RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 HLA-DRB4P13762 266 aa9.22□□□□□ -0.93
HDAC4-207ENST00000461113 FAM74A1Q5RGS3 127 aa9.22□□□□□ -0.93
HDAC4-207ENST00000461113 OR4B1Q8NGF8 309 aa9.22□□□□□ -0.93
HDAC4-207ENST00000461113 C1QTNF4Q9BXJ3 329 aa9.22□□□□□ -0.93
HDAC4-207ENST00000461113 SH3BGRL3Q9H299 93 aa9.22□□□□□ -0.93
HDAC4-207ENST00000461113 SAV1Q9H4B6 383 aaPredicted RBP9.22□□□□□ -0.93
HDAC4-207ENST00000461113 RETNQ9HD89 108 aa9.22□□□□□ -0.93
HDAC4-207ENST00000461113 ZNF586Q9NXT0 402 aa9.22□□□□□ -0.93
HDAC4-207ENST00000461113 HLA-DRB4X5D2U9 266 aa9.22□□□□□ -0.93
HDAC4-207ENST00000461113 TRBV19A0A075B6N1 114 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 H3BMM0 161 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 H3BQ15 152 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 H3BTX0 84 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 CA1P00915 261 aaPredicted RBP9.21□□□□□ -0.94
HDAC4-207ENST00000461113 OR10J4P0C629 311 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 PYYP10082 97 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 CSN1S1P47710 185 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 IGFL4Q6B9Z1 124 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 Q6ZWC4 215 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 TRPT1Q86TN4 253 aaKnown RBP9.21□□□□□ -0.94
HDAC4-207ENST00000461113 RNF182Q8N6D2 247 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 OR10J6PQ8NGY7 276 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 RPUSD4Q96CM3 377 aaKnown RBP9.21□□□□□ -0.94
HDAC4-207ENST00000461113 FAM167A-AS1Q96KT0 104 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 C17orf77Q96MU5 243 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 CYTL1Q9NRR1 136 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 RFNGQ9Y644 331 aa9.21□□□□□ -0.94
HDAC4-207ENST00000461113 TRAV8-2A0A0B4J237 113 aa9.2□□□□□ -0.94
HDAC4-207ENST00000461113 A0A1B0GVG6 124 aa9.2□□□□□ -0.94
HDAC4-207ENST00000461113 UMAD1C9J7I0 102 aa9.2□□□□□ -0.94
HDAC4-207ENST00000461113 CXorf1O96002 111 aa9.2□□□□□ -0.94
HDAC4-207ENST00000461113 SEC11BP0C7V7 166 aa9.2□□□□□ -0.94
HDAC4-207ENST00000461113 IQCF2Q8IXL9 164 aa9.2□□□□□ -0.94
HDAC4-207ENST00000461113 BAP18Q8IXM2 172 aa9.2□□□□□ -0.94
HDAC4-207ENST00000461113 LYPD1Q8N2G4 141 aa9.2□□□□□ -0.94
HDAC4-207ENST00000461113 STOML3Q8TAV4 291 aa9.2□□□□□ -0.94
HDAC4-207ENST00000461113 RAB24Q969Q5 203 aa9.2□□□□□ -0.94
HDAC4-207ENST00000461113 MRPL53Q96EL3 112 aaKnown RBP9.2□□□□□ -0.94
HDAC4-207ENST00000461113 C20orf173Q96LM9 149 aa9.2□□□□□ -0.94
HDAC4-207ENST00000461113 TP53TG1Q9Y2A0 90 aa9.2□□□□□ -0.94
HDAC4-207ENST00000461113 A0A0J9YX75 114 aa9.19□□□□□ -0.94
HDAC4-207ENST00000461113 CTXND1A0A1B0GTU2 59 aa9.19□□□□□ -0.94
HDAC4-207ENST00000461113 SPRY2O43597 315 aa9.19□□□□□ -0.94
HDAC4-207ENST00000461113 IGKV3-20P01619 116 aa9.19□□□□□ -0.94
HDAC4-207ENST00000461113 HIST1H1AQ02539 215 aaPredicted RBP9.19□□□□□ -0.94
HDAC4-207ENST00000461113 LGALSLQ3ZCW2 172 aaPredicted RBP9.19□□□□□ -0.94
HDAC4-207ENST00000461113 OR8A1Q8NGG7 326 aa9.19□□□□□ -0.94
HDAC4-207ENST00000461113 FXYD5Q96DB9 178 aa9.19□□□□□ -0.94
HDAC4-207ENST00000461113 SAT2Q96F10 170 aaPredicted RBP9.19□□□□□ -0.94
HDAC4-207ENST00000461113 CLUHP3Q96NS8 147 aa9.19□□□□□ -0.94
HDAC4-207ENST00000461113 TMEM167BQ9NRX6 74 aa9.19□□□□□ -0.94
HDAC4-207ENST00000461113 SLC17A3O00476 420 aa9.18□□□□□ -0.94
HDAC4-207ENST00000461113 HMGB3O15347 200 aaKnown RBP9.18□□□□□ -0.94
HDAC4-207ENST00000461113 AMBPP02760 352 aa9.18□□□□□ -0.94
HDAC4-207ENST00000461113 STAG3L2P0CL84 134 aa9.18□□□□□ -0.94
HDAC4-207ENST00000461113 STAG3L3P0CL85 134 aa9.18□□□□□ -0.94
HDAC4-207ENST00000461113 RANP62826 216 aaKnown RBP9.18□□□□□ -0.94
HDAC4-207ENST00000461113 ICAM4Q14773 271 aa9.18□□□□□ -0.94
HDAC4-207ENST00000461113 DEFB135Q30KP9 77 aa9.18□□□□□ -0.94
HDAC4-207ENST00000461113 SLC51BQ86UW2 128 aa9.18□□□□□ -0.94
HDAC4-207ENST00000461113 CMTM2Q8TAZ6 248 aa9.18□□□□□ -0.94
HDAC4-207ENST00000461113 RXFP4Q8TDU9 374 aa9.18□□□□□ -0.94
HDAC4-207ENST00000461113 F6UB75 175 aa9.17□□□□□ -0.94
HDAC4-207ENST00000461113 ARL14EPLP0DKL9 152 aa9.17□□□□□ -0.94
HDAC4-207ENST00000461113 HLA-DMBP28068 263 aa9.17□□□□□ -0.94
HDAC4-207ENST00000461113 GCHFRP30047 84 aa9.17□□□□□ -0.94
HDAC4-207ENST00000461113 TSPOP30536 169 aa9.17□□□□□ -0.94
HDAC4-207ENST00000461113 RAB5CP51148 216 aa9.17□□□□□ -0.94
HDAC4-207ENST00000461113 CNN1P51911 297 aaKnown RBP9.17□□□□□ -0.94
HDAC4-207ENST00000461113 DPPA3Q6W0C5 159 aa9.17□□□□□ -0.94
HDAC4-207ENST00000461113 RNF183Q96D59 192 aa9.17□□□□□ -0.94
HDAC4-207ENST00000461113 ZNF705FA8MVS1 300 aaPredicted RBP9.16□□□□□ -0.94
HDAC4-207ENST00000461113 TEX46H3BTG2 121 aa9.16□□□□□ -0.94
HDAC4-207ENST00000461113 NDUFB4O95168 129 aa9.16□□□□□ -0.94
HDAC4-207ENST00000461113 DEFB1P60022 68 aa9.16□□□□□ -0.94
HDAC4-207ENST00000461113 GDF5OSQ5U4N7 250 aa9.16□□□□□ -0.94
HDAC4-207ENST00000461113 EXOC3-AS1Q8N2X6 119 aa9.16□□□□□ -0.94
HDAC4-207ENST00000461113 Q9H3A6 140 aa9.16□□□□□ -0.94
HDAC4-207ENST00000461113 OTORQ9NRC9 128 aa9.16□□□□□ -0.94
HDAC4-207ENST00000461113 GOLT1BQ9Y3E0 138 aa9.16□□□□□ -0.94
HDAC4-207ENST00000461113 MAP1LC3B2A6NCE7 125 aa9.15□□□□□ -0.94
HDAC4-207ENST00000461113 PGPA6NDG6 321 aa9.15□□□□□ -0.94
HDAC4-207ENST00000461113 EIF3GO75821 320 aaKnown RBP eCLIP9.15□□□□□ -0.94
HDAC4-207ENST00000461113 FAM213BQ8TBF2 198 aa9.15□□□□□ -0.94
HDAC4-207ENST00000461113 TMED6Q8WW62 240 aa9.15□□□□□ -0.94
HDAC4-207ENST00000461113 ZNF503Q96F45 646 aa9.15□□□□□ -0.94
HDAC4-207ENST00000461113 PHYHIPLQ96FC7 376 aa9.15□□□□□ -0.94
HDAC4-207ENST00000461113 LINC00477Q96M19 166 aa9.15□□□□□ -0.94
HDAC4-207ENST00000461113 RARRES2Q99969 163 aa9.15□□□□□ -0.94
HDAC4-207ENST00000461113 TMEM208Q9BTX3 173 aa9.15□□□□□ -0.94
HDAC4-207ENST00000461113 MAP1LC3BQ9GZQ8 125 aa9.15□□□□□ -0.94
HDAC4-207ENST00000461113 XCL2Q9UBD3 114 aa9.15□□□□□ -0.94
HDAC4-207ENST00000461113 BOLA2-SMG1P6H3BVE0 249 aa9.14□□□□□ -0.95
HDAC4-207ENST00000461113 K7EQM0 130 aa9.14□□□□□ -0.95
HDAC4-207ENST00000461113 M0R3E3 92 aa9.14□□□□□ -0.95
HDAC4-207ENST00000461113 ZNF705DP0CH99 300 aaPredicted RBP9.14□□□□□ -0.95
HDAC4-207ENST00000461113 ZNF705BP0CI00 300 aaPredicted RBP9.14□□□□□ -0.95
HDAC4-207ENST00000461113 LEPP41159 167 aa9.14□□□□□ -0.95
HDAC4-207ENST00000461113 FXYD7P58549 80 aa9.14□□□□□ -0.95
HDAC4-207ENST00000461113 TMEM78Q5T7P6 136 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms