RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 TMEM155Q4W5P6 130 aa16.75■□□□□ 0.27
USP48-205ENST00000421625 JKAMPQ9P055 326 aa16.75■□□□□ 0.27
USP48-205ENST00000421625 NUP37Q8NFH4 326 aa16.74■□□□□ 0.27
USP48-205ENST00000421625 OR4X2Q8NGF9 303 aa16.74■□□□□ 0.27
USP48-205ENST00000421625 CT45A10P0DMU9 189 aa16.74■□□□□ 0.27
USP48-205ENST00000421625 BCL6BQ8N143 479 aaPredicted RBP16.74■□□□□ 0.27
USP48-205ENST00000421625 TNFRSF13BO14836 293 aaPredicted RBP16.74■□□□□ 0.27
USP48-205ENST00000421625 NPYP01303 97 aa16.74■□□□□ 0.27
USP48-205ENST00000421625 TMEM189A5PLL7 270 aa16.73■□□□□ 0.27
USP48-205ENST00000421625 SIVA1O15304 175 aa16.73■□□□□ 0.27
USP48-205ENST00000421625 NPFFR1Q9GZQ6 430 aa16.73■□□□□ 0.27
USP48-205ENST00000421625 SH2D1AO60880 128 aa16.72■□□□□ 0.27
USP48-205ENST00000421625 NDUFS7O75251 213 aa16.72■□□□□ 0.27
USP48-205ENST00000421625 S4R3C0 116 aa16.72■□□□□ 0.27
USP48-205ENST00000421625 ADGRG4Q8IZF6 3080 aa16.72■□□□□ 0.27
USP48-205ENST00000421625 MRPS12O15235 138 aaKnown RBP16.72■□□□□ 0.27
USP48-205ENST00000421625 C18orf15Q96N68 181 aa16.72■□□□□ 0.27
USP48-205ENST00000421625 TACC2O95359 2948 aa16.72■□□□□ 0.27
USP48-205ENST00000421625 FCGR2BP31994 310 aaPredicted RBP16.71■□□□□ 0.27
USP48-205ENST00000421625 TTTY13Q9BZ97 58 aa16.71■□□□□ 0.27
USP48-205ENST00000421625 IGHV1-3A0A0C4DH29 117 aa16.71■□□□□ 0.27
USP48-205ENST00000421625 IL4P05112 153 aa16.71■□□□□ 0.27
USP48-205ENST00000421625 ZNF491Q8N8L2 437 aa16.71■□□□□ 0.27
USP48-205ENST00000421625 K7EIM0 57 aa16.7■□□□□ 0.26
USP48-205ENST00000421625 CKS2P33552 79 aa16.7■□□□□ 0.26
USP48-205ENST00000421625 TMEM108Q6UXF1 575 aa16.7■□□□□ 0.26
USP48-205ENST00000421625 COL25A1Q9BXS0 654 aaPredicted RBP16.7■□□□□ 0.26
USP48-205ENST00000421625 K7EM74 188 aa16.7■□□□□ 0.26
USP48-205ENST00000421625 LYPD1Q8N2G4 141 aa16.7■□□□□ 0.26
USP48-205ENST00000421625 OR5A1Q8NGJ0 315 aa16.7■□□□□ 0.26
USP48-205ENST00000421625 RNF125Q96EQ8 232 aa16.7■□□□□ 0.26
USP48-205ENST00000421625 IGKV2D-26A0A0A0MRZ7 120 aa16.69■□□□□ 0.26
USP48-205ENST00000421625 WI2-2373I1.2A0A1W2PRP0 233 aa16.69■□□□□ 0.26
USP48-205ENST00000421625 SVIPQ8NHG7 77 aa16.69■□□□□ 0.26
USP48-205ENST00000421625 FXYD2P54710 66 aa16.69■□□□□ 0.26
USP48-205ENST00000421625 PLGLAQ15195 96 aa16.69■□□□□ 0.26
USP48-205ENST00000421625 IGKV2-40A0A087WW87 121 aaPredicted RBP16.68■□□□□ 0.26
USP48-205ENST00000421625 IGKV2D-40P01614 121 aaPredicted RBP16.68■□□□□ 0.26
USP48-205ENST00000421625 FABP2P12104 132 aa16.68■□□□□ 0.26
USP48-205ENST00000421625 GCSHP23434 173 aa16.68■□□□□ 0.26
USP48-205ENST00000421625 SAMD5Q5TGI4 173 aa16.68■□□□□ 0.26
USP48-205ENST00000421625 BSPH1Q075Z2 132 aa16.68■□□□□ 0.26
USP48-205ENST00000421625 TWIST1Q15672 202 aa16.68■□□□□ 0.26
USP48-205ENST00000421625 ASCL5Q7RTU5 278 aa16.67■□□□□ 0.26
USP48-205ENST00000421625 CSMD1Q96PZ7 3565 aa16.67■□□□□ 0.26
USP48-205ENST00000421625 K7ERJ3 54 aa16.67■□□□□ 0.26
USP48-205ENST00000421625 GAS8-AS1O95177 125 aa16.67■□□□□ 0.26
USP48-205ENST00000421625 IGLV1-47P01700 117 aa16.67■□□□□ 0.26
USP48-205ENST00000421625 NBL1P41271 181 aa16.67■□□□□ 0.26
USP48-205ENST00000421625 BSNQ9UPA5 3926 aa16.67■□□□□ 0.26
USP48-205ENST00000421625 EGR2P11161 476 aaPredicted RBP16.66■□□□□ 0.26
USP48-205ENST00000421625 CNIH1O95406 144 aa16.66■□□□□ 0.26
USP48-205ENST00000421625 SMIM13P0DJ93 91 aa16.66■□□□□ 0.26
USP48-205ENST00000421625 KLF17Q5JT82 389 aaPredicted RBP16.66■□□□□ 0.26
USP48-205ENST00000421625 BUB1B-PAK6H3BSN5 160 aa16.65■□□□□ 0.26
USP48-205ENST00000421625 COX7A1P24310 79 aa16.65■□□□□ 0.26
USP48-205ENST00000421625 RPL24P83731 157 aaKnown RBP16.65■□□□□ 0.26
USP48-205ENST00000421625 Q8TAT8 98 aa16.65■□□□□ 0.26
USP48-205ENST00000421625 AAMDCQ9H7C9 122 aa16.65■□□□□ 0.26
USP48-205ENST00000421625 MSRB1Q9NZV6 116 aa16.65■□□□□ 0.26
USP48-205ENST00000421625 ZNF80P51504 273 aaPredicted RBP16.65■□□□□ 0.26
USP48-205ENST00000421625 TEX48A0A1B0GUV7 120 aa16.64■□□□□ 0.25
USP48-205ENST00000421625 ZGRF1Q86YA3 2104 aa16.64■□□□□ 0.25
USP48-205ENST00000421625 K7EMI3 77 aa16.64■□□□□ 0.25
USP48-205ENST00000421625 IGFBPL1Q8WX77 278 aa16.63■□□□□ 0.25
USP48-205ENST00000421625 KAAG1Q9UBP8 84 aa16.63■□□□□ 0.25
USP48-205ENST00000421625 PCNX1Q96RV3 2341 aa16.63■□□□□ 0.25
USP48-205ENST00000421625 SPTBN4Q9H254 2564 aa16.63■□□□□ 0.25
USP48-205ENST00000421625 NPIPB5A8MRT5 1133 aa16.63■□□□□ 0.25
USP48-205ENST00000421625 HHLA3Q9XRX5 114 aa16.63■□□□□ 0.25
USP48-205ENST00000421625 CEACAM4O75871 244 aa16.62■□□□□ 0.25
USP48-205ENST00000421625 ODF1Q14990 250 aa16.62■□□□□ 0.25
USP48-205ENST00000421625 CHAC1Q9BUX1 264 aa16.62■□□□□ 0.25
USP48-205ENST00000421625 IGF2RP11717 2491 aa16.62■□□□□ 0.25
USP48-205ENST00000421625 LEPP41159 167 aa16.62■□□□□ 0.25
USP48-205ENST00000421625 IGFL4Q6B9Z1 124 aa16.62■□□□□ 0.25
USP48-205ENST00000421625 ZNF575Q86XF7 245 aa16.62■□□□□ 0.25
USP48-205ENST00000421625 RPEQ96AT9 228 aa16.62■□□□□ 0.25
USP48-205ENST00000421625 RNF185Q96GF1 192 aa16.62■□□□□ 0.25
USP48-205ENST00000421625 PRR25Q96S07 402 aa16.62■□□□□ 0.25
USP48-205ENST00000421625 TPRP12270 2363 aaKnown RBP16.62■□□□□ 0.25
USP48-205ENST00000421625 THBDP07204 575 aa16.61■□□□□ 0.25
USP48-205ENST00000421625 SMIM17P0DL12 118 aa16.61■□□□□ 0.25
USP48-205ENST00000421625 IGF2-ASQ6U949 168 aa16.61■□□□□ 0.25
USP48-205ENST00000421625 ZNF562Q6V9R5 426 aa16.61■□□□□ 0.25
USP48-205ENST00000421625 TMEM190Q8WZ59 177 aa16.61■□□□□ 0.25
USP48-205ENST00000421625 SPTA1P02549 2419 aa16.61■□□□□ 0.25
USP48-205ENST00000421625 TNFRSF14Q92956 283 aa16.61■□□□□ 0.25
USP48-205ENST00000421625 PPIAL4CA0A0B4J2A2 164 aa16.6■□□□□ 0.25
USP48-205ENST00000421625 GNG7O60262 68 aa16.6■□□□□ 0.25
USP48-205ENST00000421625 PPIAL4GP0DN37 164 aa16.6■□□□□ 0.25
USP48-205ENST00000421625 EVI2AP22794 236 aa16.6■□□□□ 0.25
USP48-205ENST00000421625 RNASE6Q93091 150 aaKnown RBP16.6■□□□□ 0.25
USP48-205ENST00000421625 FBLL1A6NHQ2 334 aaKnown RBP16.6■□□□□ 0.25
USP48-205ENST00000421625 C16orf97H3BN30 126 aa16.6■□□□□ 0.25
USP48-205ENST00000421625 CEACAM3P40198 252 aa16.6■□□□□ 0.25
USP48-205ENST00000421625 PDE6HQ13956 83 aa16.6■□□□□ 0.25
USP48-205ENST00000421625 VGLL1Q99990 258 aa16.6■□□□□ 0.25
USP48-205ENST00000421625 MAP1LC3AQ9H492 121 aa16.6■□□□□ 0.25
USP48-205ENST00000421625 IGLC6P0CF74 106 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms