RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 TEX29Q8N6K0 151 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 ZNF740Q8NDX6 193 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 OR5C1Q8NGR4 320 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 OR13C6PQ8NH95 151 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 OR1F12Q8NHA8 337 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 PFN4Q8NHR9 129 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 CT45A3Q8NHU0 189 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 IL1F10Q8WWZ1 152 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 BAALCQ8WXS3 180 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 NAT6Q93015 286 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 RAB37Q96AX2 223 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 CLDN23Q96B33 292 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 ABHD14BQ96IU4 210 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 MCHR1Q99705 422 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 TMEM70Q9BUB7 260 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 IFI27L2Q9H2X8 130 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 MAP1LC3AQ9H492 121 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 WDR76Q9H967 626 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 TAS2R4Q9NYW5 299 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 HIGD1AQ9Y241 93 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 INSIG2Q9Y5U4 225 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 HEBP2Q9Y5Z4 205 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 LRP4O75096 1905 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 MYO7BQ6PIF6 2116 aa2.05□□□□□ -2.08
LINC01040-201ENST00000425048 FCGBPQ9Y6R7 5405 aaPredicted RBP2.04□□□□□ -2.08
LINC01040-201ENST00000425048 TRBV20OR9-2A0A075B6H5 130 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 TRBV20-1A0A075B6N2 111 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 CCL15-CCL14A0A0B4J2E2 113 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 CTXND1A0A1B0GTU2 59 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 TINCRA0A1B0GVN0 87 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 MDFIC2A0A1B0GVS7 189 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 TMEM14DPA8MWL7 114 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 TMEM262E9PQX1 116 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 PGLYRP1O75594 196 aaPredicted RBP2.04□□□□□ -2.08
LINC01040-201ENST00000425048 SLC25A14O95258 325 aaPredicted RBP2.04□□□□□ -2.08
LINC01040-201ENST00000425048 NAPSAO96009 420 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 OXTP01178 125 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 BGLAPP02818 100 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 DBIP07108 87 aaKnown RBP2.04□□□□□ -2.08
LINC01040-201ENST00000425048 SMIM13P0DJ93 91 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 CPMP14384 443 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 ATP1B2P14415 290 aaPredicted RBP2.04□□□□□ -2.08
LINC01040-201ENST00000425048 ORM2P19652 201 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 G6PCP35575 357 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 OPRK1P41145 380 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 KIR2DS2P43631 304 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 SNU13P55769 128 aaKnown RBP2.04□□□□□ -2.08
LINC01040-201ENST00000425048 DSCR4P56555 118 aaPredicted RBP2.04□□□□□ -2.08
LINC01040-201ENST00000425048 RPL31P62899 125 aaKnown RBP2.04□□□□□ -2.08
LINC01040-201ENST00000425048 BPTFQ12830 3046 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 VGLL4Q14135 290 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 CEACAM16Q2WEN9 425 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 IBA57Q5T440 356 aaKnown RBP2.04□□□□□ -2.08
LINC01040-201ENST00000425048 LINC01545Q5VT33 79 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 C1orf140Q5VVS0 124 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 CBLN3Q6UW01 205 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 C6orf223Q8N319 242 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 ZNF645Q8N7E2 425 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 VN1R2Q8NFZ6 395 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 OR4X2Q8NGF9 303 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 OR1L8Q8NGR8 309 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 LRRC29Q8WV35 223 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 PPDPFLQ8WWR9 84 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 FAM131CQ96AQ9 280 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 LINC00477Q96M19 166 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 NMNAT3Q96T66 252 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 ULBP3Q9BZM4 244 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 TMEM191AQ9H0A3 160 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 NAA60Q9H7X0 242 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 ENY2Q9NPA8 101 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 RABAC1Q9UI14 185 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 TIMM9Q9Y5J7 89 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 SOX21Q9Y651 276 aaPredicted RBP2.04□□□□□ -2.08
LINC01040-201ENST00000425048 ARL2-SNX15V9GYD0 113 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 V9GYV3 84 aa2.04□□□□□ -2.08
LINC01040-201ENST00000425048 LTBP2Q14767 1821 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 IGKV1D-8A0A087WSZ0 117 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 TRAV27A0A087WT01 109 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 TRAV5A0A0B4J249 113 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 TRAV4A0A0B4J268 109 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 ZNF816-ZNF321PA0A0X1KG74 233 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 A0A1B0GWB2 263 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 GGTLC3B5MD39 225 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 IGLL5B9A064 214 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 H3BSH0 61 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 K7EQS6 105 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 NPFFO15130 113 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 HSBP1O75506 76 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 OR2J3O76001 311 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 CST7O76096 145 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 APOMO95445 188 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 OR2H2O95918 312 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 HLA-DQA1P01909 254 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 APOA2P02652 100 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 IGLC6P0CF74 106 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 IFITM1P13164 125 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 PSMB3P49720 205 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 FXYD2P54710 66 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 DLX6P56179 175 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 HERVK_113P63121 156 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms