RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 TMEM97Q5BJF2 176 aa11.31□□□□□ -0.6
MSH5-206ENST00000423982 FA2HQ7L5A8 372 aa11.31□□□□□ -0.6
MSH5-206ENST00000423982 BCL6BQ8N143 479 aaPredicted RBP11.31□□□□□ -0.6
MSH5-206ENST00000423982 OTORQ9NRC9 128 aa11.31□□□□□ -0.6
MSH5-206ENST00000423982 TMEM213A2RRL7 107 aa11.31□□□□□ -0.6
MSH5-206ENST00000423982 LY6HO94772 140 aa11.31□□□□□ -0.6
MSH5-206ENST00000423982 IGLC1P0CG04 106 aa11.31□□□□□ -0.6
MSH5-206ENST00000423982 FGF6P10767 208 aa11.31□□□□□ -0.6
MSH5-206ENST00000423982 PRSS57Q6UWY2 283 aa11.31□□□□□ -0.6
MSH5-206ENST00000423982 WFDC3Q8IUB2 231 aa11.31□□□□□ -0.6
MSH5-206ENST00000423982 C8orf49Q96NF6 230 aa11.31□□□□□ -0.6
MSH5-206ENST00000423982 RABAC1Q9UI14 185 aa11.31□□□□□ -0.6
MSH5-206ENST00000423982 GCN1Q92616 2671 aaKnown RBP11.3□□□□□ -0.6
MSH5-206ENST00000423982 MEGF9Q9H1U4 602 aa11.3□□□□□ -0.6
MSH5-206ENST00000423982 TMEM133Q9H2Q1 129 aa11.3□□□□□ -0.6
MSH5-206ENST00000423982 PEF1Q9UBV8 284 aaKnown RBP11.3□□□□□ -0.6
MSH5-206ENST00000423982 DOPEY2Q9Y3R5 2298 aa11.3□□□□□ -0.6
MSH5-206ENST00000423982 PPIAL4EA0A075B759 164 aa11.3□□□□□ -0.6
MSH5-206ENST00000423982 C17orf100A8MU93 164 aa11.3□□□□□ -0.6
MSH5-206ENST00000423982 PPIAL4FP0DN26 164 aa11.3□□□□□ -0.6
MSH5-206ENST00000423982 LOXP28300 417 aaPredicted RBP11.3□□□□□ -0.6
MSH5-206ENST00000423982 C16orf54Q6UWD8 224 aa11.3□□□□□ -0.6
MSH5-206ENST00000423982 RAB37Q96AX2 223 aa11.3□□□□□ -0.6
MSH5-206ENST00000423982 FASNP49327 2511 aaKnown RBP11.3□□□□□ -0.6
MSH5-206ENST00000423982 D6R8Y8 96 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 FBN2P35556 2912 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 FAM71F2Q6NXP2 309 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 GAGE10A6NGK3 116 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 LYNX1G3V0Z9 82 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 H3BUT2 72 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 NDUFB3O43676 98 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 LYNX1P0DP58 116 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 SRSF1Q07955 248 aaKnown RBP eCLIP11.29□□□□□ -0.67e-7■■■□□ 15.3
MSH5-206ENST00000423982 AMN1Q8IY45 258 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 OR10AG1Q8NH19 301 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 UBTD1Q9HAC8 227 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 SIGLEC8Q9NYZ4 499 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 PTPN13Q12923 2485 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 TEX22C9J3V5 150 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 SMKR1H3BMG3 65 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 TMEM178BH3BS89 294 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 APOBEC3AP31941 199 aaPredicted RBP11.29□□□□□ -0.6
MSH5-206ENST00000423982 CACNG7P62955 275 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 ZNF672Q499Z4 452 aaPredicted RBP11.29□□□□□ -0.6
MSH5-206ENST00000423982 THYN1Q9P016 225 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 SIGLEC9Q9Y336 463 aa11.29□□□□□ -0.6
MSH5-206ENST00000423982 IGKV1-17P01599 117 aa11.28□□□□□ -0.6
MSH5-206ENST00000423982 HOXB4P17483 251 aaPredicted RBP11.28□□□□□ -0.6
MSH5-206ENST00000423982 DLX6P56179 175 aa11.28□□□□□ -0.6
MSH5-206ENST00000423982 RIGQ13278 110 aa11.28□□□□□ -0.6
MSH5-206ENST00000423982 TM4SF20Q53R12 229 aa11.28□□□□□ -0.6
MSH5-206ENST00000423982 PSG8Q9UQ74 426 aa11.28□□□□□ -0.6
MSH5-206ENST00000423982 MED13LQ71F56 2210 aa11.28□□□□□ -0.6
MSH5-206ENST00000423982 IGHV1-8P0DP01 117 aa11.28□□□□□ -0.6
MSH5-206ENST00000423982 CSN1S1P47710 185 aa11.28□□□□□ -0.6
MSH5-206ENST00000423982 PLP1P60201 277 aa11.28□□□□□ -0.6
MSH5-206ENST00000423982 PVRIGQ6DKI7 326 aa11.28□□□□□ -0.6
MSH5-206ENST00000423982 F11RQ9Y624 299 aaKnown RBP11.28□□□□□ -0.6
MSH5-206ENST00000423982 VSTM5A8MXK1 200 aa11.27□□□□□ -0.61
MSH5-206ENST00000423982 RPS20P60866 119 aaKnown RBP11.27□□□□□ -0.61
MSH5-206ENST00000423982 PCP2Q8IVA1 136 aa11.27□□□□□ -0.61
MSH5-206ENST00000423982 RASL11BQ9BPW5 248 aa11.27□□□□□ -0.61
MSH5-206ENST00000423982 CSTL1Q9H114 145 aa11.27□□□□□ -0.61
MSH5-206ENST00000423982 ARHGAP32A7KAX9 2087 aa11.27□□□□□ -0.61
MSH5-206ENST00000423982 TRBV19A0A075B6N1 114 aa11.27□□□□□ -0.61
MSH5-206ENST00000423982 MC5RP33032 325 aa11.27□□□□□ -0.61
MSH5-206ENST00000423982 LYZL1Q6UWQ5 148 aa11.27□□□□□ -0.61
MSH5-206ENST00000423982 SIGLEC15Q6ZMC9 328 aa11.27□□□□□ -0.61
MSH5-206ENST00000423982 SMIM15Q7Z3B0 74 aa11.27□□□□□ -0.61
MSH5-206ENST00000423982 LINC00311Q8N616 119 aa11.27□□□□□ -0.61
MSH5-206ENST00000423982 CRYGBP07316 175 aa11.26□□□□□ -0.61
MSH5-206ENST00000423982 LGALS7P47929 136 aa11.26□□□□□ -0.61
MSH5-206ENST00000423982 KLF17Q5JT82 389 aaPredicted RBP11.26□□□□□ -0.61
MSH5-206ENST00000423982 PPP1R27Q86WC6 154 aa11.26□□□□□ -0.61
MSH5-206ENST00000423982 I3L2K1 104 aa11.26□□□□□ -0.61
MSH5-206ENST00000423982 K7ERU9 68 aa11.25□□□□□ -0.61
MSH5-206ENST00000423982 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
MSH5-206ENST00000423982 TMEM155Q4W5P6 130 aa11.25□□□□□ -0.61
MSH5-206ENST00000423982 UFSP1Q6NVU6 142 aa11.25□□□□□ -0.61
MSH5-206ENST00000423982 FER1L6-AS1Q8NA97 138 aa11.25□□□□□ -0.61
MSH5-206ENST00000423982 TTTY13Q9BZ97 58 aa11.25□□□□□ -0.61
MSH5-206ENST00000423982 COX7A1P24310 79 aa11.25□□□□□ -0.61
MSH5-206ENST00000423982 NMUP48645 174 aa11.25□□□□□ -0.61
MSH5-206ENST00000423982 PSG3Q16557 428 aa11.25□□□□□ -0.61
MSH5-206ENST00000423982 PRELID3AQ96N28 172 aa11.25□□□□□ -0.61
MSH5-206ENST00000423982 TMEM14CQ9P0S9 112 aa11.25□□□□□ -0.61
MSH5-206ENST00000423982 TNFRSF13BO14836 293 aaPredicted RBP11.24□□□□□ -0.61
MSH5-206ENST00000423982 B9A039 149 aa11.24□□□□□ -0.61
MSH5-206ENST00000423982 GAS8-AS1O95177 125 aa11.24□□□□□ -0.61
MSH5-206ENST00000423982 FCGR2BP31994 310 aaPredicted RBP11.24□□□□□ -0.61
MSH5-206ENST00000423982 SEC11AP67812 179 aa11.24□□□□□ -0.61
MSH5-206ENST00000423982 C18orf15Q96N68 181 aa11.24□□□□□ -0.61
MSH5-206ENST00000423982 DKK2Q9UBU2 259 aa11.24□□□□□ -0.61
MSH5-206ENST00000423982 INSIG2Q9Y5U4 225 aa11.24□□□□□ -0.61
MSH5-206ENST00000423982 IGHV1-3A0A0C4DH29 117 aa11.23□□□□□ -0.61
MSH5-206ENST00000423982 C9orf118A6NHY6 69 aa11.23□□□□□ -0.61
MSH5-206ENST00000423982 NDUFS7O75251 213 aa11.23□□□□□ -0.61
MSH5-206ENST00000423982 IL4P05112 153 aa11.23□□□□□ -0.61
MSH5-206ENST00000423982 IGFL4Q6B9Z1 124 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms