RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 RPRMLQ8N4K4 120 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 RPP25LQ8N5L8 163 aaKnown RBP2.58□□□□□ -2
HMGB3P6-201ENST00000444896 DEFB108BQ8NET1 73 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 Q8WTZ3 238 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 ZNF714Q96N38 554 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 YPEL4Q96NS1 127 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 CCL13Q99616 98 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 ZNF430Q9H8G1 570 aaPredicted RBP2.58□□□□□ -2
HMGB3P6-201ENST00000444896 NPVFQ9HCQ7 196 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 DYNLRB1Q9NP97 96 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 BET1LQ9NYM9 111 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 RPUSD1Q9UJJ7 312 aaKnown RBP2.58□□□□□ -2
HMGB3P6-201ENST00000444896 ZNF257Q9Y2Q1 563 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 OR51B2Q9Y5P1 312 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 PXMP4Q9Y6I8 212 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 URGCP-MRPS24S4R325 110 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 ARL2-SNX15V9GYD0 113 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 CACNA1DQ01668 2161 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 TANC2Q9HCD6 1990 aa2.58□□□□□ -2
HMGB3P6-201ENST00000444896 RP1L1Q8IWN7 2480 aaPredicted RBP2.58□□□□□ -2
HMGB3P6-201ENST00000444896 PLCE1Q9P212 2302 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 ZFHX4Q86UP3 3567 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 TGIF2-C20orf24A0A0A6YYL0 155 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 MDFIC2A0A1B0GVS7 189 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 PPP5D1E7EU14 171 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 HMGB3O15347 200 aaKnown RBP2.57□□□□□ -2
HMGB3P6-201ENST00000444896 NDUFB3O43676 98 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 TSPAN13O95857 204 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 CA2P00918 260 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 IGKV1D-33P01593 117 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 IGKV1-33P01594 117 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 CXCL1P09341 107 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 OR4A8P0C604 315 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 STAG3L2P0CL84 134 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 STAG3L3P0CL85 134 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 ARL14EPLP0DKL9 152 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 CGB3P0DN86 165 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 CGB7P0DN87 165 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 CD99P14209 185 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 USF1P22415 310 aaPredicted RBP2.57□□□□□ -2
HMGB3P6-201ENST00000444896 SRP14P37108 136 aaKnown RBP2.57□□□□□ -2
HMGB3P6-201ENST00000444896 GALR1P47211 349 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 TAS2R45P59539 299 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 RPL23P62829 140 aaKnown RBP2.57□□□□□ -2
HMGB3P6-201ENST00000444896 RPL31P62899 125 aaKnown RBP2.57□□□□□ -2
HMGB3P6-201ENST00000444896 ERHP84090 104 aaKnown RBP2.57□□□□□ -2
HMGB3P6-201ENST00000444896 RPL19P84098 196 aaKnown RBP2.57□□□□□ -2
HMGB3P6-201ENST00000444896 PRCDQ00LT1 54 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 BSPH1Q075Z2 132 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 SSX2Q16385 188 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 CT45A1Q5HYN5 189 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 FAM201AQ5SY85 155 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 SPNS3Q6ZMD2 512 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 ZNF833PQ6ZTB9 187 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 PDPNQ86YL7 162 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 DOLPP1Q86YN1 238 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 VKORC1L1Q8N0U8 176 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 FAM216BQ8N7L0 139 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 ZNF439Q8NDP4 499 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 OR1L8Q8NGR8 309 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 OR10X1Q8NGY0 326 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 OR5B3Q8NH48 314 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 OR4A5Q8NH83 315 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 CT45A3Q8NHU0 189 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 VSTM2AQ8TAG5 236 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 C22orf15Q8WYQ4 148 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 H1FXQ92522 213 aaKnown RBP2.57□□□□□ -2
HMGB3P6-201ENST00000444896 MGST2Q99735 147 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 NDFIP1Q9BT67 221 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 GGTLC1Q9BX51 225 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 HINT2Q9BX68 163 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 COMMD5Q9GZQ3 224 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 LINC00574Q9H8X3 128 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 TMEM167BQ9NRX6 74 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 TMEM14BQ9NUH8 114 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 TMEM106BQ9NUM4 274 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 DOK5Q9P104 306 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 YTHDF2Q9Y5A9 579 aaKnown RBP2.57□□□□□ -2
HMGB3P6-201ENST00000444896 DOCK11Q5JSL3 2073 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 PRR14LQ5THK1 2151 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 CADP27708 2225 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 DIDO1Q9BTC0 2240 aaKnown RBP2.57□□□□□ -2
HMGB3P6-201ENST00000444896 BSNQ9UPA5 3926 aa2.57□□□□□ -2
HMGB3P6-201ENST00000444896 MAP1BP46821 2468 aaKnown RBP2.57□□□□□ -2
HMGB3P6-201ENST00000444896 CEP250Q9BV73 2442 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 RIF1Q5UIP0 2472 aaKnown RBP2.56□□□□□ -2
HMGB3P6-201ENST00000444896 TRAV9-1A0A075B6T8 112 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 IGHV3-74A0A0B4J1X5 117 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 TRAV3A0A0B4J244 114 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 H0Y8G0 127 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 UPK2O00526 184 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 HIST1H2BKO60814 126 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 YIF1AO95070 293 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 IGHV3-7P01780 117 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 TRGC2P03986 189 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 HIST1H2BJP06899 126 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 FABP1P07148 127 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 TRGC1P0CF51 173 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 SAA1P0DJI8 122 aaPredicted RBP2.56□□□□□ -2
HMGB3P6-201ENST00000444896 CT45A6P0DMU7 189 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms