RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 Q6ZSA8 131 aa11.5□□□□□ -0.57
UBE2D4-209ENST00000454428 ODF3Q96PU9 254 aa11.5□□□□□ -0.57
UBE2D4-209ENST00000454428 CIB3Q96Q77 187 aaPredicted RBP11.5□□□□□ -0.57
UBE2D4-209ENST00000454428 SLC50A1Q9BRV3 221 aa11.5□□□□□ -0.57
UBE2D4-209ENST00000454428 PRO0255Q9UI72 69 aa11.5□□□□□ -0.57
UBE2D4-209ENST00000454428 DUXBA0A1W2PPF3 345 aa11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 MED6O75586 246 aa11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 ATP6V1G2O95670 118 aa11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 C1QBP02746 253 aa11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 LEPP41159 167 aa11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 RPP30P78346 268 aaKnown RBP11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 MRPS10P82664 201 aaKnown RBP11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 FHL2Q14192 279 aa11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 MRPL23Q16540 153 aaKnown RBP11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 NEGR1Q7Z3B1 354 aa11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 Q8N814 137 aa11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 ZNF680Q8NEM1 530 aa11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 AP3S1Q92572 193 aa11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 C8orf49Q96NF6 230 aa11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 ARL6Q9H0F7 186 aa11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 ARV1Q9H2C2 271 aa11.49□□□□□ -0.57
UBE2D4-209ENST00000454428 ANKRD20A5PA0PJZ0 165 aa11.48□□□□□ -0.57
UBE2D4-209ENST00000454428 SMCO3A2RU48 225 aa11.48□□□□□ -0.57
UBE2D4-209ENST00000454428 ANXA3P12429 323 aa11.48□□□□□ -0.57
UBE2D4-209ENST00000454428 ANXA7P20073 488 aaKnown RBP11.48□□□□□ -0.57
UBE2D4-209ENST00000454428 EVI2AP22794 236 aa11.48□□□□□ -0.57
UBE2D4-209ENST00000454428 TCL1AP56279 114 aa11.48□□□□□ -0.57
UBE2D4-209ENST00000454428 ANXA2RQ3ZCQ2 193 aa11.48□□□□□ -0.57
UBE2D4-209ENST00000454428 MORN5Q5VZ52 161 aa11.48□□□□□ -0.57
UBE2D4-209ENST00000454428 SAT2Q96F10 170 aaPredicted RBP11.48□□□□□ -0.57
UBE2D4-209ENST00000454428 NAA50Q9GZZ1 169 aaKnown RBP11.48□□□□□ -0.57
UBE2D4-209ENST00000454428 HHLA3Q9XRX5 114 aa11.48□□□□□ -0.57
UBE2D4-209ENST00000454428 CRYGDP07320 174 aa11.47□□□□□ -0.57
UBE2D4-209ENST00000454428 IGLC2P0DOY2 106 aa11.47□□□□□ -0.57
UBE2D4-209ENST00000454428 SELENOTP62341 195 aa11.47□□□□□ -0.57
UBE2D4-209ENST00000454428 CTF1Q16619 201 aa11.47□□□□□ -0.57
UBE2D4-209ENST00000454428 LRTM2Q8N967 370 aa11.47□□□□□ -0.57
UBE2D4-209ENST00000454428 A0A087WXM4 84 aa11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 C7orf71A4D174 169 aa11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 H3BQ15 152 aa11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 K7EPK0 472 aa11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 K7EQD1 137 aa11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 CTDSPLO15194 276 aa11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 CCNKO75909 580 aa11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 CD300CQ08708 224 aa11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 C4orf46Q504U0 113 aa11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 LINC00305Q7Z4B0 112 aa11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 EIF4E3Q8N5X7 224 aaKnown RBP11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 SCGB3A2Q96PL1 93 aa11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 VGLL1Q99990 258 aa11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 MRPL16Q9NX20 251 aaKnown RBP11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 SCP2D1Q9UJQ7 156 aa11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 TP53TG3Q9ULZ0 132 aa11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 STRAPQ9Y3F4 350 aaKnown RBP11.46□□□□□ -0.57
UBE2D4-209ENST00000454428 TNXBP22105 4242 aa11.46□□□□□ -0.58
UBE2D4-209ENST00000454428 KLLNB2CW77 178 aa11.45□□□□□ -0.58
UBE2D4-209ENST00000454428 CTDSP2O14595 271 aa11.45□□□□□ -0.58
UBE2D4-209ENST00000454428 SLC25A5P05141 298 aaKnown RBP11.45□□□□□ -0.58
UBE2D4-209ENST00000454428 BTN1A1Q13410 526 aa11.45□□□□□ -0.58
UBE2D4-209ENST00000454428 Q6ZQT7 251 aa11.45□□□□□ -0.58
UBE2D4-209ENST00000454428 FAM19A4Q96LR4 140 aa11.45□□□□□ -0.58
UBE2D4-209ENST00000454428 VCX3AQ9NNX9 186 aa11.45□□□□□ -0.58
UBE2D4-209ENST00000454428 RABL2BQ9UNT1 228 aa11.45□□□□□ -0.58
UBE2D4-209ENST00000454428 SLC38A11Q08AI6 406 aa11.44□□□□□ -0.58
UBE2D4-209ENST00000454428 SLAQ13239 276 aa11.44□□□□□ -0.58
UBE2D4-209ENST00000454428 TMEM37Q8WXS4 190 aa11.44□□□□□ -0.58
UBE2D4-209ENST00000454428 MRPL32Q9BYC8 188 aaKnown RBP11.44□□□□□ -0.58
UBE2D4-209ENST00000454428 PXMP4Q9Y6I8 212 aa11.44□□□□□ -0.58
UBE2D4-209ENST00000454428 E5RGE8 158 aa11.43□□□□□ -0.58
UBE2D4-209ENST00000454428 PSCAO43653 123 aa11.43□□□□□ -0.58
UBE2D4-209ENST00000454428 OXTP01178 125 aa11.43□□□□□ -0.58
UBE2D4-209ENST00000454428 RRAS2P62070 204 aaPredicted RBP11.43□□□□□ -0.58
UBE2D4-209ENST00000454428 ERCC8Q13216 396 aa11.43□□□□□ -0.58
UBE2D4-209ENST00000454428 OPCMLQ14982 345 aa11.43□□□□□ -0.58
UBE2D4-209ENST00000454428 IBA57Q5T440 356 aaKnown RBP11.43□□□□□ -0.58
UBE2D4-209ENST00000454428 S100A7AQ86SG5 101 aa11.43□□□□□ -0.58
UBE2D4-209ENST00000454428 BPIFA4PQ86YQ2 179 aa11.43□□□□□ -0.58
UBE2D4-209ENST00000454428 C10orf126Q8N4M7 172 aa11.43□□□□□ -0.58
UBE2D4-209ENST00000454428 SRIP30626 198 aa11.42□□□□□ -0.58
UBE2D4-209ENST00000454428 ID3Q02535 119 aa11.42□□□□□ -0.58
UBE2D4-209ENST00000454428 WFDC2Q14508 124 aa11.42□□□□□ -0.58
UBE2D4-209ENST00000454428 TMEM128Q5BJH2 165 aa11.42□□□□□ -0.58
UBE2D4-209ENST00000454428 MCUBQ9NWR8 336 aa11.42□□□□□ -0.58
UBE2D4-209ENST00000454428 RCL1Q9Y2P8 373 aaKnown RBP11.42□□□□□ -0.58
UBE2D4-209ENST00000454428 PIGBOS1A0A0B4J2F0 54 aa11.41□□□□□ -0.58
UBE2D4-209ENST00000454428 RGS5O15539 181 aa11.41□□□□□ -0.58
UBE2D4-209ENST00000454428 GYPEP15421 78 aa11.41□□□□□ -0.58
UBE2D4-209ENST00000454428 POLR2GP62487 172 aaKnown RBP eCLIP11.41□□□□□ -0.58
UBE2D4-209ENST00000454428 PRR9Q5T870 116 aa11.41□□□□□ -0.58
UBE2D4-209ENST00000454428 PXDC1Q5TGL8 231 aa11.41□□□□□ -0.58
UBE2D4-209ENST00000454428 NPVFQ9HCQ7 196 aa11.41□□□□□ -0.58
UBE2D4-209ENST00000454428 RNF24Q9Y225 148 aa11.41□□□□□ -0.58
UBE2D4-209ENST00000454428 M0R3E3 92 aa11.4□□□□□ -0.58
UBE2D4-209ENST00000454428 HOXB5P09067 269 aa11.4□□□□□ -0.58
UBE2D4-209ENST00000454428 SFTA3P0C7M3 94 aa11.4□□□□□ -0.58
UBE2D4-209ENST00000454428 RNASE4P34096 147 aaKnown RBP11.4□□□□□ -0.58
UBE2D4-209ENST00000454428 IL18Q14116 193 aa11.4□□□□□ -0.58
UBE2D4-209ENST00000454428 IQCF2Q8IXL9 164 aa11.4□□□□□ -0.58
UBE2D4-209ENST00000454428 ZNF479Q96JC4 524 aa11.4□□□□□ -0.58
UBE2D4-209ENST00000454428 PSENENQ9NZ42 101 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms