RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SDHCQ99643 169 aaPredicted RBP10.38□□□□□ -0.75
MSH5-208ENST00000429846 LINC00854A0A1B0GVQ3 168 aa10.37□□□□□ -0.75
MSH5-208ENST00000429846 SNURFLB1AK76 121 aa10.37□□□□□ -0.75
MSH5-208ENST00000429846 ZNF253O75346 499 aa10.37□□□□□ -0.75
MSH5-208ENST00000429846 IL7P13232 177 aa10.37□□□□□ -0.75
MSH5-208ENST00000429846 LEPP41159 167 aa10.37□□□□□ -0.75
MSH5-208ENST00000429846 OR5I1Q13606 314 aa10.37□□□□□ -0.75
MSH5-208ENST00000429846 MORN5Q5VZ52 161 aa10.37□□□□□ -0.75
MSH5-208ENST00000429846 OR1L4Q8NGR5 311 aa10.37□□□□□ -0.75
MSH5-208ENST00000429846 SAT2Q96F10 170 aaPredicted RBP10.37□□□□□ -0.75
MSH5-208ENST00000429846 PFDN5Q99471 154 aa10.37□□□□□ -0.75
MSH5-208ENST00000429846 PYGO2Q9BRQ0 406 aa10.37□□□□□ -0.75
MSH5-208ENST00000429846 UPK3BQ9BT76 320 aa10.37□□□□□ -0.75
MSH5-208ENST00000429846 C20orf85Q9H1P6 137 aa10.37□□□□□ -0.75
MSH5-208ENST00000429846 Q9H8V8 135 aa10.37□□□□□ -0.75
MSH5-208ENST00000429846 DNAJC4Q9NNZ3 241 aa10.37□□□□□ -0.75
MSH5-208ENST00000429846 TRAV26-1A0A087WT03 109 aa10.36□□□□□ -0.75
MSH5-208ENST00000429846 SNRPCP09234 159 aaKnown RBP10.36□□□□□ -0.75
MSH5-208ENST00000429846 PRB4P10163 310 aaPredicted RBP10.36□□□□□ -0.75
MSH5-208ENST00000429846 KIR3DS1Q14943 382 aa10.36□□□□□ -0.75
MSH5-208ENST00000429846 PARD6GQ9BYG4 376 aaPredicted RBP10.36□□□□□ -0.75
MSH5-208ENST00000429846 ABCA13Q86UQ4 5058 aa10.36□□□□□ -0.75
MSH5-208ENST00000429846 A0A1W2PPQ1 181 aa10.35□□□□□ -0.75
MSH5-208ENST00000429846 PRAC2D3DTV9 90 aa10.35□□□□□ -0.75
MSH5-208ENST00000429846 NPIPB6E9PJ23 425 aa10.35□□□□□ -0.75
MSH5-208ENST00000429846 H3BQ15 152 aa10.35□□□□□ -0.75
MSH5-208ENST00000429846 H3BTX0 84 aa10.35□□□□□ -0.75
MSH5-208ENST00000429846 BTF3P20290 206 aaKnown RBP10.35□□□□□ -0.75
MSH5-208ENST00000429846 BCAP31P51572 246 aa10.35□□□□□ -0.75
MSH5-208ENST00000429846 CAV2P51636 162 aa10.35□□□□□ -0.75
MSH5-208ENST00000429846 DAZ2Q13117 558 aaKnown RBP10.35□□□□□ -0.75
MSH5-208ENST00000429846 NRARPQ7Z6K4 114 aa10.35□□□□□ -0.75
MSH5-208ENST00000429846 MRPL53Q96EL3 112 aaKnown RBP10.35□□□□□ -0.75
MSH5-208ENST00000429846 Q9H3A6 140 aa10.35□□□□□ -0.75
MSH5-208ENST00000429846 UQCC1Q9NVA1 299 aa10.35□□□□□ -0.75
MSH5-208ENST00000429846 WDR83OSQ9Y284 106 aa10.35□□□□□ -0.75
MSH5-208ENST00000429846 LSM5Q9Y4Y9 91 aaKnown RBP10.35□□□□□ -0.75
MSH5-208ENST00000429846 GAGE12BA1L429 117 aa10.34□□□□□ -0.75
MSH5-208ENST00000429846 CCSO14618 274 aa10.34□□□□□ -0.75
MSH5-208ENST00000429846 GAGE7O76087 117 aa10.34□□□□□ -0.75
MSH5-208ENST00000429846 GAGE12FP0CL80 117 aa10.34□□□□□ -0.75
MSH5-208ENST00000429846 GAGE12GP0CL81 117 aa10.34□□□□□ -0.75
MSH5-208ENST00000429846 GAGE12IP0CL82 117 aa10.34□□□□□ -0.75
MSH5-208ENST00000429846 PVALBP20472 110 aaPredicted RBP10.34□□□□□ -0.75
MSH5-208ENST00000429846 VWC2Q2TAL6 325 aa10.34□□□□□ -0.75
MSH5-208ENST00000429846 MIC13Q5XKP0 118 aa10.34□□□□□ -0.75
MSH5-208ENST00000429846 C12orf45Q8N5I9 185 aaPredicted RBP10.34□□□□□ -0.75
MSH5-208ENST00000429846 ZNF680Q8NEM1 530 aa10.34□□□□□ -0.75
MSH5-208ENST00000429846 A0A0J9YY99 117 aa10.33□□□□□ -0.76
MSH5-208ENST00000429846 LYRM1O43325 122 aa10.33□□□□□ -0.76
MSH5-208ENST00000429846 SLC25A5P05141 298 aaKnown RBP10.33□□□□□ -0.76
MSH5-208ENST00000429846 CT45A10P0DMU9 189 aa10.33□□□□□ -0.76
MSH5-208ENST00000429846 HOXA5P20719 270 aa10.33□□□□□ -0.76
MSH5-208ENST00000429846 RPL29P47914 159 aaKnown RBP10.33□□□□□ -0.76
MSH5-208ENST00000429846 PDE6HQ13956 83 aa10.33□□□□□ -0.76
MSH5-208ENST00000429846 ZNF431Q8TF32 576 aaPredicted RBP10.33□□□□□ -0.76
MSH5-208ENST00000429846 CHAC2Q8WUX2 184 aa10.33□□□□□ -0.76
MSH5-208ENST00000429846 C18orf15Q96N68 181 aa10.33□□□□□ -0.76
MSH5-208ENST00000429846 C11orf1Q9H5F2 150 aa10.33□□□□□ -0.76
MSH5-208ENST00000429846 LYRM2Q9NU23 88 aaPredicted RBP10.33□□□□□ -0.76
MSH5-208ENST00000429846 MRPS16Q9Y3D3 137 aaKnown RBP10.33□□□□□ -0.76
MSH5-208ENST00000429846 TRBV19A0A075B6N1 114 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 TRAV12-3A0A0B4J271 114 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 C5orf51A6NDU8 294 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 FAM25EA8MYX2 175 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 J3KRW8 73 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 CST7O76096 145 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 S100A11P31949 105 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 SULT1A1P50225 295 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 HBG1P69891 147 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 HBG2P69892 147 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 STX12Q86Y82 276 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 KRTAP4-5Q9BYR2 181 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 SLC39A9Q9NUM3 307 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 ZNF586Q9NXT0 402 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 TMEM14CQ9P0S9 112 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 PRELID1Q9Y255 219 aa10.32□□□□□ -0.76
MSH5-208ENST00000429846 TRAV5A0A0B4J249 113 aa10.31□□□□□ -0.76
MSH5-208ENST00000429846 UBE2L5PA0A1B0GUS4 154 aa10.31□□□□□ -0.76
MSH5-208ENST00000429846 C7orf71A4D174 169 aa10.31□□□□□ -0.76
MSH5-208ENST00000429846 FAM24AA6NFZ4 105 aa10.31□□□□□ -0.76
MSH5-208ENST00000429846 PLA2G10O15496 165 aa10.31□□□□□ -0.76
MSH5-208ENST00000429846 TCRBP04435 133 aa10.31□□□□□ -0.76
MSH5-208ENST00000429846 BAXQ07812 192 aa10.31□□□□□ -0.76
MSH5-208ENST00000429846 ESRGQ1W209 222 aa10.31□□□□□ -0.76
MSH5-208ENST00000429846 MAPKAPK5-AS1Q8N8E1 139 aa10.31□□□□□ -0.76
MSH5-208ENST00000429846 C2orf50Q96LR7 162 aa10.31□□□□□ -0.76
MSH5-208ENST00000429846 LINC00467Q9BRT7 94 aa10.31□□□□□ -0.76
MSH5-208ENST00000429846 KRTAP1-5Q9BYS1 174 aa10.31□□□□□ -0.76
MSH5-208ENST00000429846 TMPRSS5Q9H3S3 457 aa10.31□□□□□ -0.76
MSH5-208ENST00000429846 NUDT15Q9NV35 164 aa10.31□□□□□ -0.76
MSH5-208ENST00000429846 KLLNB2CW77 178 aa10.3□□□□□ -0.76
MSH5-208ENST00000429846 MPDU1O75352 247 aa10.3□□□□□ -0.76
MSH5-208ENST00000429846 ANXA2RQ3ZCQ2 193 aa10.3□□□□□ -0.76
MSH5-208ENST00000429846 Q6ZTI0 123 aa10.3□□□□□ -0.76
MSH5-208ENST00000429846 SPATA12Q7Z6I5 190 aa10.3□□□□□ -0.76
MSH5-208ENST00000429846 C11orf72Q8NBR9 251 aa10.3□□□□□ -0.76
MSH5-208ENST00000429846 LINC00477Q96M19 166 aa10.3□□□□□ -0.76
MSH5-208ENST00000429846 TRGV2A0A075B6R0 118 aa10.29□□□□□ -0.76
MSH5-208ENST00000429846 TRAV6A0A075B6T7 132 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms