RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 SLC17A3O00476 420 aa6.58□□□□□ -1.36
NUP50-206ENST00000422489 TSPOP30536 169 aa6.58□□□□□ -1.36
NUP50-206ENST00000422489 RPL29P47914 159 aaKnown RBP6.58□□□□□ -1.36
NUP50-206ENST00000422489 TAS2R60P59551 318 aa6.58□□□□□ -1.36
NUP50-206ENST00000422489 NHLH2Q02577 135 aa6.58□□□□□ -1.36
NUP50-206ENST00000422489 IL15RAQ13261 267 aa6.58□□□□□ -1.36
NUP50-206ENST00000422489 CCDC28AQ8IWP9 274 aa6.58□□□□□ -1.36
NUP50-206ENST00000422489 TMEM256Q8N2U0 113 aa6.58□□□□□ -1.36
NUP50-206ENST00000422489 PFDN5Q99471 154 aa6.58□□□□□ -1.36
NUP50-206ENST00000422489 SLC39A9Q9NUM3 307 aa6.58□□□□□ -1.36
NUP50-206ENST00000422489 TIMM9Q9Y5J7 89 aa6.58□□□□□ -1.36
NUP50-206ENST00000422489 PXMP4Q9Y6I8 212 aa6.58□□□□□ -1.36
NUP50-206ENST00000422489 IGLC2P0DOY2 106 aa6.57□□□□□ -1.36
NUP50-206ENST00000422489 KIR3DS1Q14943 382 aa6.57□□□□□ -1.36
NUP50-206ENST00000422489 GUK1Q16774 197 aa6.57□□□□□ -1.36
NUP50-206ENST00000422489 VWC2Q2TAL6 325 aa6.57□□□□□ -1.36
NUP50-206ENST00000422489 LRRC37A5PQ49AS3 106 aa6.57□□□□□ -1.36
NUP50-206ENST00000422489 C4orf48Q5BLP8 95 aa6.57□□□□□ -1.36
NUP50-206ENST00000422489 LINC00299Q6ZSB3 139 aa6.57□□□□□ -1.36
NUP50-206ENST00000422489 SAT2Q96F10 170 aaPredicted RBP6.57□□□□□ -1.36
NUP50-206ENST00000422489 ATG101Q9BSB4 218 aa6.57□□□□□ -1.36
NUP50-206ENST00000422489 SLC25A31Q9H0C2 315 aa6.57□□□□□ -1.36
NUP50-206ENST00000422489 NOP10Q9NPE3 64 aaKnown RBP6.57□□□□□ -1.36
NUP50-206ENST00000422489 ZNF586Q9NXT0 402 aa6.57□□□□□ -1.36
NUP50-206ENST00000422489 TRAV12-3A0A0B4J271 114 aa6.56□□□□□ -1.36
NUP50-206ENST00000422489 CBY3A6NI87 242 aa6.56□□□□□ -1.36
NUP50-206ENST00000422489 INMT-MINDY4F8WBC2 141 aa6.56□□□□□ -1.36
NUP50-206ENST00000422489 H7BYZ3 331 aa6.56□□□□□ -1.36
NUP50-206ENST00000422489 UPK1BO75841 260 aa6.56□□□□□ -1.36
NUP50-206ENST00000422489 NUDT3O95989 172 aa6.56□□□□□ -1.36
NUP50-206ENST00000422489 ATP5G1P05496 136 aa6.56□□□□□ -1.36
NUP50-206ENST00000422489 CT45A10P0DMU9 189 aa6.56□□□□□ -1.36
NUP50-206ENST00000422489 LEPP41159 167 aa6.56□□□□□ -1.36
NUP50-206ENST00000422489 ATP5G3P48201 142 aa6.56□□□□□ -1.36
NUP50-206ENST00000422489 ERCC8Q13216 396 aa6.56□□□□□ -1.36
NUP50-206ENST00000422489 THAP6Q8TBB0 222 aa6.56□□□□□ -1.36
NUP50-206ENST00000422489 BLNKQ8WV28 456 aa6.56□□□□□ -1.36
NUP50-206ENST00000422489 C16orf74Q96GX8 76 aa6.56□□□□□ -1.36
NUP50-206ENST00000422489 TIMM8BQ9Y5J9 83 aaPredicted RBP6.56□□□□□ -1.36
NUP50-206ENST00000422489 TRBV19A0A075B6N1 114 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 PLAC8L1A1L4L8 177 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 A6NHS1 94 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 E5RGE8 158 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 SSNA1O43805 119 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 MPDU1O75352 247 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 PYYP10082 97 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 IFITM3Q01628 133 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 OR5I1Q13606 314 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 CLINT1Q14677 625 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 LGALS9BQ3B8N2 356 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 RNF212Q495C1 297 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 GCSAMLQ5JQS6 135 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 GFI1BQ5VTD9 330 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 ZNF493Q6ZR52 646 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 LINC00336Q6ZUF6 198 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 OR5C1Q8NGR4 320 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 CHAC2Q8WUX2 184 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 OR5AC2Q9NZP5 309 aa6.55□□□□□ -1.36
NUP50-206ENST00000422489 GAGE12BA1L429 117 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 PRSS29PA6NIE9 313 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 NPIPB6E9PJ23 425 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 M0R3E3 92 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 PRAF2O60831 178 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 GAGE7O76087 117 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 GAGE12FP0CL80 117 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 GAGE12GP0CL81 117 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 GAGE12IP0CL82 117 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 HIST1H1EP10412 219 aaKnown RBP6.54□□□□□ -1.36
NUP50-206ENST00000422489 LORP23490 312 aaPredicted RBP6.54□□□□□ -1.36
NUP50-206ENST00000422489 CYCSP99999 105 aaKnown RBP6.54□□□□□ -1.36
NUP50-206ENST00000422489 MIR17HGQ75NE6 70 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 EXOC3-AS1Q8N2X6 119 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 C15orf53Q8NAA6 179 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 C20orf144Q9BQM9 153 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 NPCDR1Q9BY65 106 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 NMES1Q9C002 83 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 TMEM14CQ9P0S9 112 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 PRELID1Q9Y255 219 aa6.54□□□□□ -1.36
NUP50-206ENST00000422489 SNURFLB1AK76 121 aa6.53□□□□□ -1.36
NUP50-206ENST00000422489 H0YIZ8 118 aa6.53□□□□□ -1.36
NUP50-206ENST00000422489 RTL8CO15255 209 aa6.53□□□□□ -1.36
NUP50-206ENST00000422489 ZNF253O75346 499 aa6.53□□□□□ -1.36
NUP50-206ENST00000422489 NDUFB4O95168 129 aa6.53□□□□□ -1.36
NUP50-206ENST00000422489 RNASE4P34096 147 aaKnown RBP6.53□□□□□ -1.36
NUP50-206ENST00000422489 DEFA1P59665 94 aa6.53□□□□□ -1.36
NUP50-206ENST00000422489 DEFA3P59666 94 aa6.53□□□□□ -1.36
NUP50-206ENST00000422489 ICAM4Q14773 271 aa6.53□□□□□ -1.36
NUP50-206ENST00000422489 FAM122CQ6P4D5 195 aa6.53□□□□□ -1.36
NUP50-206ENST00000422489 TMEM263Q8WUH6 116 aaKnown RBP6.53□□□□□ -1.36
NUP50-206ENST00000422489 LINC00477Q96M19 166 aa6.53□□□□□ -1.36
NUP50-206ENST00000422489 AGPAT4-IT1Q9H0P7 198 aa6.53□□□□□ -1.36
NUP50-206ENST00000422489 OR51M1Q9H341 326 aa6.53□□□□□ -1.36
NUP50-206ENST00000422489 AAMDCQ9H7C9 122 aa6.53□□□□□ -1.36
NUP50-206ENST00000422489 PTTG2Q9NZH5 202 aa6.53□□□□□ -1.36
NUP50-206ENST00000422489 C17orf112F2Z3M2 114 aa6.52□□□□□ -1.37
NUP50-206ENST00000422489 OR10J4P0C629 311 aa6.52□□□□□ -1.37
NUP50-206ENST00000422489 NBEAP1P0C6P0 100 aa6.52□□□□□ -1.37
NUP50-206ENST00000422489 CCL18P55774 89 aa6.52□□□□□ -1.37
NUP50-206ENST00000422489 SOHLH1Q5JUK2 328 aa6.52□□□□□ -1.37
NUP50-206ENST00000422489 SCGB1C1Q8TD33 95 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms