RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 L7N2F9 121 aa12.41□□□□□ -0.42
GPC1-203ENST00000425056 NUDT3O95989 172 aa12.41□□□□□ -0.42
GPC1-203ENST00000425056 SNRPCP09234 159 aaKnown RBP12.41□□□□□ -0.42
GPC1-203ENST00000425056 VAMP2P63027 116 aa12.41□□□□□ -0.42
GPC1-203ENST00000425056 KIR3DS1Q14943 382 aa12.41□□□□□ -0.42
GPC1-203ENST00000425056 C10orf113Q5VZT2 155 aa12.41□□□□□ -0.42
GPC1-203ENST00000425056 RNF141Q8WVD5 230 aa12.41□□□□□ -0.42
GPC1-203ENST00000425056 GPN1Q9HCN4 374 aaPredicted RBP12.41□□□□□ -0.42
GPC1-203ENST00000425056 NOP10Q9NPE3 64 aaKnown RBP12.41□□□□□ -0.42
GPC1-203ENST00000425056 PXMP4Q9Y6I8 212 aa12.41□□□□□ -0.42
GPC1-203ENST00000425056 NBDYA0A0U1RRE5 68 aa12.4□□□□□ -0.42
GPC1-203ENST00000425056 PRAC2D3DTV9 90 aa12.4□□□□□ -0.42
GPC1-203ENST00000425056 CAMLGP49069 296 aa12.4□□□□□ -0.42
GPC1-203ENST00000425056 GFI1BQ5VTD9 330 aa12.4□□□□□ -0.42
GPC1-203ENST00000425056 ZNF575Q86XF7 245 aa12.4□□□□□ -0.42
GPC1-203ENST00000425056 LINC00612Q8N6U2 182 aa12.4□□□□□ -0.42
GPC1-203ENST00000425056 OR10J6PQ8NGY7 276 aa12.4□□□□□ -0.42
GPC1-203ENST00000425056 SAT2Q96F10 170 aaPredicted RBP12.4□□□□□ -0.42
GPC1-203ENST00000425056 PARD6GQ9BYG4 376 aaPredicted RBP12.4□□□□□ -0.42
GPC1-203ENST00000425056 C11orf1Q9H5F2 150 aa12.4□□□□□ -0.42
GPC1-203ENST00000425056 LSM5Q9Y4Y9 91 aaKnown RBP12.4□□□□□ -0.42
GPC1-203ENST00000425056 H3BQ15 152 aa12.39□□□□□ -0.43
GPC1-203ENST00000425056 H3BTX0 84 aa12.39□□□□□ -0.43
GPC1-203ENST00000425056 CAV2P51636 162 aa12.39□□□□□ -0.43
GPC1-203ENST00000425056 CCL18P55774 89 aa12.39□□□□□ -0.43
GPC1-203ENST00000425056 RAB31Q13636 194 aa12.39□□□□□ -0.43
GPC1-203ENST00000425056 Q6ZRG5 221 aa12.39□□□□□ -0.43
GPC1-203ENST00000425056 ODF3Q96PU9 254 aa12.39□□□□□ -0.43
GPC1-203ENST00000425056 DNAJC4Q9NNZ3 241 aa12.39□□□□□ -0.43
GPC1-203ENST00000425056 WDR83OSQ9Y284 106 aa12.39□□□□□ -0.43
GPC1-203ENST00000425056 CST7O76096 145 aa12.38□□□□□ -0.43
GPC1-203ENST00000425056 BCAP31P51572 246 aa12.38□□□□□ -0.43
GPC1-203ENST00000425056 GUK1Q16774 197 aa12.38□□□□□ -0.43
GPC1-203ENST00000425056 VWC2Q2TAL6 325 aa12.38□□□□□ -0.43
GPC1-203ENST00000425056 MIC13Q5XKP0 118 aa12.38□□□□□ -0.43
GPC1-203ENST00000425056 ZNF431Q8TF32 576 aaPredicted RBP12.38□□□□□ -0.43
GPC1-203ENST00000425056 UQCC1Q9NVA1 299 aa12.38□□□□□ -0.43
GPC1-203ENST00000425056 LINC00588Q9Y4M8 146 aa12.38□□□□□ -0.43
GPC1-203ENST00000425056 FAM25EA8MYX2 175 aa12.37□□□□□ -0.43
GPC1-203ENST00000425056 NPIPB6E9PJ23 425 aa12.37□□□□□ -0.43
GPC1-203ENST00000425056 C6orf223Q8N319 242 aa12.37□□□□□ -0.43
GPC1-203ENST00000425056 OR1L4Q8NGR5 311 aa12.37□□□□□ -0.43
GPC1-203ENST00000425056 PFDN5Q99471 154 aa12.37□□□□□ -0.43
GPC1-203ENST00000425056 SEC22CQ9BRL7 303 aa12.37□□□□□ -0.43
GPC1-203ENST00000425056 RYR1P21817 5038 aa12.36□□□□□ -0.43
GPC1-203ENST00000425056 C5orf51A6NDU8 294 aa12.36□□□□□ -0.43
GPC1-203ENST00000425056 FAM24AA6NFZ4 105 aa12.36□□□□□ -0.43
GPC1-203ENST00000425056 ZNF253O75346 499 aa12.36□□□□□ -0.43
GPC1-203ENST00000425056 TNP2Q05952 138 aa12.36□□□□□ -0.43
GPC1-203ENST00000425056 CCDC28AQ8IWP9 274 aa12.36□□□□□ -0.43
GPC1-203ENST00000425056 C2orf50Q96LR7 162 aa12.36□□□□□ -0.43
GPC1-203ENST00000425056 LYRM2Q9NU23 88 aaPredicted RBP12.36□□□□□ -0.43
GPC1-203ENST00000425056 TRAV5A0A0B4J249 113 aa12.35□□□□□ -0.43
GPC1-203ENST00000425056 UBE2L5PA0A1B0GUS4 154 aa12.35□□□□□ -0.43
GPC1-203ENST00000425056 CT45A10P0DMU9 189 aa12.35□□□□□ -0.43
GPC1-203ENST00000425056 PVALBP20472 110 aaPredicted RBP12.35□□□□□ -0.43
GPC1-203ENST00000425056 LEPP41159 167 aa12.35□□□□□ -0.43
GPC1-203ENST00000425056 RPL29P47914 159 aaKnown RBP12.35□□□□□ -0.43
GPC1-203ENST00000425056 CLINT1Q14677 625 aa12.35□□□□□ -0.43
GPC1-203ENST00000425056 C12orf45Q8N5I9 185 aaPredicted RBP12.35□□□□□ -0.43
GPC1-203ENST00000425056 MRPL53Q96EL3 112 aaKnown RBP12.35□□□□□ -0.43
GPC1-203ENST00000425056 ZNF503Q96F45 646 aa12.35□□□□□ -0.43
GPC1-203ENST00000425056 SLC39A9Q9NUM3 307 aa12.35□□□□□ -0.43
GPC1-203ENST00000425056 ZNF586Q9NXT0 402 aa12.35□□□□□ -0.43
GPC1-203ENST00000425056 TRAV26-1A0A087WT03 109 aa12.34□□□□□ -0.43
GPC1-203ENST00000425056 SNURFLB1AK76 121 aa12.34□□□□□ -0.43
GPC1-203ENST00000425056 RLN2P04090 185 aa12.34□□□□□ -0.43
GPC1-203ENST00000425056 M6PRP20645 277 aa12.34□□□□□ -0.43
GPC1-203ENST00000425056 SULT1A1P50225 295 aa12.34□□□□□ -0.43
GPC1-203ENST00000425056 IL15RAQ13261 267 aa12.34□□□□□ -0.43
GPC1-203ENST00000425056 SSX7Q7RTT5 188 aa12.34□□□□□ -0.43
GPC1-203ENST00000425056 RXFP4Q8TDU9 374 aa12.34□□□□□ -0.43
GPC1-203ENST00000425056 CHAC2Q8WUX2 184 aa12.34□□□□□ -0.43
GPC1-203ENST00000425056 GNPNAT1Q96EK6 184 aaPredicted RBP12.34□□□□□ -0.43
GPC1-203ENST00000425056 PYGO2Q9BRQ0 406 aa12.34□□□□□ -0.43
GPC1-203ENST00000425056 IGSF23A1L1A6 192 aa12.33□□□□□ -0.44
GPC1-203ENST00000425056 J3KRW8 73 aa12.33□□□□□ -0.44
GPC1-203ENST00000425056 HOXA5P20719 270 aa12.33□□□□□ -0.44
GPC1-203ENST00000425056 S100A11P31949 105 aa12.33□□□□□ -0.44
GPC1-203ENST00000425056 S100A10P60903 97 aa12.33□□□□□ -0.44
GPC1-203ENST00000425056 BAXQ07812 192 aa12.33□□□□□ -0.44
GPC1-203ENST00000425056 OR5I1Q13606 314 aa12.33□□□□□ -0.44
GPC1-203ENST00000425056 STX12Q86Y82 276 aa12.33□□□□□ -0.44
GPC1-203ENST00000425056 TMEM252Q8N6L7 170 aa12.33□□□□□ -0.44
GPC1-203ENST00000425056 HSPG2P98160 4391 aa12.32□□□□□ -0.44
GPC1-203ENST00000425056 TRBV19A0A075B6N1 114 aa12.32□□□□□ -0.44
GPC1-203ENST00000425056 TRAV12-3A0A0B4J271 114 aa12.32□□□□□ -0.44
GPC1-203ENST00000425056 GAGE12BA1L429 117 aa12.32□□□□□ -0.44
GPC1-203ENST00000425056 H3BNG1 76 aa12.32□□□□□ -0.44
GPC1-203ENST00000425056 GAGE7O76087 117 aa12.32□□□□□ -0.44
GPC1-203ENST00000425056 GAGE12FP0CL80 117 aa12.32□□□□□ -0.44
GPC1-203ENST00000425056 GAGE12GP0CL81 117 aa12.32□□□□□ -0.44
GPC1-203ENST00000425056 GAGE12IP0CL82 117 aa12.32□□□□□ -0.44
GPC1-203ENST00000425056 HBG1P69891 147 aa12.32□□□□□ -0.44
GPC1-203ENST00000425056 HBG2P69892 147 aa12.32□□□□□ -0.44
GPC1-203ENST00000425056 DAZ2Q13117 558 aaKnown RBP12.32□□□□□ -0.44
GPC1-203ENST00000425056 RAB32Q13637 225 aa12.32□□□□□ -0.44
GPC1-203ENST00000425056 TMEM14CQ9P0S9 112 aa12.32□□□□□ -0.44
GPC1-203ENST00000425056 M0R3E3 92 aa12.31□□□□□ -0.44
GPC1-203ENST00000425056 SLC25A5P05141 298 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms