RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 CD81P60033 236 aa11.16□□□□□ -0.62
ABCF3-204ENST00000463685 SNRPD3P62318 126 aaKnown RBP11.16□□□□□ -0.62
ABCF3-204ENST00000463685 SRSF3P84103 164 aaKnown RBP11.16□□□□□ -0.62
ABCF3-204ENST00000463685 PMS2P11Q13670 270 aa11.16□□□□□ -0.62
ABCF3-204ENST00000463685 ODF3L2Q3SX64 289 aa11.16□□□□□ -0.62
ABCF3-204ENST00000463685 APRG1Q8IVJ8 170 aa11.16□□□□□ -0.62
ABCF3-204ENST00000463685 LYPD1Q8N2G4 141 aa11.16□□□□□ -0.62
ABCF3-204ENST00000463685 ZNF738Q8NE65 137 aa11.16□□□□□ -0.62
ABCF3-204ENST00000463685 RXFP4Q8TDU9 374 aa11.16□□□□□ -0.62
ABCF3-204ENST00000463685 WFDC10AQ9H1F0 79 aa11.16□□□□□ -0.62
ABCF3-204ENST00000463685 KNCNA6PVL3 124 aa11.15□□□□□ -0.62
ABCF3-204ENST00000463685 F6UB75 175 aa11.15□□□□□ -0.62
ABCF3-204ENST00000463685 ZNF705DP0CH99 300 aaPredicted RBP11.15□□□□□ -0.62
ABCF3-204ENST00000463685 ZNF705BP0CI00 300 aaPredicted RBP11.15□□□□□ -0.62
ABCF3-204ENST00000463685 ZNF506Q5JVG8 444 aa11.15□□□□□ -0.62
ABCF3-204ENST00000463685 SAMD13Q5VXD3 122 aa11.15□□□□□ -0.62
ABCF3-204ENST00000463685 CCDC28AQ8IWP9 274 aa11.15□□□□□ -0.62
ABCF3-204ENST00000463685 RPUSD4Q96CM3 377 aaKnown RBP11.15□□□□□ -0.62
ABCF3-204ENST00000463685 FAM210AQ96ND0 272 aa11.15□□□□□ -0.62
ABCF3-204ENST00000463685 EIF5A2Q9GZV4 153 aaKnown RBP11.15□□□□□ -0.62
ABCF3-204ENST00000463685 VAX2Q9UIW0 290 aa11.15□□□□□ -0.62
ABCF3-204ENST00000463685 MGAM2Q2M2H8 2515 aa11.14□□□□□ -0.63
ABCF3-204ENST00000463685 IGKV2-40A0A087WW87 121 aaPredicted RBP11.14□□□□□ -0.63
ABCF3-204ENST00000463685 IGKV2D-40P01614 121 aaPredicted RBP11.14□□□□□ -0.63
ABCF3-204ENST00000463685 GDF5OSQ5U4N7 250 aa11.14□□□□□ -0.63
ABCF3-204ENST00000463685 CMTM2Q8TAZ6 248 aa11.14□□□□□ -0.63
ABCF3-204ENST00000463685 EPDR1Q9UM22 224 aa11.14□□□□□ -0.63
ABCF3-204ENST00000463685 ARL2-SNX15V9GYD0 113 aa11.14□□□□□ -0.63
ABCF3-204ENST00000463685 SCO2A0A1W2PP80 73 aa11.13□□□□□ -0.63
ABCF3-204ENST00000463685 OR11H12B2RN74 326 aa11.13□□□□□ -0.63
ABCF3-204ENST00000463685 DIRC3C9JPN6 131 aa11.13□□□□□ -0.63
ABCF3-204ENST00000463685 C9JQL5 133 aa11.13□□□□□ -0.63
ABCF3-204ENST00000463685 MEF2BQ02080 365 aaPredicted RBP11.13□□□□□ -0.63
ABCF3-204ENST00000463685 EGFEM1PQ0D2K5 195 aa11.13□□□□□ -0.63
ABCF3-204ENST00000463685 GOLT1AQ6ZVE7 132 aa11.13□□□□□ -0.63
ABCF3-204ENST00000463685 COMMD7Q86VX2 200 aa11.13□□□□□ -0.63
ABCF3-204ENST00000463685 C5orf17Q8NAS9 161 aa11.13□□□□□ -0.63
ABCF3-204ENST00000463685 MRPL53Q96EL3 112 aaKnown RBP11.13□□□□□ -0.63
ABCF3-204ENST00000463685 C19orf73Q9NVV2 129 aa11.13□□□□□ -0.63
ABCF3-204ENST00000463685 PRELID1Q9Y255 219 aa11.13□□□□□ -0.63
ABCF3-204ENST00000463685 LINC00862A6NCI5 91 aa11.12□□□□□ -0.63
ABCF3-204ENST00000463685 PEX7O00628 323 aa11.12□□□□□ -0.63
ABCF3-204ENST00000463685 CSN1S1P47710 185 aa11.12□□□□□ -0.63
ABCF3-204ENST00000463685 ERCC8Q13216 396 aa11.12□□□□□ -0.63
ABCF3-204ENST00000463685 DEFB125Q8N687 156 aa11.12□□□□□ -0.63
ABCF3-204ENST00000463685 SGK494Q96LW2 274 aa11.12□□□□□ -0.63
ABCF3-204ENST00000463685 LINC00479Q96M42 142 aa11.12□□□□□ -0.63
ABCF3-204ENST00000463685 ASCL2Q99929 193 aa11.12□□□□□ -0.63
ABCF3-204ENST00000463685 VGLL1Q99990 258 aa11.12□□□□□ -0.63
ABCF3-204ENST00000463685 NKX6-2Q9C056 277 aaPredicted RBP11.12□□□□□ -0.63
ABCF3-204ENST00000463685 TRAV34A0A0B4J273 112 aa11.11□□□□□ -0.63
ABCF3-204ENST00000463685 PRB2P02812 416 aaPredicted RBP11.11□□□□□ -0.63
ABCF3-204ENST00000463685 TCRAP04437 139 aa11.11□□□□□ -0.63
ABCF3-204ENST00000463685 ACTL10Q5JWF8 245 aa11.11□□□□□ -0.63
ABCF3-204ENST00000463685 GTSCR1Q86UQ5 136 aa11.11□□□□□ -0.63
ABCF3-204ENST00000463685 CITED4Q96RK1 184 aa11.11□□□□□ -0.63
ABCF3-204ENST00000463685 CLEC5AQ9NY25 188 aa11.11□□□□□ -0.63
ABCF3-204ENST00000463685 AGRNO00468 2067 aa11.11□□□□□ -0.63
ABCF3-204ENST00000463685 NOTCH1P46531 2555 aa11.11□□□□□ -0.63
ABCF3-204ENST00000463685 TRAV8-1A0A0A6YYK1 113 aa11.1□□□□□ -0.63
ABCF3-204ENST00000463685 IGKV3-20P01619 116 aa11.1□□□□□ -0.63
ABCF3-204ENST00000463685 TAGLN2P37802 199 aaKnown RBP11.1□□□□□ -0.63
ABCF3-204ENST00000463685 CEBPGP53567 150 aa11.1□□□□□ -0.63
ABCF3-204ENST00000463685 HIST1H1AQ02539 215 aaPredicted RBP11.1□□□□□ -0.63
ABCF3-204ENST00000463685 Q8N1Y9 231 aa11.1□□□□□ -0.63
ABCF3-204ENST00000463685 OR8A1Q8NGG7 326 aa11.1□□□□□ -0.63
ABCF3-204ENST00000463685 ATG101Q9BSB4 218 aa11.1□□□□□ -0.63
ABCF3-204ENST00000463685 TREM1Q9NP99 234 aa11.1□□□□□ -0.63
ABCF3-204ENST00000463685 A0A0J9YX75 114 aa11.09□□□□□ -0.63
ABCF3-204ENST00000463685 RAB19A4D1S5 217 aa11.09□□□□□ -0.63
ABCF3-204ENST00000463685 SRP19P09132 144 aaKnown RBP11.09□□□□□ -0.63
ABCF3-204ENST00000463685 PEA15Q15121 130 aa11.09□□□□□ -0.63
ABCF3-204ENST00000463685 EBLN2Q6P2I7 272 aa11.09□□□□□ -0.63
ABCF3-204ENST00000463685 FOXI2Q6ZQN5 318 aa11.09□□□□□ -0.63
ABCF3-204ENST00000463685 CYB561D1Q8N8Q1 229 aa11.09□□□□□ -0.63
ABCF3-204ENST00000463685 DERL1Q9BUN8 251 aa11.09□□□□□ -0.63
ABCF3-204ENST00000463685 SAV1Q9H4B6 383 aaPredicted RBP11.09□□□□□ -0.63
ABCF3-204ENST00000463685 MED9Q9NWA0 146 aa11.09□□□□□ -0.63
ABCF3-204ENST00000463685 NBEAL1Q6ZS30 2694 aa11.08□□□□□ -0.64
ABCF3-204ENST00000463685 F6UZH7 168 aa11.08□□□□□ -0.64
ABCF3-204ENST00000463685 PDE6DO43924 150 aa11.08□□□□□ -0.64
ABCF3-204ENST00000463685 CNN1P51911 297 aaKnown RBP11.08□□□□□ -0.64
ABCF3-204ENST00000463685 CMC4P56277 68 aaPredicted RBP11.08□□□□□ -0.64
ABCF3-204ENST00000463685 OR10J6PQ8NGY7 276 aa11.08□□□□□ -0.64
ABCF3-204ENST00000463685 Q8TAT8 98 aa11.08□□□□□ -0.64
ABCF3-204ENST00000463685 C2CD4CQ8TF44 421 aa11.08□□□□□ -0.64
ABCF3-204ENST00000463685 HIST1H2BAQ96A08 127 aa11.08□□□□□ -0.64
ABCF3-204ENST00000463685 C11orf52Q96A22 123 aa11.08□□□□□ -0.64
ABCF3-204ENST00000463685 TXNDC17Q9BRA2 123 aa11.08□□□□□ -0.64
ABCF3-204ENST00000463685 AGPAT4-IT1Q9H0P7 198 aa11.08□□□□□ -0.64
ABCF3-204ENST00000463685 RBMY1BA6NDE4 496 aaKnown RBP11.07□□□□□ -0.64
ABCF3-204ENST00000463685 RBMY1EA6NEQ0 496 aaKnown RBP11.07□□□□□ -0.64
ABCF3-204ENST00000463685 NPIPB6E9PJ23 425 aa11.07□□□□□ -0.64
ABCF3-204ENST00000463685 H3BMM0 161 aa11.07□□□□□ -0.64
ABCF3-204ENST00000463685 IGLV2-11P01706 119 aa11.07□□□□□ -0.64
ABCF3-204ENST00000463685 RBMY1DP0C7P1 496 aaKnown RBP11.07□□□□□ -0.64
ABCF3-204ENST00000463685 HLA-DRB4P13762 266 aa11.07□□□□□ -0.64
ABCF3-204ENST00000463685 RPL35AP18077 110 aaKnown RBP11.07□□□□□ -0.64
ABCF3-204ENST00000463685 AKR1C3P42330 323 aa11.07□□□□□ -0.64
ABCF3-204ENST00000463685 KPRPQ5T749 579 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms