RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 MRPL18Q9H0U6 180 aaKnown RBP16.23■□□□□ 0.19
PTPRF-207ENST00000436724 RNASE7Q9H1E1 156 aaKnown RBP16.23■□□□□ 0.19
PTPRF-207ENST00000436724 RNF24Q9Y225 148 aa16.23■□□□□ 0.19
PTPRF-207ENST00000436724 A0A0G2JLM5 398 aa16.23■□□□□ 0.19
PTPRF-207ENST00000436724 GRIFINA4D1Z8 144 aa16.23■□□□□ 0.19
PTPRF-207ENST00000436724 M0R3E3 92 aa16.23■□□□□ 0.19
PTPRF-207ENST00000436724 MGST1P10620 155 aaKnown RBP16.23■□□□□ 0.19
PTPRF-207ENST00000436724 TAS2R60P59551 318 aa16.23■□□□□ 0.19
PTPRF-207ENST00000436724 OSTCQ9NRP0 149 aa16.23■□□□□ 0.19
PTPRF-207ENST00000436724 TRAV8-1A0A0A6YYK1 113 aa16.22■□□□□ 0.19
PTPRF-207ENST00000436724 CMTM2Q8TAZ6 248 aa16.22■□□□□ 0.19
PTPRF-207ENST00000436724 SMR3AQ99954 134 aa16.22■□□□□ 0.19
PTPRF-207ENST00000436724 UBE2G1P62253 170 aa16.21■□□□□ 0.19
PTPRF-207ENST00000436724 TMEM183BQ1AE95 376 aa16.21■□□□□ 0.19
PTPRF-207ENST00000436724 REC114Q7Z4M0 266 aa16.21■□□□□ 0.19
PTPRF-207ENST00000436724 BAGE2Q86Y30 109 aa16.21■□□□□ 0.19
PTPRF-207ENST00000436724 METTL26Q96S19 204 aa16.21■□□□□ 0.19
PTPRF-207ENST00000436724 RPLP1P05386 114 aaKnown RBP16.21■□□□□ 0.19
PTPRF-207ENST00000436724 IGFL4Q6B9Z1 124 aa16.21■□□□□ 0.19
PTPRF-207ENST00000436724 GOLT1AQ6ZVE7 132 aa16.21■□□□□ 0.19
PTPRF-207ENST00000436724 TEX29Q8N6K0 151 aa16.21■□□□□ 0.19
PTPRF-207ENST00000436724 KLF12Q9Y4X4 402 aa16.21■□□□□ 0.19
PTPRF-207ENST00000436724 LINC00310P59036 64 aa16.2■□□□□ 0.18
PTPRF-207ENST00000436724 PDE6HQ13956 83 aa16.2■□□□□ 0.18
PTPRF-207ENST00000436724 A8MWP6 167 aa16.19■□□□□ 0.18
PTPRF-207ENST00000436724 Q71RC1 249 aaPredicted RBP16.19■□□□□ 0.18
PTPRF-207ENST00000436724 LYPD1Q8N2G4 141 aa16.19■□□□□ 0.18
PTPRF-207ENST00000436724 ZMAT5Q9UDW3 170 aaKnown RBP16.19■□□□□ 0.18
PTPRF-207ENST00000436724 DNAJC9-AS1A6NH13 148 aa16.19■□□□□ 0.18
PTPRF-207ENST00000436724 GNB1LQ9BYB4 327 aa16.19■□□□□ 0.18
PTPRF-207ENST00000436724 SNURFLB1AK76 121 aa16.18■□□□□ 0.18
PTPRF-207ENST00000436724 NDUFA4O00483 81 aa16.18■□□□□ 0.18
PTPRF-207ENST00000436724 CRISP2P16562 243 aa16.18■□□□□ 0.18
PTPRF-207ENST00000436724 RAB4BP61018 213 aa16.18■□□□□ 0.18
PTPRF-207ENST00000436724 ASCL2Q99929 193 aa16.18■□□□□ 0.18
PTPRF-207ENST00000436724 ESM1Q9NQ30 184 aa16.18■□□□□ 0.18
PTPRF-207ENST00000436724 FAM181BA6NEQ2 426 aa16.17■□□□□ 0.18
PTPRF-207ENST00000436724 IGLV2-11P01706 119 aa16.17■□□□□ 0.18
PTPRF-207ENST00000436724 HLA-DMBP28068 263 aa16.17■□□□□ 0.18
PTPRF-207ENST00000436724 S100A7P31151 101 aa16.17■□□□□ 0.18
PTPRF-207ENST00000436724 AAMDCQ9H7C9 122 aa16.17■□□□□ 0.18
PTPRF-207ENST00000436724 SERTAD4Q9NUC0 356 aa16.17■□□□□ 0.18
PTPRF-207ENST00000436724 PEF1Q9UBV8 284 aaKnown RBP16.17■□□□□ 0.18
PTPRF-207ENST00000436724 U3KQE9 123 aa16.17■□□□□ 0.18
PTPRF-207ENST00000436724 ZNF785A8K8V0 405 aa16.17■□□□□ 0.18
PTPRF-207ENST00000436724 SPINK4O60575 86 aa16.17■□□□□ 0.18
PTPRF-207ENST00000436724 SLC35B1P78383 322 aa16.17■□□□□ 0.18
PTPRF-207ENST00000436724 PRR27Q6MZM9 219 aa16.17■□□□□ 0.18
PTPRF-207ENST00000436724 FMC1Q96HJ9 113 aa16.17■□□□□ 0.18
PTPRF-207ENST00000436724 ESDP10768 282 aa16.16■□□□□ 0.18
PTPRF-207ENST00000436724 IQCJQ1A5X6 159 aa16.16■□□□□ 0.18
PTPRF-207ENST00000436724 IBA57Q5T440 356 aaKnown RBP16.16■□□□□ 0.18
PTPRF-207ENST00000436724 GPR82Q96P67 336 aa16.16■□□□□ 0.18
PTPRF-207ENST00000436724 Q8N2B8 174 aa16.16■□□□□ 0.18
PTPRF-207ENST00000436724 SMIM27A0A1W2PRY6 76 aa16.15■□□□□ 0.18
PTPRF-207ENST00000436724 DIRC3C9JPN6 131 aa16.15■□□□□ 0.18
PTPRF-207ENST00000436724 F2Z2F3 143 aa16.15■□□□□ 0.18
PTPRF-207ENST00000436724 SERF1AO75920 110 aa16.15■□□□□ 0.18
PTPRF-207ENST00000436724 LTAP01374 205 aa16.15■□□□□ 0.18
PTPRF-207ENST00000436724 TCL1AP56279 114 aa16.15■□□□□ 0.18
PTPRF-207ENST00000436724 PSG9Q00887 426 aa16.15■□□□□ 0.18
PTPRF-207ENST00000436724 Q0VG73 95 aa16.15■□□□□ 0.18
PTPRF-207ENST00000436724 TMEM136Q6ZRR5 245 aa16.15■□□□□ 0.18
PTPRF-207ENST00000436724 PRNTQ86SH4 94 aa16.15■□□□□ 0.18
PTPRF-207ENST00000436724 TMEM86BQ8N661 226 aa16.15■□□□□ 0.18
PTPRF-207ENST00000436724 TMEM89A2RUT3 159 aa16.14■□□□□ 0.17
PTPRF-207ENST00000436724 SCGB1D1O95968 90 aa16.14■□□□□ 0.17
PTPRF-207ENST00000436724 C1orf194Q5T5A4 169 aa16.14■□□□□ 0.17
PTPRF-207ENST00000436724 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.14■□□□□ 0.17
PTPRF-207ENST00000436724 MLST8Q9BVC4 326 aa16.14■□□□□ 0.17
PTPRF-207ENST00000436724 ZNF331Q9NQX6 463 aaPredicted RBP16.14■□□□□ 0.17
PTPRF-207ENST00000436724 FOXE3Q13461 319 aa16.14■□□□□ 0.17
PTPRF-207ENST00000436724 Q86TA4 180 aa16.14■□□□□ 0.17
PTPRF-207ENST00000436724 TMEM190Q8WZ59 177 aa16.14■□□□□ 0.17
PTPRF-207ENST00000436724 ZNF705FA8MVS1 300 aaPredicted RBP16.13■□□□□ 0.17
PTPRF-207ENST00000436724 EDN2P20800 178 aa16.13■□□□□ 0.17
PTPRF-207ENST00000436724 PAFAH1B2P68402 229 aa16.13■□□□□ 0.17
PTPRF-207ENST00000436724 TM4SF20Q53R12 229 aa16.13■□□□□ 0.17
PTPRF-207ENST00000436724 SELENOKQ9Y6D0 94 aa16.13■□□□□ 0.17
PTPRF-207ENST00000436724 CA1P00915 261 aaPredicted RBP16.13■□□□□ 0.17
PTPRF-207ENST00000436724 ELANEP08246 267 aa16.13■□□□□ 0.17
PTPRF-207ENST00000436724 LINC00322Q6ZN03 302 aaPredicted RBP16.13■□□□□ 0.17
PTPRF-207ENST00000436724 RNF182Q8N6D2 247 aa16.13■□□□□ 0.17
PTPRF-207ENST00000436724 NAT8BQ9UHF3 227 aa16.13■□□□□ 0.17
PTPRF-207ENST00000436724 NAGKQ9UJ70 344 aa16.13■□□□□ 0.17
PTPRF-207ENST00000436724 A0A087X0K7 114 aa16.12■□□□□ 0.17
PTPRF-207ENST00000436724 CD33P20138 364 aa16.12■□□□□ 0.17
PTPRF-207ENST00000436724 WDR73Q6P4I2 378 aa16.12■□□□□ 0.17
PTPRF-207ENST00000436724 C16orf54Q6UWD8 224 aa16.12■□□□□ 0.17
PTPRF-207ENST00000436724 Q6ZWC4 215 aa16.12■□□□□ 0.17
PTPRF-207ENST00000436724 HIVEP2P31629 2446 aa16.12■□□□□ 0.17
PTPRF-207ENST00000436724 IGKV2-40A0A087WW87 121 aaPredicted RBP16.11■□□□□ 0.17
PTPRF-207ENST00000436724 IGKV2D-40P01614 121 aaPredicted RBP16.11■□□□□ 0.17
PTPRF-207ENST00000436724 Q6ZSV7 163 aa16.11■□□□□ 0.17
PTPRF-207ENST00000436724 LINC00469Q8N7U9 141 aa16.11■□□□□ 0.17
PTPRF-207ENST00000436724 MYOZ3Q8TDC0 251 aa16.11■□□□□ 0.17
PTPRF-207ENST00000436724 GLMPQ8WWB7 406 aa16.11■□□□□ 0.17
PTPRF-207ENST00000436724 ZNF253O75346 499 aa16.11■□□□□ 0.17
PTPRF-207ENST00000436724 MT-ND6P03923 174 aa16.11■□□□□ 0.17
PTPRF-207ENST00000436724 RPL19P84098 196 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms