ6P4D5 195 aa9.26□□□□□ -0.93
COL5A1-206ENST00000465877 RPP25LQ8N5L8 163 aaKnown RBP9.26□□□□□ -0.93
COL5A1-206ENST00000465877 ODF3Q96PU9 254 aa9.26□□□□□ -0.93
COL5A1-206ENST00000465877 SH3BGRL3Q9H299 93 aa9.26□□□□□ -0.93
COL5A1-206ENST00000465877 A0A1W2PPV4 95 aa9.25□□□□□ -0.93
COL5A1-206ENST00000465877 SMLR1H3BR10 107 aa9.25□□□□□ -0.93
COL5A1-206ENST00000465877 CDC34P49427 236 aaPredicted RBP9.25□□□□□ -0.93
COL5A1-206ENST00000465877 GFI1BQ5VTD9 330 aa9.25□□□□□ -0.93
COL5A1-206ENST00000465877 RPL7L1Q6DKI1 246 aaKnown RBP9.25□□□□□ -0.93
COL5A1-206ENST00000465877 ZNF767PQ75MW2 155 aa9.25□□□□□ -0.93
COL5A1-206ENST00000465877 TMEM256Q8N2U0 113 aa9.25□□□□□ -0.93
COL5A1-206ENST00000465877 IGKV2-40A0A087WW87 121 aaPredicted RBP9.24□□□□□ -0.93
COL5A1-206ENST00000465877 TEX48A0A1B0GUV7 120 aa9.24□□□□□ -0.93
COL5A1-206ENST00000465877 C11orf94C9JXX5 98 aa9.24□□□□□ -0.93
COL5A1-206ENST00000465877 IGKV2D-40P01614 121 aaPredicted RBP9.24□□□□□ -0.93
COL5A1-206ENST00000465877 CT45A10P0DMU9 189 aa9.24□□□□□ -0.93
COL5A1-206ENST00000465877 TSPOP30536 169 aa9.24□□□□□ -0.93
COL5A1-206ENST00000465877 LEPP41159 167 aa9.24□□□□□ -0.93
COL5A1-206ENST00000465877 KIR3DS1Q14943 382 aa9.24□□□□□ -0.93
COL5A1-206ENST00000465877 PQLC2Q6ZP29 291 aa9.24□□□□□ -0.93
COL5A1-206ENST00000465877 OR10G4Q8NGN3 311 aa9.24□□□□□ -0.93
COL5A1-206ENST00000465877 OR10G9Q8NGN4 311 aa9.24□□□□□ -0.93
COL5A1-206ENST00000465877 OR10G7Q8NGN6 311 aa9.24□□□□□ -0.93
COL5A1-206ENST00000465877 C20orf144Q9BQM9 153 aa9.24□□□□□ -0.93
COL5A1-206ENST00000465877 Q9H3A6 140 aa9.24□□□□□ -0.93
COL5A1-206ENST00000465877 YTHDF2Q9Y5A9 579 aaKnown RBP9.24□□□□□ -0.93
COL5A1-206ENST00000465877 DNAH6Q9C0G6 4158 aa9.24□□□□□ -0.93
COL5A1-206ENST00000465877 KMT2AQ03164 3969 aa9.24□□□□□ -0.93
COL5A1-206ENST00000465877 BORCS7-ASMTA0A0B4J1R7 106 aa9.23□□□□□ -0.93
COL5A1-206ENST00000465877 TRAV10A0A0B4J240 114 aa9.23□□□□□ -0.93
COL5A1-206ENST00000465877 ZNF705GA8MUZ8 300 aaPredicted RBP9.23□□□□□ -0.93
COL5A1-206ENST00000465877 J3KRW8 73 aa9.23□□□□□ -0.93
COL5A1-206ENST00000465877 HMGB3O15347 200 aaKnown RBP9.23□□□□□ -0.93
COL5A1-206ENST00000465877 ARL14EPLP0DKL9 152 aa9.23□□□□□ -0.93
COL5A1-206ENST00000465877 RANP62826 216 aaKnown RBP9.23□□□□□ -0.93
COL5A1-206ENST00000465877 SERF2P84101 59 aa9.23□□□□□ -0.93
COL5A1-206ENST00000465877 ERCC8Q13216 396 aa9.23□□□□□ -0.93
COL5A1-206ENST00000465877 C12orf74Q32Q52 190 aa9.23□□□□□ -0.93
COL5A1-206ENST00000465877 FAM222AQ5U5X8 452 aa9.23□□□□□ -0.93
COL5A1-206ENST00000465877 C9orf47Q6ZRZ4 202 aa9.23□□□□□ -0.93
COL5A1-206ENST00000465877 LYPD1Q8N2G4 141 aa9.23□□□□□ -0.93
COL5A1-206ENST00000465877 C2CD4CQ8TF44 421 aa9.23□□□□□ -0.93
COL5A1-206ENST00000465877 LINC00476Q8WZB0 136 aa9.23□□□□□ -0.93
COL5A1-206ENST00000465877 DKK2Q9UBU2 259 aa9.23□□□□□ -0.93
COL5A1-206ENST00000465877 MBP02144 154 aa9.22□□□□□ -0.93
COL5A1-206ENST00000465877 PRM2P04554 102 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms