RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 CDKN1BP46527 198 aa11.64□□□□□ -0.55
NCKIPSD-208ENST00000454134 ATP6V1FQ16864 119 aa11.64□□□□□ -0.55
NCKIPSD-208ENST00000454134 TMEM88Q6PEY1 159 aa11.64□□□□□ -0.55
NCKIPSD-208ENST00000454134 OR10J6PQ8NGY7 276 aa11.64□□□□□ -0.55
NCKIPSD-208ENST00000454134 OR5AC2Q9NZP5 309 aa11.64□□□□□ -0.55
NCKIPSD-208ENST00000454134 LYRM9A8MSI8 78 aa11.63□□□□□ -0.55
NCKIPSD-208ENST00000454134 INMT-MINDY4F8WBC2 141 aa11.63□□□□□ -0.55
NCKIPSD-208ENST00000454134 M0R2N4 97 aa11.63□□□□□ -0.55
NCKIPSD-208ENST00000454134 TAS2R60P59551 318 aa11.63□□□□□ -0.55
NCKIPSD-208ENST00000454134 GUK1Q16774 197 aa11.63□□□□□ -0.55
NCKIPSD-208ENST00000454134 GCSAMLQ5JQS6 135 aa11.63□□□□□ -0.55
NCKIPSD-208ENST00000454134 TMEM256Q8N2U0 113 aa11.63□□□□□ -0.55
NCKIPSD-208ENST00000454134 THAP6Q8TBB0 222 aa11.63□□□□□ -0.55
NCKIPSD-208ENST00000454134 CHAC2Q8WUX2 184 aa11.63□□□□□ -0.55
NCKIPSD-208ENST00000454134 DNAH6Q9C0G6 4158 aa11.63□□□□□ -0.55
NCKIPSD-208ENST00000454134 H0YIZ8 118 aa11.62□□□□□ -0.55
NCKIPSD-208ENST00000454134 J3KRW8 73 aa11.62□□□□□ -0.55
NCKIPSD-208ENST00000454134 UBE2DNLQ8IWF7 75 aa11.62□□□□□ -0.55
NCKIPSD-208ENST00000454134 OR5C1Q8NGR4 320 aa11.62□□□□□ -0.55
NCKIPSD-208ENST00000454134 NPCDR1Q9BY65 106 aa11.62□□□□□ -0.55
NCKIPSD-208ENST00000454134 E5RGE8 158 aa11.61□□□□□ -0.55
NCKIPSD-208ENST00000454134 PRAF2O60831 178 aa11.61□□□□□ -0.55
NCKIPSD-208ENST00000454134 MPDU1O75352 247 aa11.61□□□□□ -0.55
NCKIPSD-208ENST00000454134 RLN2P04090 185 aa11.61□□□□□ -0.55
NCKIPSD-208ENST00000454134 CT45A10P0DMU9 189 aa11.61□□□□□ -0.55
NCKIPSD-208ENST00000454134 PYYP10082 97 aa11.61□□□□□ -0.55
NCKIPSD-208ENST00000454134 CLINT1Q14677 625 aa11.61□□□□□ -0.55
NCKIPSD-208ENST00000454134 GFI1BQ5VTD9 330 aa11.61□□□□□ -0.55
NCKIPSD-208ENST00000454134 NMES1Q9C002 83 aa11.61□□□□□ -0.55
NCKIPSD-208ENST00000454134 IGLV2-18A0A075B6J9 118 aa11.6□□□□□ -0.55
NCKIPSD-208ENST00000454134 TRBV19A0A075B6N1 114 aa11.6□□□□□ -0.55
NCKIPSD-208ENST00000454134 M0R3E3 92 aa11.6□□□□□ -0.55
NCKIPSD-208ENST00000454134 H2BFSP57053 126 aa11.6□□□□□ -0.55
NCKIPSD-208ENST00000454134 C16orf74Q96GX8 76 aa11.6□□□□□ -0.55
NCKIPSD-208ENST00000454134 SLC25A31Q9H0C2 315 aa11.6□□□□□ -0.55
NCKIPSD-208ENST00000454134 NPIPB6E9PJ23 425 aa11.59□□□□□ -0.55
NCKIPSD-208ENST00000454134 F5H768 121 aa11.59□□□□□ -0.55
NCKIPSD-208ENST00000454134 H7BYZ3 331 aa11.59□□□□□ -0.55
NCKIPSD-208ENST00000454134 NDUFB4O95168 129 aa11.59□□□□□ -0.55
NCKIPSD-208ENST00000454134 RNASE8Q8TDE3 154 aaKnown RBP11.59□□□□□ -0.55
NCKIPSD-208ENST00000454134 BLNKQ8WV28 456 aa11.59□□□□□ -0.55
NCKIPSD-208ENST00000454134 MARVELD1Q9BSK0 173 aa11.59□□□□□ -0.55
NCKIPSD-208ENST00000454134 NOP10Q9NPE3 64 aaKnown RBP11.59□□□□□ -0.55
NCKIPSD-208ENST00000454134 TMEM14CQ9P0S9 112 aa11.59□□□□□ -0.55
NCKIPSD-208ENST00000454134 TIMM8BQ9Y5J9 83 aaPredicted RBP11.59□□□□□ -0.55
NCKIPSD-208ENST00000454134 TRAV12-3A0A0B4J271 114 aa11.58□□□□□ -0.56
NCKIPSD-208ENST00000454134 ZNF253O75346 499 aa11.58□□□□□ -0.56
NCKIPSD-208ENST00000454134 HIST1H1EP10412 219 aaKnown RBP11.58□□□□□ -0.56
NCKIPSD-208ENST00000454134 ERCC8Q13216 396 aa11.58□□□□□ -0.56
NCKIPSD-208ENST00000454134 MIR17HGQ75NE6 70 aa11.58□□□□□ -0.56
NCKIPSD-208ENST00000454134 EXOC3-AS1Q8N2X6 119 aa11.58□□□□□ -0.56
NCKIPSD-208ENST00000454134 TMEM263Q8WUH6 116 aaKnown RBP11.58□□□□□ -0.56
NCKIPSD-208ENST00000454134 PPP1R1CQ8WVI7 109 aa11.58□□□□□ -0.56
NCKIPSD-208ENST00000454134 C20orf144Q9BQM9 153 aa11.58□□□□□ -0.56
NCKIPSD-208ENST00000454134 SLC25A2Q9BXI2 301 aa11.58□□□□□ -0.56
NCKIPSD-208ENST00000454134 TIMM9Q9Y5J7 89 aa11.58□□□□□ -0.56
NCKIPSD-208ENST00000454134 SSNA1O43805 119 aa11.57□□□□□ -0.56
NCKIPSD-208ENST00000454134 LEPP41159 167 aa11.57□□□□□ -0.56
NCKIPSD-208ENST00000454134 CYCSP99999 105 aaKnown RBP11.57□□□□□ -0.56
NCKIPSD-208ENST00000454134 ZNF493Q6ZR52 646 aa11.57□□□□□ -0.56
NCKIPSD-208ENST00000454134 FAM167A-AS1Q96KT0 104 aa11.57□□□□□ -0.56
NCKIPSD-208ENST00000454134 WDR61Q9GZS3 305 aaKnown RBP11.57□□□□□ -0.56
NCKIPSD-208ENST00000454134 CBY3A6NI87 242 aa11.56□□□□□ -0.56
NCKIPSD-208ENST00000454134 ATP5G1P05496 136 aa11.56□□□□□ -0.56
NCKIPSD-208ENST00000454134 ATP5G3P48201 142 aa11.56□□□□□ -0.56
NCKIPSD-208ENST00000454134 DEFA1P59665 94 aa11.56□□□□□ -0.56
NCKIPSD-208ENST00000454134 DEFA3P59666 94 aa11.56□□□□□ -0.56
NCKIPSD-208ENST00000454134 CCDC28AQ8IWP9 274 aa11.56□□□□□ -0.56
NCKIPSD-208ENST00000454134 C15orf53Q8NAA6 179 aa11.56□□□□□ -0.56
NCKIPSD-208ENST00000454134 MRPL53Q96EL3 112 aaKnown RBP11.56□□□□□ -0.56
NCKIPSD-208ENST00000454134 ODF3Q96PU9 254 aa11.56□□□□□ -0.56
NCKIPSD-208ENST00000454134 ICAM4Q14773 271 aa11.55□□□□□ -0.56
NCKIPSD-208ENST00000454134 RNF212Q495C1 297 aa11.55□□□□□ -0.56
NCKIPSD-208ENST00000454134 LINC00336Q6ZUF6 198 aa11.55□□□□□ -0.56
NCKIPSD-208ENST00000454134 PRELID1Q9Y255 219 aa11.55□□□□□ -0.56
NCKIPSD-208ENST00000454134 IGKV2-40A0A087WW87 121 aaPredicted RBP11.54□□□□□ -0.56
NCKIPSD-208ENST00000454134 RTL8CO15255 209 aa11.54□□□□□ -0.56
NCKIPSD-208ENST00000454134 MPC2O95563 127 aa11.54□□□□□ -0.56
NCKIPSD-208ENST00000454134 NUDT3O95989 172 aa11.54□□□□□ -0.56
NCKIPSD-208ENST00000454134 IGKV2D-40P01614 121 aaPredicted RBP11.54□□□□□ -0.56
NCKIPSD-208ENST00000454134 OR10J4P0C629 311 aa11.54□□□□□ -0.56
NCKIPSD-208ENST00000454134 PDE6HQ13956 83 aa11.54□□□□□ -0.56
NCKIPSD-208ENST00000454134 LGALS9BQ3B8N2 356 aa11.54□□□□□ -0.56
NCKIPSD-208ENST00000454134 FAM122CQ6P4D5 195 aa11.54□□□□□ -0.56
NCKIPSD-208ENST00000454134 SMIM3Q9BZL3 60 aa11.54□□□□□ -0.56
NCKIPSD-208ENST00000454134 AGPAT4-IT1Q9H0P7 198 aa11.54□□□□□ -0.56
NCKIPSD-208ENST00000454134 AAMDCQ9H7C9 122 aa11.54□□□□□ -0.56
NCKIPSD-208ENST00000454134 NACAE9PAV3 2078 aa11.54□□□□□ -0.56
NCKIPSD-208ENST00000454134 GAGE12BA1L429 117 aa11.53□□□□□ -0.56
NCKIPSD-208ENST00000454134 GAGE7O76087 117 aa11.53□□□□□ -0.56
NCKIPSD-208ENST00000454134 NBEAP1P0C6P0 100 aa11.53□□□□□ -0.56
NCKIPSD-208ENST00000454134 GAGE12FP0CL80 117 aa11.53□□□□□ -0.56
NCKIPSD-208ENST00000454134 GAGE12GP0CL81 117 aa11.53□□□□□ -0.56
NCKIPSD-208ENST00000454134 GAGE12IP0CL82 117 aa11.53□□□□□ -0.56
NCKIPSD-208ENST00000454134 CD300CQ08708 224 aa11.53□□□□□ -0.56
NCKIPSD-208ENST00000454134 BTN1A1Q13410 526 aa11.53□□□□□ -0.56
NCKIPSD-208ENST00000454134 Q6ZR54 194 aa11.53□□□□□ -0.56
NCKIPSD-208ENST00000454134 ATP5SQ99766 215 aa11.53□□□□□ -0.56
NCKIPSD-208ENST00000454134 ATG101Q9BSB4 218 aa11.53□□□□□ -0.56
NCKIPSD-208ENST00000454134 OR51M1Q9H341 326 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms