RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 TIMM21Q9BVV7 248 aa11.27□□□□□ -0.6
RAPGEF3-205ENST00000449771 AHCTF1Q8WYP5 2266 aa11.27□□□□□ -0.61
RAPGEF3-205ENST00000449771 MST1LQ2TV78 715 aa11.27□□□□□ -0.61
RAPGEF3-205ENST00000449771 C9orf118A6NHY6 69 aa11.27□□□□□ -0.61
RAPGEF3-205ENST00000449771 FAM90A2PQ658T7 463 aa11.27□□□□□ -0.61
RAPGEF3-205ENST00000449771 THSD7BQ9C0I4 1608 aa11.26□□□□□ -0.61
RAPGEF3-205ENST00000449771 LGALS1P09382 135 aaKnown RBP11.26□□□□□ -0.61
RAPGEF3-205ENST00000449771 ARMS2P0C7Q2 107 aa11.26□□□□□ -0.61
RAPGEF3-205ENST00000449771 CGB3P0DN86 165 aa11.26□□□□□ -0.61
RAPGEF3-205ENST00000449771 Q6ZS49 121 aa11.26□□□□□ -0.61
RAPGEF3-205ENST00000449771 PRIMA1Q86XR5 153 aa11.26□□□□□ -0.61
RAPGEF3-205ENST00000449771 SYS1-DBNDD2H3BUS1 97 aa11.26□□□□□ -0.61
RAPGEF3-205ENST00000449771 K7EP34 96 aa11.26□□□□□ -0.61
RAPGEF3-205ENST00000449771 IFITM1P13164 125 aa11.26□□□□□ -0.61
RAPGEF3-205ENST00000449771 A0A0G2JRQ6 117 aa11.26□□□□□ -0.61
RAPGEF3-205ENST00000449771 AMN1Q8IY45 258 aa11.26□□□□□ -0.61
RAPGEF3-205ENST00000449771 LY6G6EA0A0G2JKS1 128 aa11.25□□□□□ -0.61
RAPGEF3-205ENST00000449771 LY6G5BQ8NDX9 201 aa11.25□□□□□ -0.61
RAPGEF3-205ENST00000449771 U3KQA8 63 aa11.25□□□□□ -0.61
RAPGEF3-205ENST00000449771 FNDC10F2Z333 226 aa11.25□□□□□ -0.61
RAPGEF3-205ENST00000449771 PDE6HQ13956 83 aa11.25□□□□□ -0.61
RAPGEF3-205ENST00000449771 C8orf49Q96NF6 230 aa11.25□□□□□ -0.61
RAPGEF3-205ENST00000449771 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
RAPGEF3-205ENST00000449771 LY96Q9Y6Y9 160 aa11.25□□□□□ -0.61
RAPGEF3-205ENST00000449771 TRBV25-1A0A075B6N4 114 aa11.25□□□□□ -0.61
RAPGEF3-205ENST00000449771 PAX9P55771 341 aa11.25□□□□□ -0.61
RAPGEF3-205ENST00000449771 HIST1H4AP62805 103 aaKnown RBP11.25□□□□□ -0.61
RAPGEF3-205ENST00000449771 PLA2G2CQ5R387 149 aa11.25□□□□□ -0.61
RAPGEF3-205ENST00000449771 GAGE7O76087 117 aa11.24□□□□□ -0.61
RAPGEF3-205ENST00000449771 GAGE12FP0CL80 117 aa11.24□□□□□ -0.61
RAPGEF3-205ENST00000449771 GAGE12GP0CL81 117 aa11.24□□□□□ -0.61
RAPGEF3-205ENST00000449771 GAGE12IP0CL82 117 aa11.24□□□□□ -0.61
RAPGEF3-205ENST00000449771 TCTEX1D4Q5JR98 221 aa11.24□□□□□ -0.61
RAPGEF3-205ENST00000449771 ZNF833PQ6ZTB9 187 aa11.24□□□□□ -0.61
RAPGEF3-205ENST00000449771 TMEM75Q8N9X5 138 aa11.24□□□□□ -0.61
RAPGEF3-205ENST00000449771 ANAPC10Q9UM13 185 aa11.24□□□□□ -0.61
RAPGEF3-205ENST00000449771 DUX4L9Q6RFH8 374 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF3-205ENST00000449771 MRPL27Q9P0M9 148 aaKnown RBP11.24□□□□□ -0.61
RAPGEF3-205ENST00000449771 IGLC2P0DOY2 106 aa11.23□□□□□ -0.61
RAPGEF3-205ENST00000449771 IGLC3P0DOY3 106 aa11.23□□□□□ -0.61
RAPGEF3-205ENST00000449771 C10orf91Q5T1B1 145 aa11.23□□□□□ -0.61
RAPGEF3-205ENST00000449771 C9JQL5 133 aa11.23□□□□□ -0.61
RAPGEF3-205ENST00000449771 CDPF1Q6NVV7 123 aa11.23□□□□□ -0.61
RAPGEF3-205ENST00000449771 ZNF318Q5VUA4 2279 aa11.23□□□□□ -0.61
RAPGEF3-205ENST00000449771 C2orf82Q6UX34 121 aa11.23□□□□□ -0.61
RAPGEF3-205ENST00000449771 PRSS33Q8NF86 280 aa11.23□□□□□ -0.61
RAPGEF3-205ENST00000449771 OVOL2Q9BRP0 275 aa11.23□□□□□ -0.61
RAPGEF3-205ENST00000449771 SPTA1P02549 2419 aa11.23□□□□□ -0.61
RAPGEF3-205ENST00000449771 YPEL3P61236 119 aaPredicted RBP11.23□□□□□ -0.61
RAPGEF3-205ENST00000449771 RHODO00212 210 aa11.22□□□□□ -0.61
RAPGEF3-205ENST00000449771 ZMAT4Q9H898 229 aa11.22□□□□□ -0.61
RAPGEF3-205ENST00000449771 GAGE6Q13070 117 aa11.22□□□□□ -0.61
RAPGEF3-205ENST00000449771 ZNF625Q96I27 306 aaPredicted RBP11.22□□□□□ -0.61
RAPGEF3-205ENST00000449771 B5MCH6 92 aa11.22□□□□□ -0.61
RAPGEF3-205ENST00000449771 Q6ZR03 302 aa11.22□□□□□ -0.61
RAPGEF3-205ENST00000449771 VWC2LB2RUY7 222 aa11.22□□□□□ -0.61
RAPGEF3-205ENST00000449771 F8W1H4 67 aa11.22□□□□□ -0.61
RAPGEF3-205ENST00000449771 Q6ZRM9 215 aa11.22□□□□□ -0.61
RAPGEF3-205ENST00000449771 STPG4Q8N801 248 aa11.22□□□□□ -0.61
RAPGEF3-205ENST00000449771 TRAV12-2A0A075B6T6 113 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 FAM120AOSQ5T036 256 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 NDUFA4L2Q9NRX3 87 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 NDUFA4O00483 81 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 CCL25O15444 150 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 LOXP28300 417 aaPredicted RBP11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 NBL1P41271 181 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 HAPLN4Q86UW8 402 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 NKAPP1Q8N9T2 125 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 MRAPQ8TCY5 172 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 LINC00479Q96M42 142 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 CHAC1Q9BUX1 264 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 IGHV1OR15-1A0A075B7D0 117 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 A0A1B0GUS0 222 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 PFN1P07737 140 aaKnown RBP11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 RPL32P62910 135 aaKnown RBP11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 C17orf58Q2M2W7 97 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 GFRA4Q9GZZ7 299 aa11.21□□□□□ -0.61
RAPGEF3-205ENST00000449771 CGB7P0DN87 165 aa11.21□□□□□ -0.62
RAPGEF3-205ENST00000449771 C8orf86Q6ZUL3 223 aa11.21□□□□□ -0.62
RAPGEF3-205ENST00000449771 SMIM20Q8N5G0 67 aa11.21□□□□□ -0.62
RAPGEF3-205ENST00000449771 TMEM14BQ9NUH8 114 aa11.21□□□□□ -0.62
RAPGEF3-205ENST00000449771 THAP8Q8NA92 274 aa11.2□□□□□ -0.62
RAPGEF3-205ENST00000449771 RNASE8Q8TDE3 154 aaKnown RBP11.2□□□□□ -0.62
RAPGEF3-205ENST00000449771 TRAV8-3A0A0A6YYJ7 113 aa11.2□□□□□ -0.62
RAPGEF3-205ENST00000449771 I3L3M4 83 aa11.2□□□□□ -0.62
RAPGEF3-205ENST00000449771 PROK2Q9HC23 129 aa11.2□□□□□ -0.62
RAPGEF3-205ENST00000449771 TP53TG1Q9Y2A0 90 aa11.2□□□□□ -0.62
RAPGEF3-205ENST00000449771 PMVKQ15126 192 aa11.2□□□□□ -0.62
RAPGEF3-205ENST00000449771 Q6ZWC4 215 aa11.2□□□□□ -0.62
RAPGEF3-205ENST00000449771 ESPL1Q14674 2120 aa11.2□□□□□ -0.62
RAPGEF3-205ENST00000449771 LMO1P25800 156 aa11.19□□□□□ -0.62
RAPGEF3-205ENST00000449771 Q0VG73 95 aa11.19□□□□□ -0.62
RAPGEF3-205ENST00000449771 IGKV1-6A0A0C4DH72 117 aa11.19□□□□□ -0.62
RAPGEF3-205ENST00000449771 TMEM213A2RRL7 107 aa11.19□□□□□ -0.62
RAPGEF3-205ENST00000449771 RMI2Q96E14 147 aa11.19□□□□□ -0.62
RAPGEF3-205ENST00000449771 TEX36Q5VZQ5 186 aa11.19□□□□□ -0.62
RAPGEF3-205ENST00000449771 ZDBF2Q9HCK1 2354 aa11.19□□□□□ -0.62
RAPGEF3-205ENST00000449771 IGHV3-38A0A0C4DH36 116 aa11.19□□□□□ -0.62
RAPGEF3-205ENST00000449771 TRACP01848 142 aa11.18□□□□□ -0.62
RAPGEF3-205ENST00000449771 ZNRF2Q8NHG8 242 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms