RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 GFI1BQ5VTD9 330 aa12.93□□□□□ -0.34
SREBF1-206ENST00000423161 MIC13Q5XKP0 118 aa12.93□□□□□ -0.34
SREBF1-206ENST00000423161 Q6ZRG5 221 aa12.93□□□□□ -0.34
SREBF1-206ENST00000423161 ZNF575Q86XF7 245 aa12.93□□□□□ -0.34
SREBF1-206ENST00000423161 DNAJC4Q9NNZ3 241 aa12.93□□□□□ -0.34
SREBF1-206ENST00000423161 DNAH11Q96DT5 4516 aa12.92□□□□□ -0.34
SREBF1-206ENST00000423161 TCRBP04435 133 aa12.92□□□□□ -0.34
SREBF1-206ENST00000423161 CLINT1Q14677 625 aa12.92□□□□□ -0.34
SREBF1-206ENST00000423161 CCDC28AQ8IWP9 274 aa12.92□□□□□ -0.34
SREBF1-206ENST00000423161 ZNF431Q8TF32 576 aaPredicted RBP12.92□□□□□ -0.34
SREBF1-206ENST00000423161 SAT2Q96F10 170 aaPredicted RBP12.92□□□□□ -0.34
SREBF1-206ENST00000423161 SEC22CQ9BRL7 303 aa12.92□□□□□ -0.34
SREBF1-206ENST00000423161 UQCC1Q9NVA1 299 aa12.92□□□□□ -0.34
SREBF1-206ENST00000423161 TRAV5A0A0B4J249 113 aa12.91□□□□□ -0.34
SREBF1-206ENST00000423161 FAM24AA6NFZ4 105 aa12.91□□□□□ -0.34
SREBF1-206ENST00000423161 J3KRW8 73 aa12.91□□□□□ -0.34
SREBF1-206ENST00000423161 OR1L4Q8NGR5 311 aa12.91□□□□□ -0.34
SREBF1-206ENST00000423161 C11orf1Q9H5F2 150 aa12.91□□□□□ -0.34
SREBF1-206ENST00000423161 NUDT15Q9NV35 164 aa12.91□□□□□ -0.34
SREBF1-206ENST00000423161 WDR83OSQ9Y284 106 aa12.91□□□□□ -0.34
SREBF1-206ENST00000423161 LINC00588Q9Y4M8 146 aa12.91□□□□□ -0.34
SREBF1-206ENST00000423161 PVALBP20472 110 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-206ENST00000423161 TNP2Q05952 138 aa12.9□□□□□ -0.34
SREBF1-206ENST00000423161 GUK1Q16774 197 aa12.9□□□□□ -0.34
SREBF1-206ENST00000423161 C6orf223Q8N319 242 aa12.9□□□□□ -0.34
SREBF1-206ENST00000423161 C12orf45Q8N5I9 185 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-206ENST00000423161 C2orf50Q96LR7 162 aa12.9□□□□□ -0.34
SREBF1-206ENST00000423161 PFDN5Q99471 154 aa12.9□□□□□ -0.34
SREBF1-206ENST00000423161 UBE2L5PA0A1B0GUS4 154 aa12.89□□□□□ -0.35
SREBF1-206ENST00000423161 SNURFLB1AK76 121 aa12.89□□□□□ -0.35
SREBF1-206ENST00000423161 NPIPB6E9PJ23 425 aa12.89□□□□□ -0.35
SREBF1-206ENST00000423161 LEPP41159 167 aa12.89□□□□□ -0.35
SREBF1-206ENST00000423161 S100A10P60903 97 aa12.89□□□□□ -0.35
SREBF1-206ENST00000423161 BAXQ07812 192 aa12.89□□□□□ -0.35
SREBF1-206ENST00000423161 OR5I1Q13606 314 aa12.89□□□□□ -0.35
SREBF1-206ENST00000423161 VWC2Q2TAL6 325 aa12.89□□□□□ -0.35
SREBF1-206ENST00000423161 LINC00612Q8N6U2 182 aa12.89□□□□□ -0.35
SREBF1-206ENST00000423161 GNPNAT1Q96EK6 184 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-206ENST00000423161 ODF3Q96PU9 254 aa12.89□□□□□ -0.35
SREBF1-206ENST00000423161 TRAV12-3A0A0B4J271 114 aa12.88□□□□□ -0.35
SREBF1-206ENST00000423161 GAGE12BA1L429 117 aa12.88□□□□□ -0.35
SREBF1-206ENST00000423161 GAGE7O76087 117 aa12.88□□□□□ -0.35
SREBF1-206ENST00000423161 RLN2P04090 185 aa12.88□□□□□ -0.35
SREBF1-206ENST00000423161 GAGE12FP0CL80 117 aa12.88□□□□□ -0.35
SREBF1-206ENST00000423161 GAGE12GP0CL81 117 aa12.88□□□□□ -0.35
SREBF1-206ENST00000423161 GAGE12IP0CL82 117 aa12.88□□□□□ -0.35
SREBF1-206ENST00000423161 CT45A10P0DMU9 189 aa12.88□□□□□ -0.35
SREBF1-206ENST00000423161 RPL29P47914 159 aaKnown RBP12.88□□□□□ -0.35
SREBF1-206ENST00000423161 SULT1A1P50225 295 aa12.88□□□□□ -0.35
SREBF1-206ENST00000423161 SSX7Q7RTT5 188 aa12.88□□□□□ -0.35
SREBF1-206ENST00000423161 LYRM2Q9NU23 88 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-206ENST00000423161 SLC39A9Q9NUM3 307 aa12.88□□□□□ -0.35
SREBF1-206ENST00000423161 ZNF586Q9NXT0 402 aa12.88□□□□□ -0.35
SREBF1-206ENST00000423161 TRAV26-1A0A087WT03 109 aa12.87□□□□□ -0.35
SREBF1-206ENST00000423161 IGSF23A1L1A6 192 aa12.87□□□□□ -0.35
SREBF1-206ENST00000423161 ZNF253O75346 499 aa12.87□□□□□ -0.35
SREBF1-206ENST00000423161 M6PRP20645 277 aa12.87□□□□□ -0.35
SREBF1-206ENST00000423161 S100A11P31949 105 aa12.87□□□□□ -0.35
SREBF1-206ENST00000423161 A0A0J9YY99 117 aa12.86□□□□□ -0.35
SREBF1-206ENST00000423161 H2AFB2P0C5Z0 115 aa12.86□□□□□ -0.35
SREBF1-206ENST00000423161 FGF7P21781 194 aa12.86□□□□□ -0.35
SREBF1-206ENST00000423161 HBG1P69891 147 aa12.86□□□□□ -0.35
SREBF1-206ENST00000423161 HBG2P69892 147 aa12.86□□□□□ -0.35
SREBF1-206ENST00000423161 RAB32Q13637 225 aa12.86□□□□□ -0.35
SREBF1-206ENST00000423161 STX12Q86Y82 276 aa12.86□□□□□ -0.35
SREBF1-206ENST00000423161 TMEM252Q8N6L7 170 aa12.86□□□□□ -0.35
SREBF1-206ENST00000423161 RXFP4Q8TDU9 374 aa12.86□□□□□ -0.35
SREBF1-206ENST00000423161 MRPL53Q96EL3 112 aaKnown RBP12.86□□□□□ -0.35
SREBF1-206ENST00000423161 PYGO2Q9BRQ0 406 aa12.86□□□□□ -0.35
SREBF1-206ENST00000423161 TRBV19A0A075B6N1 114 aa12.85□□□□□ -0.35
SREBF1-206ENST00000423161 M0R3E3 92 aa12.85□□□□□ -0.35
SREBF1-206ENST00000423161 HOXA5P20719 270 aa12.85□□□□□ -0.35
SREBF1-206ENST00000423161 ZNF503Q96F45 646 aa12.85□□□□□ -0.35
SREBF1-206ENST00000423161 C16orf90A8MZG2 172 aa12.84□□□□□ -0.35
SREBF1-206ENST00000423161 SLC25A5P05141 298 aaKnown RBP12.84□□□□□ -0.35
SREBF1-206ENST00000423161 IL15RAQ13261 267 aa12.84□□□□□ -0.35
SREBF1-206ENST00000423161 CHAC2Q8WUX2 184 aa12.84□□□□□ -0.35
SREBF1-206ENST00000423161 CCDC32Q9BV29 185 aa12.84□□□□□ -0.35
SREBF1-206ENST00000423161 Q9H8V8 135 aa12.84□□□□□ -0.35
SREBF1-206ENST00000423161 GPN1Q9HCN4 374 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-206ENST00000423161 TMEM14CQ9P0S9 112 aa12.84□□□□□ -0.35
SREBF1-206ENST00000423161 C7orf71A4D174 169 aa12.83□□□□□ -0.36
SREBF1-206ENST00000423161 HIST1H1EP10412 219 aaKnown RBP12.83□□□□□ -0.36
SREBF1-206ENST00000423161 DAZ2Q13117 558 aaKnown RBP12.83□□□□□ -0.36
SREBF1-206ENST00000423161 ERCC8Q13216 396 aa12.83□□□□□ -0.36
SREBF1-206ENST00000423161 ATP6V1FQ16864 119 aa12.83□□□□□ -0.36
SREBF1-206ENST00000423161 Q6ZTI0 123 aa12.83□□□□□ -0.36
SREBF1-206ENST00000423161 TMPRSS5Q9H3S3 457 aa12.83□□□□□ -0.36
SREBF1-206ENST00000423161 NDUFA13Q9P0J0 144 aa12.83□□□□□ -0.36
SREBF1-206ENST00000423161 PRELID1Q9Y255 219 aa12.83□□□□□ -0.36
SREBF1-206ENST00000423161 TIMM9Q9Y5J7 89 aa12.83□□□□□ -0.36
SREBF1-206ENST00000423161 FAM240BA0A1B0GVZ2 78 aa12.82□□□□□ -0.36
SREBF1-206ENST00000423161 NDUFB4O95168 129 aa12.82□□□□□ -0.36
SREBF1-206ENST00000423161 PYYP10082 97 aa12.82□□□□□ -0.36
SREBF1-206ENST00000423161 PDE6HQ13956 83 aa12.82□□□□□ -0.36
SREBF1-206ENST00000423161 TTC32Q5I0X7 151 aa12.82□□□□□ -0.36
SREBF1-206ENST00000423161 BLNKQ8WV28 456 aa12.82□□□□□ -0.36
SREBF1-206ENST00000423161 RYR1P21817 5038 aa12.82□□□□□ -0.36
SREBF1-206ENST00000423161 H3BNG1 76 aa12.81□□□□□ -0.36
SREBF1-206ENST00000423161 MPDU1O75352 247 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms