RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 SCO2A0A1W2PP80 73 aa11.47□□□□□ -0.57
TMEM39A-203ENST00000461654 ZNF727A8MUV8 499 aa11.47□□□□□ -0.57
TMEM39A-203ENST00000461654 EDN2P20800 178 aa11.47□□□□□ -0.57
TMEM39A-203ENST00000461654 ID1P41134 155 aa11.47□□□□□ -0.57
TMEM39A-203ENST00000461654 AKR1C3P42330 323 aa11.47□□□□□ -0.57
TMEM39A-203ENST00000461654 CNN1P51911 297 aaKnown RBP11.47□□□□□ -0.57
TMEM39A-203ENST00000461654 SMIM7Q9BQ49 75 aa11.47□□□□□ -0.57
TMEM39A-203ENST00000461654 NIPSNAP3BQ9BS92 247 aa11.47□□□□□ -0.57
TMEM39A-203ENST00000461654 RPH3ALQ9UNE2 315 aa11.47□□□□□ -0.57
TMEM39A-203ENST00000461654 IGKV3-7A0A075B6H7 116 aa11.46□□□□□ -0.57
TMEM39A-203ENST00000461654 DNASE2O00115 360 aaPredicted RBP11.46□□□□□ -0.57
TMEM39A-203ENST00000461654 PEX7O00628 323 aa11.46□□□□□ -0.57
TMEM39A-203ENST00000461654 APOC3P02656 99 aa11.46□□□□□ -0.57
TMEM39A-203ENST00000461654 S100A9P06702 114 aaKnown RBP11.46□□□□□ -0.57
TMEM39A-203ENST00000461654 CSN3P07498 182 aa11.46□□□□□ -0.57
TMEM39A-203ENST00000461654 IGLL1P15814 213 aa11.46□□□□□ -0.57
TMEM39A-203ENST00000461654 RBPMS2Q6ZRY4 209 aaKnown RBP11.46□□□□□ -0.57
TMEM39A-203ENST00000461654 ARL6IP6Q8N6S5 226 aa11.46□□□□□ -0.57
TMEM39A-203ENST00000461654 LINC00482Q8N8I6 264 aa11.46□□□□□ -0.57
TMEM39A-203ENST00000461654 ATG101Q9BSB4 218 aa11.46□□□□□ -0.57
TMEM39A-203ENST00000461654 PARLQ9H300 379 aa11.46□□□□□ -0.57
TMEM39A-203ENST00000461654 MLXQ9UH92 298 aa11.46□□□□□ -0.57
TMEM39A-203ENST00000461654 SERTM2A0A1B0GWG4 89 aa11.45□□□□□ -0.58
TMEM39A-203ENST00000461654 ISLRO14498 428 aa11.45□□□□□ -0.58
TMEM39A-203ENST00000461654 TCRAP04437 139 aa11.45□□□□□ -0.58
TMEM39A-203ENST00000461654 UBE2G1P62253 170 aa11.45□□□□□ -0.58
TMEM39A-203ENST00000461654 FAM90A2PQ658T7 463 aa11.45□□□□□ -0.58
TMEM39A-203ENST00000461654 SIGLEC8Q9NYZ4 499 aa11.45□□□□□ -0.58
TMEM39A-203ENST00000461654 CARHSP1Q9Y2V2 147 aaKnown RBP11.45□□□□□ -0.58
TMEM39A-203ENST00000461654 GNG5P63218 68 aa11.44□□□□□ -0.58
TMEM39A-203ENST00000461654 C10orf91Q5T1B1 145 aa11.44□□□□□ -0.58
TMEM39A-203ENST00000461654 SVBPQ8N300 66 aa11.44□□□□□ -0.58
TMEM39A-203ENST00000461654 GBGT1Q8N5D6 347 aa11.44□□□□□ -0.58
TMEM39A-203ENST00000461654 MRPL53Q96EL3 112 aaKnown RBP11.44□□□□□ -0.58
TMEM39A-203ENST00000461654 MS4A6AQ9H2W1 248 aa11.44□□□□□ -0.58
TMEM39A-203ENST00000461654 AURKAIP1Q9NWT8 199 aaPredicted RBP11.44□□□□□ -0.58
TMEM39A-203ENST00000461654 SAP30O75446 220 aa11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 PRB2P02812 416 aaPredicted RBP11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 ADCYAP1P18509 176 aa11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 RPL35P42766 123 aaKnown RBP11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 TAS2R60P59551 318 aa11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 PSG3Q16557 428 aa11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 TMEM241Q24JQ0 296 aa11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 IGFL4Q6B9Z1 124 aa11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 LCN12Q6JVE5 192 aa11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 ADAMTSL5Q6ZMM2 481 aa11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 GOLT1AQ6ZVE7 132 aa11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 WFDC3Q8IUB2 231 aa11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 GPR61Q9BZJ8 451 aa11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 NAT8Q9UHE5 227 aa11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 SELENOKQ9Y6D0 94 aa11.43□□□□□ -0.58
TMEM39A-203ENST00000461654 TRAV25A0A0B4J276 109 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 FBLL1A6NHQ2 334 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 DIRC3C9JPN6 131 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 M0R3E3 92 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 SNAPINO95295 136 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 TFPI2P48307 235 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 GNG4P50150 75 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 SNRPD3P62318 126 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 EGFEM1PQ0D2K5 195 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 DEFB114Q30KQ6 69 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 RNF182Q8N6D2 247 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 ZNF738Q8NE65 137 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 C2CD4CQ8TF44 421 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 TVP23CQ96ET8 276 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 FMC1Q96HJ9 113 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 DERL1Q9BUN8 251 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 MCRIP2Q9BUT9 160 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 NOTCH3Q9UM47 2321 aa11.42□□□□□ -0.58
TMEM39A-203ENST00000461654 PRKDCP78527 4128 aaKnown RBP11.41□□□□□ -0.58
TMEM39A-203ENST00000461654 TRAV2A0A0B4J234 112 aa11.41□□□□□ -0.58
TMEM39A-203ENST00000461654 TRAV8-2A0A0B4J237 113 aa11.41□□□□□ -0.58
TMEM39A-203ENST00000461654 M0R036 132 aa11.41□□□□□ -0.58
TMEM39A-203ENST00000461654 SOCS3O14543 225 aa11.41□□□□□ -0.58
TMEM39A-203ENST00000461654 TSPAN4O14817 238 aa11.41□□□□□ -0.58
TMEM39A-203ENST00000461654 PNRC1Q12796 327 aaPredicted RBP11.41□□□□□ -0.58
TMEM39A-203ENST00000461654 TMEM183BQ1AE95 376 aa11.41□□□□□ -0.58
TMEM39A-203ENST00000461654 MRAPQ8TCY5 172 aa11.41□□□□□ -0.58
TMEM39A-203ENST00000461654 TGP01266 2768 aa11.41□□□□□ -0.58
TMEM39A-203ENST00000461654 OR4C46A6NHA9 309 aa11.4□□□□□ -0.58
TMEM39A-203ENST00000461654 C9JCJ5 164 aa11.4□□□□□ -0.58
TMEM39A-203ENST00000461654 K7EQG2 157 aa11.4□□□□□ -0.58
TMEM39A-203ENST00000461654 HLA-DMBP28068 263 aa11.4□□□□□ -0.58
TMEM39A-203ENST00000461654 CENPWQ5EE01 88 aa11.4□□□□□ -0.58
TMEM39A-203ENST00000461654 TMEM61Q8N0U2 210 aa11.4□□□□□ -0.58
TMEM39A-203ENST00000461654 TMEM75Q8N9X5 138 aa11.4□□□□□ -0.58
TMEM39A-203ENST00000461654 OR2K2Q8NGT1 345 aa11.4□□□□□ -0.58
TMEM39A-203ENST00000461654 DCANP1Q8TF63 244 aa11.4□□□□□ -0.58
TMEM39A-203ENST00000461654 SPAG8Q99932 426 aaPredicted RBP11.4□□□□□ -0.58
TMEM39A-203ENST00000461654 KLF12Q9Y4X4 402 aa11.4□□□□□ -0.58
TMEM39A-203ENST00000461654 TRAV34A0A0B4J273 112 aa11.39□□□□□ -0.59
TMEM39A-203ENST00000461654 ZNF705FA8MVS1 300 aaPredicted RBP11.39□□□□□ -0.59
TMEM39A-203ENST00000461654 FLI1Q01543 452 aaPredicted RBP11.39□□□□□ -0.59
TMEM39A-203ENST00000461654 GUCA2BQ16661 112 aa11.39□□□□□ -0.59
TMEM39A-203ENST00000461654 CD300EQ496F6 205 aaPredicted RBP11.39□□□□□ -0.59
TMEM39A-203ENST00000461654 OR10J6PQ8NGY7 276 aa11.39□□□□□ -0.59
TMEM39A-203ENST00000461654 LINC00479Q96M42 142 aa11.39□□□□□ -0.59
TMEM39A-203ENST00000461654 SDF2L1Q9HCN8 221 aa11.39□□□□□ -0.59
TMEM39A-203ENST00000461654 LY96Q9Y6Y9 160 aa11.39□□□□□ -0.59
TMEM39A-203ENST00000461654 TRBV6-1A0A0K0K1D8 114 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms