RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TMEM263Q8WUH6 116 aaKnown RBP11.33□□□□□ -0.6
COL18A1-205ENST00000423214 MGST2Q99735 147 aa11.33□□□□□ -0.6
COL18A1-205ENST00000423214 SLC50A1Q9BRV3 221 aa11.33□□□□□ -0.6
COL18A1-205ENST00000423214 GGACTQ9BVM4 153 aa11.33□□□□□ -0.6
COL18A1-205ENST00000423214 C16orf90A8MZG2 172 aa11.32□□□□□ -0.6
COL18A1-205ENST00000423214 SNRPCP09234 159 aaKnown RBP11.32□□□□□ -0.6
COL18A1-205ENST00000423214 TNP2Q05952 138 aa11.32□□□□□ -0.6
COL18A1-205ENST00000423214 ZNF493Q6ZR52 646 aa11.32□□□□□ -0.6
COL18A1-205ENST00000423214 LINC00305Q7Z4B0 112 aa11.32□□□□□ -0.6
COL18A1-205ENST00000423214 OR10J6PQ8NGY7 276 aa11.32□□□□□ -0.6
COL18A1-205ENST00000423214 RNF141Q8WVD5 230 aa11.32□□□□□ -0.6
COL18A1-205ENST00000423214 GPN1Q9HCN4 374 aaPredicted RBP11.32□□□□□ -0.6
COL18A1-205ENST00000423214 NOP10Q9NPE3 64 aaKnown RBP11.32□□□□□ -0.6
COL18A1-205ENST00000423214 IGSF23A1L1A6 192 aa11.31□□□□□ -0.6
COL18A1-205ENST00000423214 H7BYZ3 331 aa11.31□□□□□ -0.6
COL18A1-205ENST00000423214 COX7A2P2O60397 106 aa11.31□□□□□ -0.6
COL18A1-205ENST00000423214 BPIFA4PQ86YQ2 179 aa11.31□□□□□ -0.6
COL18A1-205ENST00000423214 TMEM252Q8N6L7 170 aa11.31□□□□□ -0.6
COL18A1-205ENST00000423214 RNASE8Q8TDE3 154 aaKnown RBP11.31□□□□□ -0.6
COL18A1-205ENST00000423214 ZNF331Q9NQX6 463 aaPredicted RBP11.31□□□□□ -0.6
COL18A1-205ENST00000423214 INMT-MINDY4F8WBC2 141 aa11.3□□□□□ -0.6
COL18A1-205ENST00000423214 MRPS12O15235 138 aaKnown RBP11.3□□□□□ -0.6
COL18A1-205ENST00000423214 CAMLGP49069 296 aa11.3□□□□□ -0.6
COL18A1-205ENST00000423214 MIC13Q5XKP0 118 aa11.3□□□□□ -0.6
COL18A1-205ENST00000423214 CCDC28AQ8IWP9 274 aa11.3□□□□□ -0.6
COL18A1-205ENST00000423214 TMEM37Q8WXS4 190 aa11.3□□□□□ -0.6
COL18A1-205ENST00000423214 C20orf144Q9BQM9 153 aa11.3□□□□□ -0.6
COL18A1-205ENST00000423214 LYRM2Q9NU23 88 aaPredicted RBP11.3□□□□□ -0.6
COL18A1-205ENST00000423214 UQCC1Q9NVA1 299 aa11.3□□□□□ -0.6
COL18A1-205ENST00000423214 LINC00588Q9Y4M8 146 aa11.3□□□□□ -0.6
COL18A1-205ENST00000423214 ABCA13Q86UQ4 5058 aa11.3□□□□□ -0.6
COL18A1-205ENST00000423214 SULT1A1P50225 295 aa11.29□□□□□ -0.6
COL18A1-205ENST00000423214 MORN5Q5VZ52 161 aa11.29□□□□□ -0.6
COL18A1-205ENST00000423214 SSX7Q7RTT5 188 aa11.29□□□□□ -0.6
COL18A1-205ENST00000423214 GNPNAT1Q96EK6 184 aaPredicted RBP11.29□□□□□ -0.6
COL18A1-205ENST00000423214 UBE2L5PA0A1B0GUS4 154 aa11.28□□□□□ -0.6
COL18A1-205ENST00000423214 SNURFLB1AK76 121 aa11.28□□□□□ -0.6
COL18A1-205ENST00000423214 H3BTX0 84 aa11.28□□□□□ -0.6
COL18A1-205ENST00000423214 S100A11P31949 105 aa11.28□□□□□ -0.6
COL18A1-205ENST00000423214 BAXQ07812 192 aa11.28□□□□□ -0.6
COL18A1-205ENST00000423214 OR5I1Q13606 314 aa11.28□□□□□ -0.6
COL18A1-205ENST00000423214 RAB31Q13636 194 aa11.28□□□□□ -0.6
COL18A1-205ENST00000423214 LRRC37A5PQ49AS3 106 aa11.28□□□□□ -0.6
COL18A1-205ENST00000423214 TTC32Q5I0X7 151 aa11.28□□□□□ -0.6
COL18A1-205ENST00000423214 C10orf113Q5VZT2 155 aa11.28□□□□□ -0.6
COL18A1-205ENST00000423214 PARD6GQ9BYG4 376 aaPredicted RBP11.28□□□□□ -0.6
COL18A1-205ENST00000423214 WDR83OSQ9Y284 106 aa11.28□□□□□ -0.6
COL18A1-205ENST00000423214 PXMP4Q9Y6I8 212 aa11.28□□□□□ -0.6
COL18A1-205ENST00000423214 HSPG2P98160 4391 aa11.28□□□□□ -0.6
COL18A1-205ENST00000423214 TRAV5A0A0B4J249 113 aa11.27□□□□□ -0.61
COL18A1-205ENST00000423214 J3KRW8 73 aa11.27□□□□□ -0.61
COL18A1-205ENST00000423214 SLC17A3O00476 420 aa11.27□□□□□ -0.61
COL18A1-205ENST00000423214 RLN2P04090 185 aa11.27□□□□□ -0.61
COL18A1-205ENST00000423214 M6PRP20645 277 aa11.27□□□□□ -0.61
COL18A1-205ENST00000423214 NHLH2Q02577 135 aa11.27□□□□□ -0.61
COL18A1-205ENST00000423214 VWC2Q2TAL6 325 aa11.27□□□□□ -0.61
COL18A1-205ENST00000423214 GFI1BQ5VTD9 330 aa11.27□□□□□ -0.61
COL18A1-205ENST00000423214 Q6ZRG5 221 aa11.27□□□□□ -0.61
COL18A1-205ENST00000423214 STX12Q86Y82 276 aa11.27□□□□□ -0.61
COL18A1-205ENST00000423214 DNAJC4Q9NNZ3 241 aa11.27□□□□□ -0.61
COL18A1-205ENST00000423214 BATF3Q9NR55 127 aa11.27□□□□□ -0.61
COL18A1-205ENST00000423214 TRAV26-1A0A087WT03 109 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 GAGE12BA1L429 117 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 PRAF2O60831 178 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 GAGE7O76087 117 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 GAGE12FP0CL80 117 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 GAGE12GP0CL81 117 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 GAGE12IP0CL82 117 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 FGF7P21781 194 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 LEPP41159 167 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 HBG1P69891 147 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 HBG2P69892 147 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 KIR3DS1Q14943 382 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 OPCMLQ14982 345 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 MARVELD1Q9BSK0 173 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 OR5AC2Q9NZP5 309 aa11.26□□□□□ -0.61
COL18A1-205ENST00000423214 A0A0J9YY99 117 aa11.25□□□□□ -0.61
COL18A1-205ENST00000423214 H0YIZ8 118 aa11.25□□□□□ -0.61
COL18A1-205ENST00000423214 CDK2AP2O75956 126 aa11.25□□□□□ -0.61
COL18A1-205ENST00000423214 DEFA1P59665 94 aa11.25□□□□□ -0.61
COL18A1-205ENST00000423214 DEFA3P59666 94 aa11.25□□□□□ -0.61
COL18A1-205ENST00000423214 RXFP4Q8TDU9 374 aa11.25□□□□□ -0.61
COL18A1-205ENST00000423214 NMES1Q9C002 83 aa11.25□□□□□ -0.61
COL18A1-205ENST00000423214 SLC39A9Q9NUM3 307 aa11.25□□□□□ -0.61
COL18A1-205ENST00000423214 PRAC2D3DTV9 90 aa11.24□□□□□ -0.61
COL18A1-205ENST00000423214 IGLC2P0DOY2 106 aa11.24□□□□□ -0.61
COL18A1-205ENST00000423214 RPL29P47914 159 aaKnown RBP11.24□□□□□ -0.61
COL18A1-205ENST00000423214 H2BFSP57053 126 aa11.24□□□□□ -0.61
COL18A1-205ENST00000423214 GUK1Q16774 197 aa11.24□□□□□ -0.61
COL18A1-205ENST00000423214 ATP6V1FQ16864 119 aa11.24□□□□□ -0.61
COL18A1-205ENST00000423214 OR1L4Q8NGR5 311 aa11.24□□□□□ -0.61
COL18A1-205ENST00000423214 ZNF503Q96F45 646 aa11.24□□□□□ -0.61
COL18A1-205ENST00000423214 PFDN5Q99471 154 aa11.24□□□□□ -0.61
COL18A1-205ENST00000423214 Q9H8V8 135 aa11.24□□□□□ -0.61
COL18A1-205ENST00000423214 TRAV12-3A0A0B4J271 114 aa11.23□□□□□ -0.61
COL18A1-205ENST00000423214 E5RGE8 158 aa11.23□□□□□ -0.61
COL18A1-205ENST00000423214 H3BQ15 152 aa11.23□□□□□ -0.61
COL18A1-205ENST00000423214 SSNA1O43805 119 aa11.23□□□□□ -0.61
COL18A1-205ENST00000423214 LINC00612Q8N6U2 182 aa11.23□□□□□ -0.61
COL18A1-205ENST00000423214 MAPKAPK5-AS1Q8N8E1 139 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms