RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 HERVK_113P63121 156 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 GNG5P63218 68 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 C1orf61Q13536 156 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 FHL3Q13643 280 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 Q1RN00 199 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 ALKBH6Q3KRA9 238 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 VMA21Q3ZAQ7 101 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 HES3Q5TGS1 186 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 LYZL1Q6UWQ5 148 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 GOLT1AQ6ZVE7 132 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 FAM19A5Q7Z5A7 132 aaPredicted RBP4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 WFDC3Q8IUB2 231 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 C18orf15Q96N68 181 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 PIMREGQ9BSJ6 248 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 CNFNQ9BYD5 112 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 C21orf62Q9NYP8 219 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 CALYQ9NYX4 217 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 MRPL35Q9NZE8 188 aaKnown RBP4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 LRP4O75096 1905 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 IGHV3-15A0A0B4J1V0 119 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 IGHV1-69DA0A0B4J2H0 117 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 A0A0J9YW62 118 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 TRBV30A0A0K0K1B3 111 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 ZNF785A8K8V0 405 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 H0Y8X5 98 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 CRYGDP07320 174 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 CFC1BP0CG36 223 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 CFC1P0CG37 223 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 INAFM2P0DMQ5 153 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 LINC00694P0DN24 101 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 CD40P25942 277 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 HOXA4Q00056 320 aaPredicted RBP4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 LINC01620Q4KN68 170 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 TMEM155Q4W5P6 130 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 C2orf27AQ580R0 203 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 DEFB121Q5J5C9 76 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 TEX36Q5VZQ5 186 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 C2orf82Q6UX34 121 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 Q8N1Y9 231 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 BAALCQ8WXS3 180 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 SPRY4Q9C004 299 aa4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 FGF23Q9GZV9 251 aaPredicted RBP4.43□□□□□ -1.7
VTI1BP4-201ENST00000427516 CEP192Q8TEP8 1941 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 NCOA6Q14686 2063 aaPredicted RBP4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 LTBP2Q14767 1821 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 IGKV1OR2-108A0A075B7D4 117 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 FAM236AA0A1B0GUQ0 79 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 FAM236BA0A1B0GV22 79 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 LMO7DNF2Z398 122 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 CXCL13O43927 109 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 IGLV3-19P01714 112 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 CD7P09564 240 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 MALP21145 153 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 CNTFRP26992 372 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 GFERP55789 205 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 ZNF56Q15929 161 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 PVRIGQ6DKI7 326 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 C17orf82Q86X59 251 aaPredicted RBP4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 TDHQ8IZJ6 230 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 KIR2DL5BQ8NHK3 375 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 TMEM167AQ8TBQ9 72 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 NTN5Q8WTR8 489 aaPredicted RBP4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 IGFBPL1Q8WX77 278 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 PCSK5Q92824 1860 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 FLYWCH2Q96CP2 140 aaKnown RBP4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 SCGB3A1Q96QR1 104 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 SRSF8Q9BRL6 282 aaKnown RBP4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 SLC50A1Q9BRV3 221 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 SRXN1Q9BYN0 137 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 OBP2BQ9NPH6 170 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 NDUFA4L2Q9NRX3 87 aa4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 KLF13Q9Y2Y9 288 aaPredicted RBP4.42□□□□□ -1.7
VTI1BP4-201ENST00000427516 TRBV19A0A075B6N1 114 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 PSPNO60542 156 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 NDUFA3O95167 84 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 NDUFC2O95298 119 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 PATE4P0C8F1 98 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 IGLC6P0CF74 106 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 LGALS3P17931 250 aaKnown RBP4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 DLX1P56177 255 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 LOXL1Q08397 574 aaPredicted RBP4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 SIGLEC15Q6ZMC9 328 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 LINC00322Q6ZN03 302 aaPredicted RBP4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 IL17RELQ6ZVW7 336 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 SLC22A18ASQ8N1D0 253 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 RFESDQ8TAC1 157 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 TMEM141Q96I45 108 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 ODF3Q96PU9 254 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 ASCL2Q99929 193 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 U3KQE9 123 aa4.41□□□□□ -1.7
VTI1BP4-201ENST00000427516 IGHV1OR21-1A0A087WYE8 117 aa4.4□□□□□ -1.71
VTI1BP4-201ENST00000427516 TMSB15BA0A087X1C1 80 aa4.4□□□□□ -1.71
VTI1BP4-201ENST00000427516 IGHV3-43A0A0B4J1X8 118 aa4.4□□□□□ -1.71
VTI1BP4-201ENST00000427516 TRAV17A0A0B4J275 112 aa4.4□□□□□ -1.71
VTI1BP4-201ENST00000427516 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.71
VTI1BP4-201ENST00000427516 SDHAF1A6NFY7 115 aa4.4□□□□□ -1.71
VTI1BP4-201ENST00000427516 OVOL1O14753 267 aa4.4□□□□□ -1.71
VTI1BP4-201ENST00000427516 KLK10O43240 276 aa4.4□□□□□ -1.71
VTI1BP4-201ENST00000427516 SH2D1AO60880 128 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms