RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 SDCBPO00560 298 aaPredicted RBP4.5□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 SRSF10O75494 262 aaKnown RBP4.5□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 IGLV3-19P01714 112 aa4.5□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 CBLN1P23435 193 aa4.5□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 MFAP2P55001 183 aa4.5□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 FOXA3P55318 350 aaPredicted RBP4.5□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 TMEM258P61165 79 aa4.5□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 DEFB110Q30KQ9 67 aa4.5□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 Q56UQ5 140 aa4.5□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 Q6AWC8 147 aa4.5□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 TSKUQ8WUA8 353 aa4.5□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 LIME1Q9H400 295 aa4.5□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 FAM60AQ9NP50 221 aa4.5□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 MDFIC2A0A1B0GVS7 189 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 A0A1B0GWA3 101 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 FAM24AA6NFZ4 105 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 C10orf142B7Z368 130 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 SOCS1O15524 211 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 PSMB8P28062 276 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 Q6ZUT4 128 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 RPS19BP1Q86WX3 136 aaKnown RBP4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 BPIFA4PQ86YQ2 179 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 OR10AC1Q8NH08 325 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 LSM10Q969L4 123 aaKnown RBP4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 VGLL1Q99990 258 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 ZNF747Q9BV97 191 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 C11orf68Q9H3H3 251 aaKnown RBP4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 TMEM131Q92545 1883 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 THADAQ6YHU6 1953 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 KIAA2026Q5HYC2 2103 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 TRAV27A0A087WT01 109 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 IGHV3OR16-9A0A0B4J2B5 98 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 MT-ATP8P03928 68 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 DYNLT3P51808 116 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 ATP5G2Q06055 141 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 MORN3Q6PF18 240 aaPredicted RBP4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 Q6ZS52 159 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 FOXL2NBQ6ZUU3 175 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 TMEM75Q8N9X5 138 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 OR5C1Q8NGR4 320 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 OR10J6PQ8NGY7 276 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 ATP6V0E2Q8NHE4 81 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 ZNF721Q8TF20 911 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 DPH3Q96FX2 82 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 AMELYQ99218 206 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 IL36BQ9NZH7 164 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 LINC00527Q9UJ94 153 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 ZNF835Q9Y2P0 537 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 ARL2-SNX15V9GYD0 113 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 MPDZO75970 2070 aa4.49□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 A0A0J9YW62 118 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 IZUMO1RA6ND01 250 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 C2orf70A6NJV1 201 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 COX8AP10176 69 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 CRYGSP22914 178 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 IGLV3-21P80748 117 aaPredicted RBP4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 SERF2P84101 59 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 ZNF90Q03938 601 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 SP6Q3SY56 376 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 C9orf153Q5TBE3 101 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 WDR86Q86TI4 376 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 C3orf22Q8N5N4 141 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 TMEM252Q8N6L7 170 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 NRACQ8N912 160 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 DEFB127Q9H1M4 99 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 EYSQ5T1H1 3165 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 RP1P56715 2156 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 UNC13CQ8NB66 2214 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 C12orf77C9JDV5 145 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 NDUFB2O95178 105 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 VDAC2P45880 294 aaPredicted RBP4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 ERVK-16P61578 105 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 DIAPH2-AS1Q14236 149 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 KLF17Q5JT82 389 aaPredicted RBP4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 HES3Q5TGS1 186 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 EBLN2Q6P2I7 272 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 AMTNQ6UX39 209 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 C2orf91Q6ZV80 131 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 FAM19A3Q7Z5A8 133 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 OR9G1Q8NH87 305 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 SPAG17Q6Q759 2223 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 PRUNE2Q8WUY3 3088 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 IGHV1OR15-9A0A0B4J2B8 117 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 A8MWV9 139 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 SYS1-DBNDD2H3BUS1 97 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 QRFPP83859 136 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 ERCC8Q13216 396 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 NNATQ16517 81 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 NFE4Q86UQ8 179 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 LYPD6Q86Y78 171 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 FAM19A2Q8N3H0 131 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 C11orf72Q8NBR9 251 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 OR4X2Q8NGF9 303 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 SCGB1C1Q8TD33 95 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 NAA60Q9H7X0 242 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 TAS2R4Q9NYW5 299 aa4.47□□□□□ -1.69
ALMS1-IT1-201ENST00000441587 EML5Q05BV3 1969 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms