RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 AMBPP02760 352 aa11.42□□□□□ -0.58
ERCC3-206ENST00000462306 OR10J4P0C629 311 aa11.42□□□□□ -0.58
ERCC3-206ENST00000462306 M6PRP20645 277 aa11.42□□□□□ -0.58
ERCC3-206ENST00000462306 NANOS2P60321 138 aaKnown RBP11.42□□□□□ -0.58
ERCC3-206ENST00000462306 RAB2AP61019 212 aa11.42□□□□□ -0.58
ERCC3-206ENST00000462306 ACOT6Q3I5F7 207 aaPredicted RBP11.42□□□□□ -0.58
ERCC3-206ENST00000462306 OR2G3Q8NGZ4 309 aa11.42□□□□□ -0.58
ERCC3-206ENST00000462306 C11orf45Q8TAV5 145 aa11.42□□□□□ -0.58
ERCC3-206ENST00000462306 RNF141Q8WVD5 230 aa11.42□□□□□ -0.58
ERCC3-206ENST00000462306 PSMG3Q9BT73 122 aaPredicted RBP11.42□□□□□ -0.58
ERCC3-206ENST00000462306 GOLT1BQ9Y3E0 138 aa11.42□□□□□ -0.58
ERCC3-206ENST00000462306 DYNC2H1Q8NCM8 4307 aaKnown RBP11.42□□□□□ -0.58
ERCC3-206ENST00000462306 SMIM9A6NGZ8 99 aa11.41□□□□□ -0.58
ERCC3-206ENST00000462306 OR7C2O60412 319 aa11.41□□□□□ -0.58
ERCC3-206ENST00000462306 EIF3GO75821 320 aaKnown RBP eCLIP11.41□□□□□ -0.58
ERCC3-206ENST00000462306 ATP6V0CP27449 155 aa11.41□□□□□ -0.58
ERCC3-206ENST00000462306 RPL7L1Q6DKI1 246 aaKnown RBP11.41□□□□□ -0.58
ERCC3-206ENST00000462306 BAP18Q8IXM2 172 aa11.41□□□□□ -0.58
ERCC3-206ENST00000462306 EXOC3-AS1Q8N2X6 119 aa11.41□□□□□ -0.58
ERCC3-206ENST00000462306 OR10J6PQ8NGY7 276 aa11.41□□□□□ -0.58
ERCC3-206ENST00000462306 PRELID1Q9Y255 219 aa11.41□□□□□ -0.58
ERCC3-206ENST00000462306 NPIPB6E9PJ23 425 aa11.4□□□□□ -0.58
ERCC3-206ENST00000462306 TAS2R45P59539 299 aa11.4□□□□□ -0.58
ERCC3-206ENST00000462306 KHDC3LQ587J8 217 aa11.4□□□□□ -0.58
ERCC3-206ENST00000462306 OR10G4Q8NGN3 311 aa11.4□□□□□ -0.58
ERCC3-206ENST00000462306 OR10G9Q8NGN4 311 aa11.4□□□□□ -0.58
ERCC3-206ENST00000462306 OR10G7Q8NGN6 311 aa11.4□□□□□ -0.58
ERCC3-206ENST00000462306 PHYHIPLQ96FC7 376 aa11.4□□□□□ -0.58
ERCC3-206ENST00000462306 TRAV12-2A0A075B6T6 113 aa11.39□□□□□ -0.59
ERCC3-206ENST00000462306 ARPC5O15511 151 aa11.39□□□□□ -0.59
ERCC3-206ENST00000462306 INSP01308 110 aa11.39□□□□□ -0.59
ERCC3-206ENST00000462306 ICAM4Q14773 271 aa11.39□□□□□ -0.59
ERCC3-206ENST00000462306 FAM122CQ6P4D5 195 aa11.39□□□□□ -0.59
ERCC3-206ENST00000462306 CEMP1Q6PRD7 247 aaPredicted RBP11.39□□□□□ -0.59
ERCC3-206ENST00000462306 RPP25LQ8N5L8 163 aaKnown RBP11.39□□□□□ -0.59
ERCC3-206ENST00000462306 SH3BGRL3Q9H299 93 aa11.39□□□□□ -0.59
ERCC3-206ENST00000462306 AAMDCQ9H7C9 122 aa11.39□□□□□ -0.59
ERCC3-206ENST00000462306 PPP1R14DQ9NXH3 145 aa11.39□□□□□ -0.59
ERCC3-206ENST00000462306 A0A1W2PPV4 95 aa11.38□□□□□ -0.59
ERCC3-206ENST00000462306 NUPR2A6NF83 97 aa11.38□□□□□ -0.59
ERCC3-206ENST00000462306 CT45A10P0DMU9 189 aa11.38□□□□□ -0.59
ERCC3-206ENST00000462306 CDKN1BP46527 198 aa11.38□□□□□ -0.59
ERCC3-206ENST00000462306 UBE2L3P68036 154 aaKnown RBP11.38□□□□□ -0.59
ERCC3-206ENST00000462306 SERF2P84101 59 aa11.38□□□□□ -0.59
ERCC3-206ENST00000462306 KIR3DS1Q14943 382 aa11.38□□□□□ -0.59
ERCC3-206ENST00000462306 PHLDA1Q8WV24 401 aaPredicted RBP11.38□□□□□ -0.59
ERCC3-206ENST00000462306 CELA1Q9UNI1 258 aa11.38□□□□□ -0.59
ERCC3-206ENST00000462306 BORCS7-ASMTA0A0B4J1R7 106 aa11.37□□□□□ -0.59
ERCC3-206ENST00000462306 HBE1P02100 147 aa11.37□□□□□ -0.59
ERCC3-206ENST00000462306 PQLC2Q6ZP29 291 aa11.37□□□□□ -0.59
ERCC3-206ENST00000462306 LYPD1Q8N2G4 141 aa11.37□□□□□ -0.59
ERCC3-206ENST00000462306 OR11H4Q8NGC9 324 aa11.37□□□□□ -0.59
ERCC3-206ENST00000462306 GNPNAT1Q96EK6 184 aaPredicted RBP11.37□□□□□ -0.59
ERCC3-206ENST00000462306 ODF3Q96PU9 254 aa11.37□□□□□ -0.59
ERCC3-206ENST00000462306 TMEM208Q9BTX3 173 aa11.37□□□□□ -0.59
ERCC3-206ENST00000462306 CYTL1Q9NRR1 136 aa11.37□□□□□ -0.59
ERCC3-206ENST00000462306 LOC102723971A0A1B0GUV8 181 aa11.36□□□□□ -0.59
ERCC3-206ENST00000462306 TMEM189A5PLL7 270 aa11.36□□□□□ -0.59
ERCC3-206ENST00000462306 TAAR5O14804 337 aa11.36□□□□□ -0.59
ERCC3-206ENST00000462306 HMGB3O15347 200 aaKnown RBP11.36□□□□□ -0.59
ERCC3-206ENST00000462306 PRM2P04554 102 aa11.36□□□□□ -0.59
ERCC3-206ENST00000462306 TSPOP30536 169 aa11.36□□□□□ -0.59
ERCC3-206ENST00000462306 CDC34P49427 236 aaPredicted RBP11.36□□□□□ -0.59
ERCC3-206ENST00000462306 RANP62826 216 aaKnown RBP11.36□□□□□ -0.59
ERCC3-206ENST00000462306 ERCC8Q13216 396 aa11.36□□□□□ -0.59
ERCC3-206ENST00000462306 RRN3P1Q2M238 152 aa11.36□□□□□ -0.59
ERCC3-206ENST00000462306 AGPAT4-IT1Q9H0P7 198 aa11.36□□□□□ -0.59
ERCC3-206ENST00000462306 Q9H3A6 140 aa11.36□□□□□ -0.59
ERCC3-206ENST00000462306 IGKV2-40A0A087WW87 121 aaPredicted RBP11.35□□□□□ -0.59
ERCC3-206ENST00000462306 LCE6AA0A183 80 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 HMSDA8MTL9 139 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 ZNF705GA8MUZ8 300 aaPredicted RBP11.35□□□□□ -0.59
ERCC3-206ENST00000462306 JTBO76095 146 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 IGKV2D-40P01614 121 aaPredicted RBP11.35□□□□□ -0.59
ERCC3-206ENST00000462306 MBP02144 154 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 STAG3L2P0CL84 134 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 STAG3L3P0CL85 134 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 EMP1P54849 157 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 ZNF345Q14585 488 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 C12orf74Q32Q52 190 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 Q6ZNX1 250 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 C9orf47Q6ZRZ4 202 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 TMEM256Q8N2U0 113 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 KCNRGQ8N5I3 272 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 RAB24Q969Q5 203 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 FAM19A4Q96LR4 140 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 LINC00477Q96M19 166 aa11.35□□□□□ -0.59
ERCC3-206ENST00000462306 RYR3Q15413 4870 aa11.34□□□□□ -0.59
ERCC3-206ENST00000462306 LEPP41159 167 aa11.34□□□□□ -0.59
ERCC3-206ENST00000462306 GFI1BQ5VTD9 330 aa11.34□□□□□ -0.59
ERCC3-206ENST00000462306 Q6ZTC4 211 aa11.34□□□□□ -0.59
ERCC3-206ENST00000462306 VGLL1Q99990 258 aa11.34□□□□□ -0.59
ERCC3-206ENST00000462306 KLK5Q9Y337 293 aaPredicted RBP11.34□□□□□ -0.59
ERCC3-206ENST00000462306 SPART-AS1P0CW21 52 aa11.33□□□□□ -0.6
ERCC3-206ENST00000462306 ARL14EPLP0DKL9 152 aa11.33□□□□□ -0.6
ERCC3-206ENST00000462306 AZU1P20160 251 aa11.33□□□□□ -0.6
ERCC3-206ENST00000462306 ZNF767PQ75MW2 155 aa11.33□□□□□ -0.6
ERCC3-206ENST00000462306 SSX7Q7RTT5 188 aa11.33□□□□□ -0.6
ERCC3-206ENST00000462306 ST6GAL2Q96JF0 529 aa11.33□□□□□ -0.6
ERCC3-206ENST00000462306 LINC01587Q99440 93 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 199.7 ms