RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 SOGA1O94964 1423 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 IGKV3-7A0A075B6H7 116 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 A0A096LPI6 279 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 C2orf70A6NJV1 201 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 UBL3O95164 117 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 MT-ND4LP03901 98 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 MT-ND6P03923 174 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 EVI2AP22794 236 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 CRYGSP22914 178 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 HIST1H1AQ02539 215 aaPredicted RBP1.35□□□□□ -2.19
VBP1-202ENST00000460509 RNASE10Q5GAN6 216 aaKnown RBP1.35□□□□□ -2.19
VBP1-202ENST00000460509 LINC00471Q8N535 108 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 FAM216BQ8N7L0 139 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 OR5H6Q8NGV6 325 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 OR4K15Q8NH41 348 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 CHCHD1Q96BP2 118 aaKnown RBP1.35□□□□□ -2.19
VBP1-202ENST00000460509 PRELID3AQ96N28 172 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 OR5AC2Q9NZP5 309 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 PAIP2BQ9ULR5 123 aaKnown RBP1.35□□□□□ -2.19
VBP1-202ENST00000460509 COL1A1P02452 1464 aaPredicted RBP1.35□□□□□ -2.19
VBP1-202ENST00000460509 VIRMAQ69YN4 1812 aaKnown RBP1.35□□□□□ -2.19
VBP1-202ENST00000460509 TAF1LQ8IZX4 1826 aa1.35□□□□□ -2.19
VBP1-202ENST00000460509 FREM1Q5H8C1 2179 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 TRAV12-1A0A0B4J245 112 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 C17orf112F2Z3M2 114 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 H3BMG7 143 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 PROSCO94903 275 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 TSPAN19P0C672 248 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 COX4I1P13073 169 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 IL9P15248 144 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 RAB5CP51148 216 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 FOXA3P55318 350 aaPredicted RBP1.34□□□□□ -2.19
VBP1-202ENST00000460509 MAXP61244 160 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 PDE6HQ13956 83 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 DEFB113Q30KQ7 82 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 GLYATL3Q5SZD4 288 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 C1orf134Q5TEV5 83 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 OR4B1Q8NGF8 309 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 HYLS1Q96M11 299 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 PFDN5Q99471 154 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 TSC22D3Q99576 134 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 LY96Q9Y6Y9 160 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 U3KQ87 197 aa1.34□□□□□ -2.19
VBP1-202ENST00000460509 KDM6AO15550 1401 aaPredicted RBP1.33□□□□□ -2.2
VBP1-202ENST00000460509 USP54Q70EL1 1684 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 FLG2Q5D862 2391 aaPredicted RBP1.33□□□□□ -2.2
VBP1-202ENST00000460509 A0A087WSZ3 146 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 ZNF727A8MUV8 499 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 K7EP13 123 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 TCRAP04437 139 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 PAEPP09466 180 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 FABP4P15090 132 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 DSCR4P56555 118 aaPredicted RBP1.33□□□□□ -2.2
VBP1-202ENST00000460509 KRTAP10-4P60372 401 aaPredicted RBP1.33□□□□□ -2.2
VBP1-202ENST00000460509 QRFPP83859 136 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 DIAPH2-AS1Q14236 149 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 TMEM244Q5VVB8 128 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 UNQ6190/PRO20217Q6UXQ8 127 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 LINC00311Q8N616 119 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 C15orf53Q8NAA6 179 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 OR4S1Q8NGB4 309 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 SMIM3Q9BZL3 60 aa1.33□□□□□ -2.2
VBP1-202ENST00000460509 DISP2A7MBM2 1401 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 ARHGAP31Q2M1Z3 1444 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 TNS3Q68CZ2 1445 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 PCDH15Q96QU1 1955 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 COL24A1Q17RW2 1714 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 hDV103S1A0JD37 113 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 C5orf58C9J3I9 102 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 M0R233 179 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 UQCRQO14949 82 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 MRPS14O60783 128 aaKnown RBP1.32□□□□□ -2.2
VBP1-202ENST00000460509 SLC25A5P05141 298 aaKnown RBP1.32□□□□□ -2.2
VBP1-202ENST00000460509 CCL4P13236 92 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 KDELR1P24390 212 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 MRPS36P82909 103 aaKnown RBP1.32□□□□□ -2.2
VBP1-202ENST00000460509 HSD17B12Q53GQ0 312 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 KRTAP26-1Q6PEX3 210 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 OR5D14Q8NGL3 314 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 OR4C6Q8NH72 309 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 PSMF1Q92530 271 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 MUCL1Q96DR8 90 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 BANF2Q9H503 90 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 CHCHD2Q9Y6H1 151 aaPredicted RBP1.32□□□□□ -2.2
VBP1-202ENST00000460509 SYNJ1O43426 1573 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 BAZ2BQ9UIF8 2168 aaKnown RBP1.32□□□□□ -2.2
VBP1-202ENST00000460509 CCDC171Q6TFL3 1326 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 MYOM3Q5VTT5 1437 aa1.32□□□□□ -2.2
VBP1-202ENST00000460509 E7EUB6 86 aa1.31□□□□□ -2.2
VBP1-202ENST00000460509 SAA1P0DJI8 122 aaPredicted RBP1.31□□□□□ -2.2
VBP1-202ENST00000460509 RNASE3P12724 160 aaKnown RBP1.31□□□□□ -2.2
VBP1-202ENST00000460509 DNAJB13P59910 316 aa1.31□□□□□ -2.2
VBP1-202ENST00000460509 SPCS2Q15005 226 aa1.31□□□□□ -2.2
VBP1-202ENST00000460509 HAGHLQ6PII5 290 aaPredicted RBP1.31□□□□□ -2.2
VBP1-202ENST00000460509 ZNF833PQ6ZTB9 187 aa1.31□□□□□ -2.2
VBP1-202ENST00000460509 ARPINQ7Z6K5 226 aa1.31□□□□□ -2.2
VBP1-202ENST00000460509 TSTD1Q8NFU3 115 aa1.31□□□□□ -2.2
VBP1-202ENST00000460509 OR2T35Q8NGX2 323 aa1.31□□□□□ -2.2
VBP1-202ENST00000460509 TMEM254Q8TBM7 123 aa1.31□□□□□ -2.2
VBP1-202ENST00000460509 SFT2D1Q8WV19 159 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms