RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 CRYGCP07315 174 aa12.64□□□□□ -0.39
CNOT3-204ENST00000447684 LPAL2Q16609 132 aa12.64□□□□□ -0.39
CNOT3-204ENST00000447684 KLF17Q5JT82 389 aaPredicted RBP12.64□□□□□ -0.39
CNOT3-204ENST00000447684 LINC00574Q9H8X3 128 aa12.64□□□□□ -0.39
CNOT3-204ENST00000447684 MSRB1Q9NZV6 116 aa12.64□□□□□ -0.39
CNOT3-204ENST00000447684 DPM2O94777 84 aa12.64□□□□□ -0.39
CNOT3-204ENST00000447684 CNTFRP26992 372 aa12.64□□□□□ -0.39
CNOT3-204ENST00000447684 PRB3Q04118 309 aaPredicted RBP12.64□□□□□ -0.39
CNOT3-204ENST00000447684 TMEM178AQ8NBL3 297 aa12.64□□□□□ -0.39
CNOT3-204ENST00000447684 TM4SF5O14894 197 aa12.64□□□□□ -0.39
CNOT3-204ENST00000447684 TMEM30BQ3MIR4 351 aa12.64□□□□□ -0.39
CNOT3-204ENST00000447684 TTC9CQ8N5M4 171 aa12.64□□□□□ -0.39
CNOT3-204ENST00000447684 SCNM1Q9BWG6 230 aa12.64□□□□□ -0.39
CNOT3-204ENST00000447684 BOD1L1Q8NFC6 3051 aa12.63□□□□□ -0.39
CNOT3-204ENST00000447684 HOXB4P17483 251 aaPredicted RBP12.63□□□□□ -0.39
CNOT3-204ENST00000447684 MT-ATP8P03928 68 aa12.63□□□□□ -0.39
CNOT3-204ENST00000447684 GATA1P15976 413 aaPredicted RBP12.63□□□□□ -0.39
CNOT3-204ENST00000447684 SIGLEC15Q6ZMC9 328 aa12.63□□□□□ -0.39
CNOT3-204ENST00000447684 C8orf86Q6ZUL3 223 aa12.63□□□□□ -0.39
CNOT3-204ENST00000447684 TMEM158Q8WZ71 300 aa12.63□□□□□ -0.39
CNOT3-204ENST00000447684 LINC00312Q9Y6C7 94 aa12.63□□□□□ -0.39
CNOT3-204ENST00000447684 SPENQ96T58 3664 aaKnown RBP12.62□□□□□ -0.39
CNOT3-204ENST00000447684 ZDBF2Q9HCK1 2354 aa12.62□□□□□ -0.39
CNOT3-204ENST00000447684 CCL8P80075 99 aa12.62□□□□□ -0.39
CNOT3-204ENST00000447684 ZNF502Q8TBZ5 544 aa12.62□□□□□ -0.39
CNOT3-204ENST00000447684 GLMPQ8WWB7 406 aa12.62□□□□□ -0.39
CNOT3-204ENST00000447684 ZNF71Q9NQZ8 489 aaPredicted RBP12.62□□□□□ -0.39
CNOT3-204ENST00000447684 S4R3C0 116 aa12.62□□□□□ -0.39
CNOT3-204ENST00000447684 PKDREJQ9NTG1 2253 aa12.62□□□□□ -0.39
CNOT3-204ENST00000447684 RAI1Q7Z5J4 1906 aaPredicted RBP12.62□□□□□ -0.39
CNOT3-204ENST00000447684 RRN3P1Q2M238 152 aa12.62□□□□□ -0.39
CNOT3-204ENST00000447684 MRPL35Q9NZE8 188 aaKnown RBP12.62□□□□□ -0.39
CNOT3-204ENST00000447684 TMEM14CQ9P0S9 112 aa12.62□□□□□ -0.39
CNOT3-204ENST00000447684 CEP250Q9BV73 2442 aa12.61□□□□□ -0.39
CNOT3-204ENST00000447684 IGKV2-40A0A087WW87 121 aaPredicted RBP12.61□□□□□ -0.39
CNOT3-204ENST00000447684 NDUFA3O95167 84 aa12.61□□□□□ -0.39
CNOT3-204ENST00000447684 IGKV2D-40P01614 121 aaPredicted RBP12.61□□□□□ -0.39
CNOT3-204ENST00000447684 GATA3P23771 443 aa12.61□□□□□ -0.39
CNOT3-204ENST00000447684 Q8TAT8 98 aa12.61□□□□□ -0.39
CNOT3-204ENST00000447684 ZNF418Q8TF45 676 aaPredicted RBP12.61□□□□□ -0.39
CNOT3-204ENST00000447684 GPR179Q6PRD1 2367 aa12.61□□□□□ -0.39
CNOT3-204ENST00000447684 PRO0461Q9UI25 63 aa12.6□□□□□ -0.39
CNOT3-204ENST00000447684 CYSLTR1Q9Y271 337 aa12.6□□□□□ -0.39
CNOT3-204ENST00000447684 MUC3AQ02505 3323 aa12.6□□□□□ -0.39
CNOT3-204ENST00000447684 NCOR1O75376 2440 aa12.6□□□□□ -0.39
CNOT3-204ENST00000447684 ORM1P02763 201 aa12.6□□□□□ -0.39
CNOT3-204ENST00000447684 DLX1P56177 255 aa12.6□□□□□ -0.39
CNOT3-204ENST00000447684 FOXI1Q12951 378 aa12.6□□□□□ -0.39
CNOT3-204ENST00000447684 TMEM164Q5U3C3 297 aa12.6□□□□□ -0.39
CNOT3-204ENST00000447684 TMEM200BQ69YZ2 307 aa12.6□□□□□ -0.39
CNOT3-204ENST00000447684 AAMDCQ9H7C9 122 aa12.6□□□□□ -0.39
CNOT3-204ENST00000447684 SS18L2Q9UHA2 77 aa12.6□□□□□ -0.39
CNOT3-204ENST00000447684 A0A1W2PNU3 283 aaPredicted RBP12.59□□□□□ -0.39
CNOT3-204ENST00000447684 IGHV1-46P01743 117 aa12.59□□□□□ -0.39
CNOT3-204ENST00000447684 IL4P05112 153 aa12.59□□□□□ -0.39
CNOT3-204ENST00000447684 EGR2P11161 476 aaPredicted RBP12.59□□□□□ -0.39
CNOT3-204ENST00000447684 PROCRQ9UNN8 238 aa12.59□□□□□ -0.39
CNOT3-204ENST00000447684 LOC107984156A0A0G2JMH3 177 aa12.59□□□□□ -0.39
CNOT3-204ENST00000447684 ARL17AQ8IVW1 177 aa12.59□□□□□ -0.39
CNOT3-204ENST00000447684 RNF183Q96D59 192 aa12.59□□□□□ -0.39
CNOT3-204ENST00000447684 ZMAT4Q9H898 229 aa12.59□□□□□ -0.39
CNOT3-204ENST00000447684 DKK4Q9UBT3 224 aa12.59□□□□□ -0.39
CNOT3-204ENST00000447684 TRBV6-1A0A0K0K1D8 114 aa12.58□□□□□ -0.39
CNOT3-204ENST00000447684 TNFRSF6BO95407 300 aa12.58□□□□□ -0.39
CNOT3-204ENST00000447684 GATA4P43694 442 aa12.58□□□□□ -0.39
CNOT3-204ENST00000447684 PIFOQ8TCI5 191 aa12.58□□□□□ -0.39
CNOT3-204ENST00000447684 PGPEP1Q9NXJ5 209 aa12.58□□□□□ -0.39
CNOT3-204ENST00000447684 SLC25A15Q9Y619 301 aa12.58□□□□□ -0.39
CNOT3-204ENST00000447684 PTH2Q96A98 100 aa12.58□□□□□ -0.4
CNOT3-204ENST00000447684 RPEQ96AT9 228 aa12.58□□□□□ -0.4
CNOT3-204ENST00000447684 SHANK2-AS3Q9BTD1 123 aa12.58□□□□□ -0.4
CNOT3-204ENST00000447684 NCBP2LA6PVI3 153 aaKnown RBP12.58□□□□□ -0.4
CNOT3-204ENST00000447684 IGKV1-17P01599 117 aa12.58□□□□□ -0.4
CNOT3-204ENST00000447684 GLRXP35754 106 aa12.58□□□□□ -0.4
CNOT3-204ENST00000447684 MRGPRG-AS1Q2M3A8 158 aa12.58□□□□□ -0.4
CNOT3-204ENST00000447684 IGFL4Q6B9Z1 124 aa12.58□□□□□ -0.4
CNOT3-204ENST00000447684 CDIP1Q9H305 208 aa12.58□□□□□ -0.4
CNOT3-204ENST00000447684 IGHG3P01860 377 aa12.57□□□□□ -0.4
CNOT3-204ENST00000447684 PSMB2P49721 201 aa12.57□□□□□ -0.4
CNOT3-204ENST00000447684 TDHQ8IZJ6 230 aa12.57□□□□□ -0.4
CNOT3-204ENST00000447684 C1QTNF4Q9BXJ3 329 aa12.57□□□□□ -0.4
CNOT3-204ENST00000447684 DMXL2Q8TDJ6 3036 aa12.57□□□□□ -0.4
CNOT3-204ENST00000447684 XGP55808 180 aa12.57□□□□□ -0.4
CNOT3-204ENST00000447684 PLGLAQ15195 96 aa12.57□□□□□ -0.4
CNOT3-204ENST00000447684 ZZEF1O43149 2961 aa12.56□□□□□ -0.4
CNOT3-204ENST00000447684 SHISA9B4DS77 424 aa12.56□□□□□ -0.4
CNOT3-204ENST00000447684 ATP5LO75964 103 aa12.56□□□□□ -0.4
CNOT3-204ENST00000447684 PSMG4Q5JS54 123 aa12.56□□□□□ -0.4
CNOT3-204ENST00000447684 NFE4Q86UQ8 179 aa12.56□□□□□ -0.4
CNOT3-204ENST00000447684 NXT2Q9NPJ8 142 aaKnown RBP12.56□□□□□ -0.4
CNOT3-204ENST00000447684 SRSF1Q07955 248 aaKnown RBP eCLIP12.56□□□□□ -0.4
CNOT3-204ENST00000447684 MYOZ3Q8TDC0 251 aa12.56□□□□□ -0.4
CNOT3-204ENST00000447684 TACC2O95359 2948 aa12.55□□□□□ -0.4
CNOT3-204ENST00000447684 HOXA3O43365 443 aaPredicted RBP12.55□□□□□ -0.4
CNOT3-204ENST00000447684 ZNF80P51504 273 aaPredicted RBP12.55□□□□□ -0.4
CNOT3-204ENST00000447684 RNF185Q96GF1 192 aa12.55□□□□□ -0.4
CNOT3-204ENST00000447684 FBXL15Q9H469 300 aa12.55□□□□□ -0.4
CNOT3-204ENST00000447684 TGFAP01135 160 aa12.55□□□□□ -0.4
CNOT3-204ENST00000447684 FHL3Q13643 280 aa12.55□□□□□ -0.4
CNOT3-204ENST00000447684 Q6ZUT4 128 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms