RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 IGLC2P0DOY2 106 aa15.08■□□□□ 0
PTPN4-202ENST00000420482 MIC13Q5XKP0 118 aa15.08■□□□□ 0
PTPN4-202ENST00000420482 TMEM263Q8WUH6 116 aaKnown RBP15.08■□□□□ 0
PTPN4-202ENST00000420482 PRSS29PA6NIE9 313 aa15.07■□□□□ 0
PTPN4-202ENST00000420482 F5H768 121 aa15.07■□□□□ 0
PTPN4-202ENST00000420482 MPDU1O75352 247 aa15.07■□□□□ 0
PTPN4-202ENST00000420482 AZU1P20160 251 aa15.07■□□□□ 0
PTPN4-202ENST00000420482 RAB32Q13637 225 aa15.07■□□□□ 0
PTPN4-202ENST00000420482 TMEM252Q8N6L7 170 aa15.07■□□□□ 0
PTPN4-202ENST00000420482 C11orf1Q9H5F2 150 aa15.07■□□□□ 0
PTPN4-202ENST00000420482 SLC39A9Q9NUM3 307 aa15.07■□□□□ 0
PTPN4-202ENST00000420482 IGLV2-18A0A075B6J9 118 aa15.06■□□□□ 0
PTPN4-202ENST00000420482 H3BTX0 84 aa15.06■□□□□ 0
PTPN4-202ENST00000420482 SLC17A3O00476 420 aa15.06■□□□□ 0
PTPN4-202ENST00000420482 ZNF253O75346 499 aa15.06■□□□□ 0
PTPN4-202ENST00000420482 RLN2P04090 185 aa15.06■□□□□ 0
PTPN4-202ENST00000420482 MORN5Q5VZ52 161 aa15.06■□□□□ 0
PTPN4-202ENST00000420482 ENKURQ8TC29 256 aa15.06■□□□□ 0
PTPN4-202ENST00000420482 CHAC2Q8WUX2 184 aa15.06■□□□□ 0
PTPN4-202ENST00000420482 FAT2Q9NYQ8 4349 aa15.06■□□□□ 0
PTPN4-202ENST00000420482 DNAH17Q9UFH2 4485 aa15.05■□□□□ 0
PTPN4-202ENST00000420482 PLAC8L1A1L4L8 177 aa15.05■□□□□ -0
PTPN4-202ENST00000420482 FGF7P21781 194 aa15.05■□□□□ -0
PTPN4-202ENST00000420482 LEPP41159 167 aa15.05■□□□□ -0
PTPN4-202ENST00000420482 ASAH1Q13510 395 aa15.05■□□□□ -0
PTPN4-202ENST00000420482 SAT2Q96F10 170 aaPredicted RBP15.05■□□□□ -0
PTPN4-202ENST00000420482 IGSF23A1L1A6 192 aa15.04■□□□□ -0
PTPN4-202ENST00000420482 H3BQ15 152 aa15.04■□□□□ -0
PTPN4-202ENST00000420482 IL15RAQ13261 267 aa15.04■□□□□ -0
PTPN4-202ENST00000420482 RNASE8Q8TDE3 154 aaKnown RBP15.04■□□□□ -0
PTPN4-202ENST00000420482 ODF3Q96PU9 254 aa15.04■□□□□ -0
PTPN4-202ENST00000420482 FCN2Q15485 313 aa15.03■□□□□ -0
PTPN4-202ENST00000420482 MRPL53Q96EL3 112 aaKnown RBP15.03■□□□□ -0
PTPN4-202ENST00000420482 SLC25A31Q9H0C2 315 aa15.03■□□□□ -0
PTPN4-202ENST00000420482 NOP10Q9NPE3 64 aaKnown RBP15.03■□□□□ -0
PTPN4-202ENST00000420482 TIMM9Q9Y5J7 89 aa15.03■□□□□ -0
PTPN4-202ENST00000420482 TRAV5A0A0B4J249 113 aa15.02■□□□□ -0
PTPN4-202ENST00000420482 SNURFLB1AK76 121 aa15.02■□□□□ -0
PTPN4-202ENST00000420482 NUDT3O95989 172 aa15.02■□□□□ -0
PTPN4-202ENST00000420482 PRB4P10163 310 aaPredicted RBP15.02■□□□□ -0
PTPN4-202ENST00000420482 CCL18P55774 89 aa15.02■□□□□ -0
PTPN4-202ENST00000420482 PDE6HQ13956 83 aa15.02■□□□□ -0
PTPN4-202ENST00000420482 GFI1BQ5VTD9 330 aa15.02■□□□□ -0
PTPN4-202ENST00000420482 TMEM14CQ9P0S9 112 aa15.02■□□□□ -0
PTPN4-202ENST00000420482 PRELID1Q9Y255 219 aa15.02■□□□□ -0
PTPN4-202ENST00000420482 PKHD1P08F94 4074 aa15.02□□□□□ -0.01
PTPN4-202ENST00000420482 DNAH2Q9P225 4427 aa15.02□□□□□ -0.01
PTPN4-202ENST00000420482 PRAC2D3DTV9 90 aa15.01□□□□□ -0.01
PTPN4-202ENST00000420482 NPIPB6E9PJ23 425 aa15.01□□□□□ -0.01
PTPN4-202ENST00000420482 RTL8CO15255 209 aa15.01□□□□□ -0.01
PTPN4-202ENST00000420482 CYCSP99999 105 aaKnown RBP15.01□□□□□ -0.01
PTPN4-202ENST00000420482 Q6ZR54 194 aa15.01□□□□□ -0.01
PTPN4-202ENST00000420482 KCNIP2Q9NS61 270 aa15.01□□□□□ -0.01
PTPN4-202ENST00000420482 ZNF586Q9NXT0 402 aa15.01□□□□□ -0.01
PTPN4-202ENST00000420482 TRBV19A0A075B6N1 114 aa15□□□□□ -0.01
PTPN4-202ENST00000420482 E5RGE8 158 aa15□□□□□ -0.01
PTPN4-202ENST00000420482 PRAF2O60831 178 aa15□□□□□ -0.01
PTPN4-202ENST00000420482 HIST1H1EP10412 219 aaKnown RBP15□□□□□ -0.01
PTPN4-202ENST00000420482 C1orf134Q5TEV5 83 aa15□□□□□ -0.01
PTPN4-202ENST00000420482 PYGO2Q9BRQ0 406 aa15□□□□□ -0.01
PTPN4-202ENST00000420482 NPCDR1Q9BY65 106 aa15□□□□□ -0.01
PTPN4-202ENST00000420482 AAMDCQ9H7C9 122 aa15□□□□□ -0.01
PTPN4-202ENST00000420482 J3KRW8 73 aa14.99□□□□□ -0.01
PTPN4-202ENST00000420482 CLINT1Q14677 625 aa14.99□□□□□ -0.01
PTPN4-202ENST00000420482 PARD6GQ9BYG4 376 aaPredicted RBP14.99□□□□□ -0.01
PTPN4-202ENST00000420482 NMES1Q9C002 83 aa14.99□□□□□ -0.01
PTPN4-202ENST00000420482 TRAV12-3A0A0B4J271 114 aa14.98□□□□□ -0.01
PTPN4-202ENST00000420482 A0A1B0GVY2 172 aa14.98□□□□□ -0.01
PTPN4-202ENST00000420482 UPK1BO75841 260 aa14.98□□□□□ -0.01
PTPN4-202ENST00000420482 SLC25A5P05141 298 aaKnown RBP14.98□□□□□ -0.01
PTPN4-202ENST00000420482 CT45A10P0DMU9 189 aa14.98□□□□□ -0.01
PTPN4-202ENST00000420482 KIR3DS1Q14943 382 aa14.98□□□□□ -0.01
PTPN4-202ENST00000420482 OR5C1Q8NGR4 320 aa14.98□□□□□ -0.01
PTPN4-202ENST00000420482 LINC00477Q96M19 166 aa14.98□□□□□ -0.01
PTPN4-202ENST00000420482 MUC4Q99102 2169 aa14.98□□□□□ -0.01
PTPN4-202ENST00000420482 C17orf112F2Z3M2 114 aa14.96□□□□□ -0.01
PTPN4-202ENST00000420482 NHLH2Q02577 135 aa14.96□□□□□ -0.01
PTPN4-202ENST00000420482 OR5I1Q13606 314 aa14.96□□□□□ -0.01
PTPN4-202ENST00000420482 BLNKQ8WV28 456 aa14.96□□□□□ -0.01
PTPN4-202ENST00000420482 GNPNAT1Q96EK6 184 aaPredicted RBP14.96□□□□□ -0.01
PTPN4-202ENST00000420482 LRRC37A5PQ49AS3 106 aa14.95□□□□□ -0.02
PTPN4-202ENST00000420482 ZNF680Q8NEM1 530 aa14.95□□□□□ -0.02
PTPN4-202ENST00000420482 THAP6Q8TBB0 222 aa14.95□□□□□ -0.02
PTPN4-202ENST00000420482 RNF141Q8WVD5 230 aa14.95□□□□□ -0.02
PTPN4-202ENST00000420482 GAGE12BA1L429 117 aa14.94□□□□□ -0.02
PTPN4-202ENST00000420482 C7orf71A4D174 169 aa14.94□□□□□ -0.02
PTPN4-202ENST00000420482 M0R3E3 92 aa14.94□□□□□ -0.02
PTPN4-202ENST00000420482 GAGE7O76087 117 aa14.94□□□□□ -0.02
PTPN4-202ENST00000420482 SIX6O95475 246 aa14.94□□□□□ -0.02
PTPN4-202ENST00000420482 GAGE12FP0CL80 117 aa14.94□□□□□ -0.02
PTPN4-202ENST00000420482 GAGE12GP0CL81 117 aa14.94□□□□□ -0.02
PTPN4-202ENST00000420482 GAGE12IP0CL82 117 aa14.94□□□□□ -0.02
PTPN4-202ENST00000420482 PET100P0DJ07 73 aa14.94□□□□□ -0.02
PTPN4-202ENST00000420482 PYYP10082 97 aa14.94□□□□□ -0.02
PTPN4-202ENST00000420482 M6PRP20645 277 aa14.94□□□□□ -0.02
PTPN4-202ENST00000420482 TMEM78Q5T7P6 136 aa14.94□□□□□ -0.02
PTPN4-202ENST00000420482 LINC00612Q8N6U2 182 aa14.94□□□□□ -0.02
PTPN4-202ENST00000420482 ZNF503Q96F45 646 aa14.94□□□□□ -0.02
PTPN4-202ENST00000420482 MRPL32Q9BYC8 188 aaKnown RBP14.94□□□□□ -0.02
PTPN4-202ENST00000420482 RYR1P21817 5038 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms