RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 LYRM9A8MSI8 78 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 RGS13O14921 159 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 CRXO43186 299 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-203ENST00000428014 INSP01308 110 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 HBE1P02100 147 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 SLC25A5P05141 298 aaKnown RBP6.58□□□□□ -1.36
SMC1A-203ENST00000428014 SPART-AS1P0CW21 52 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 RBMY1A1P0DJD3 496 aaKnown RBP6.58□□□□□ -1.36
SMC1A-203ENST00000428014 RBMY1CP0DJD4 496 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 TAS2R45P59539 299 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 RBMY1FQ15415 496 aaKnown RBP6.58□□□□□ -1.36
SMC1A-203ENST00000428014 LRRC37A5PQ49AS3 106 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 LGALS9CQ6DKI2 356 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 PQLC2Q6ZP29 291 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 TCTE3Q8IZS6 198 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 ZNF738Q8NE65 137 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 OR4B1Q8NGF8 309 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 TMED6Q8WW62 240 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 FAM167A-AS1Q96KT0 104 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 LINC00477Q96M19 166 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 LINC00467Q9BRT7 94 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 MBD2Q9UBB5 411 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 XCL2Q9UBD3 114 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 FUT9Q9Y231 359 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 LENEPQ9Y5L5 61 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 NPIPB6E9PJ23 425 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 H3BQ15 152 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 H7BYZ3 331 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 MBP02144 154 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 TAS2R60P59551 318 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 RHOBP62745 196 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 RRN3P1Q2M238 152 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 MORN5Q5VZ52 161 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 ZFAND6Q6FIF0 208 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 C1orf158Q8N1D5 194 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 OR2T35Q8NGX2 323 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 OR10J6PQ8NGY7 276 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 SCGB1C1Q8TD33 95 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 C2CD4CQ8TF44 421 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 ANAPC16Q96DE5 110 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 ST6GAL2Q96JF0 529 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 LYSTQ99698 3801 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 AAMDCQ9H7C9 122 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 ZNF586Q9NXT0 402 aa6.57□□□□□ -1.36
SMC1A-203ENST00000428014 DYNC2H1Q8NCM8 4307 aaKnown RBP6.57□□□□□ -1.36
SMC1A-203ENST00000428014 NDUFB4O95168 129 aa6.56□□□□□ -1.36
SMC1A-203ENST00000428014 NBEAP1P0C6P0 100 aa6.56□□□□□ -1.36
SMC1A-203ENST00000428014 CRISP2P16562 243 aa6.56□□□□□ -1.36
SMC1A-203ENST00000428014 M6PRP20645 277 aa6.56□□□□□ -1.36
SMC1A-203ENST00000428014 CLINT1Q14677 625 aa6.56□□□□□ -1.36
SMC1A-203ENST00000428014 ACOT6Q3I5F7 207 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-203ENST00000428014 KHDC3LQ587J8 217 aa6.56□□□□□ -1.36
SMC1A-203ENST00000428014 C9orf47Q6ZRZ4 202 aa6.56□□□□□ -1.36
SMC1A-203ENST00000428014 LINC00476Q8WZB0 136 aa6.56□□□□□ -1.36
SMC1A-203ENST00000428014 FAM19A4Q96LR4 140 aa6.56□□□□□ -1.36
SMC1A-203ENST00000428014 SLC35B3Q9H1N7 401 aa6.56□□□□□ -1.36
SMC1A-203ENST00000428014 OR51M1Q9H341 326 aa6.56□□□□□ -1.36
SMC1A-203ENST00000428014 SERTM2A0A1B0GWG4 89 aa6.55□□□□□ -1.36
SMC1A-203ENST00000428014 F6UB75 175 aa6.55□□□□□ -1.36
SMC1A-203ENST00000428014 TAAR5O14804 337 aa6.55□□□□□ -1.36
SMC1A-203ENST00000428014 PFDN1O60925 122 aa6.55□□□□□ -1.36
SMC1A-203ENST00000428014 LEPP41159 167 aa6.55□□□□□ -1.36
SMC1A-203ENST00000428014 SUN5Q8TC36 379 aa6.55□□□□□ -1.36
SMC1A-203ENST00000428014 RXFP4Q8TDU9 374 aa6.55□□□□□ -1.36
SMC1A-203ENST00000428014 GNPNAT1Q96EK6 184 aaPredicted RBP6.55□□□□□ -1.36
SMC1A-203ENST00000428014 C16orf74Q96GX8 76 aa6.55□□□□□ -1.36
SMC1A-203ENST00000428014 C18orf15Q96N68 181 aa6.55□□□□□ -1.36
SMC1A-203ENST00000428014 PYGO2Q9BRQ0 406 aa6.55□□□□□ -1.36
SMC1A-203ENST00000428014 SLC25A2Q9BXI2 301 aa6.55□□□□□ -1.36
SMC1A-203ENST00000428014 DKK2Q9UBU2 259 aa6.55□□□□□ -1.36
SMC1A-203ENST00000428014 TP53TG3Q9ULZ0 132 aa6.55□□□□□ -1.36
SMC1A-203ENST00000428014 FBLL1A6NHQ2 334 aaKnown RBP6.54□□□□□ -1.36
SMC1A-203ENST00000428014 KLLNB2CW77 178 aa6.54□□□□□ -1.36
SMC1A-203ENST00000428014 SLC17A3O00476 420 aa6.54□□□□□ -1.36
SMC1A-203ENST00000428014 C1QBP02746 253 aa6.54□□□□□ -1.36
SMC1A-203ENST00000428014 HLA-DMBP28068 263 aa6.54□□□□□ -1.36
SMC1A-203ENST00000428014 HIST1H1AQ02539 215 aaPredicted RBP6.54□□□□□ -1.36
SMC1A-203ENST00000428014 FAM74A1Q5RGS3 127 aa6.54□□□□□ -1.36
SMC1A-203ENST00000428014 RNF182Q8N6D2 247 aa6.54□□□□□ -1.36
SMC1A-203ENST00000428014 INO80EQ8NBZ0 244 aaPredicted RBP6.54□□□□□ -1.36
SMC1A-203ENST00000428014 TMEM263Q8WUH6 116 aaKnown RBP6.54□□□□□ -1.36
SMC1A-203ENST00000428014 RNF141Q8WVD5 230 aa6.54□□□□□ -1.36
SMC1A-203ENST00000428014 FXYD5Q96DB9 178 aa6.54□□□□□ -1.36
SMC1A-203ENST00000428014 PAXXQ9BUH6 204 aa6.54□□□□□ -1.36
SMC1A-203ENST00000428014 TNFSF18Q9UNG2 199 aa6.54□□□□□ -1.36
SMC1A-203ENST00000428014 LOC102723971A0A1B0GUV8 181 aa6.53□□□□□ -1.36
SMC1A-203ENST00000428014 HMSDA8MTL9 139 aa6.53□□□□□ -1.36
SMC1A-203ENST00000428014 G3V3Q6 166 aa6.53□□□□□ -1.36
SMC1A-203ENST00000428014 NANOS2P60321 138 aaKnown RBP6.53□□□□□ -1.36
SMC1A-203ENST00000428014 ZNF345Q14585 488 aa6.53□□□□□ -1.36
SMC1A-203ENST00000428014 SPINK13Q1W4C9 94 aa6.53□□□□□ -1.36
SMC1A-203ENST00000428014 C12orf74Q32Q52 190 aa6.53□□□□□ -1.36
SMC1A-203ENST00000428014 FFAR4Q5NUL3 377 aa6.53□□□□□ -1.36
SMC1A-203ENST00000428014 LINC00612Q8N6U2 182 aa6.53□□□□□ -1.36
SMC1A-203ENST00000428014 HYLS1Q96M11 299 aa6.53□□□□□ -1.36
SMC1A-203ENST00000428014 NIPSNAP3BQ9BS92 247 aa6.53□□□□□ -1.36
SMC1A-203ENST00000428014 TMEM208Q9BTX3 173 aa6.53□□□□□ -1.36
SMC1A-203ENST00000428014 FXYD6-FXYD2A0A087WZ82 144 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 BORCS7-ASMTA0A0B4J1R7 106 aa6.52□□□□□ -1.37
SMC1A-203ENST00000428014 TRAV5A0A0B4J249 113 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms