RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 PRM2P04554 102 aa11.14□□□□□ -0.63
ITGB1-204ENST00000417122 CDKN1BP46527 198 aa11.14□□□□□ -0.63
ITGB1-204ENST00000417122 GCSAMLQ5JQS6 135 aa11.14□□□□□ -0.63
ITGB1-204ENST00000417122 OR10J6PQ8NGY7 276 aa11.14□□□□□ -0.63
ITGB1-204ENST00000417122 WDR61Q9GZS3 305 aaKnown RBP11.14□□□□□ -0.63
ITGB1-204ENST00000417122 TMEM14CQ9P0S9 112 aa11.14□□□□□ -0.63
ITGB1-204ENST00000417122 TRBV19A0A075B6N1 114 aa11.13□□□□□ -0.63
ITGB1-204ENST00000417122 ZNF253O75346 499 aa11.13□□□□□ -0.63
ITGB1-204ENST00000417122 MPC2O95563 127 aa11.13□□□□□ -0.63
ITGB1-204ENST00000417122 PET100P0DJ07 73 aa11.13□□□□□ -0.63
ITGB1-204ENST00000417122 OXA1LQ15070 435 aa11.13□□□□□ -0.63
ITGB1-204ENST00000417122 TMEM256Q8N2U0 113 aa11.13□□□□□ -0.63
ITGB1-204ENST00000417122 LINC01587Q99440 93 aa11.13□□□□□ -0.63
ITGB1-204ENST00000417122 NDUFAF3Q9BU61 184 aa11.13□□□□□ -0.63
ITGB1-204ENST00000417122 HIST1H1EP10412 219 aaKnown RBP11.12□□□□□ -0.63
ITGB1-204ENST00000417122 TSPOP30536 169 aa11.12□□□□□ -0.63
ITGB1-204ENST00000417122 DAD1P61803 113 aa11.12□□□□□ -0.63
ITGB1-204ENST00000417122 KCNIP2Q9NS61 270 aa11.12□□□□□ -0.63
ITGB1-204ENST00000417122 C17orf112F2Z3M2 114 aa11.11□□□□□ -0.63
ITGB1-204ENST00000417122 PYYP10082 97 aa11.11□□□□□ -0.63
ITGB1-204ENST00000417122 AZU1P20160 251 aa11.11□□□□□ -0.63
ITGB1-204ENST00000417122 TAS2R60P59551 318 aa11.11□□□□□ -0.63
ITGB1-204ENST00000417122 ATP5SQ99766 215 aa11.11□□□□□ -0.63
ITGB1-204ENST00000417122 SLC25A2Q9BXI2 301 aa11.11□□□□□ -0.63
ITGB1-204ENST00000417122 PARD6GQ9BYG4 376 aaPredicted RBP11.11□□□□□ -0.63
ITGB1-204ENST00000417122 HSPB11Q9Y547 144 aa11.11□□□□□ -0.63
ITGB1-204ENST00000417122 TIMM9Q9Y5J7 89 aa11.11□□□□□ -0.63
ITGB1-204ENST00000417122 LYRM9A8MSI8 78 aa11.1□□□□□ -0.63
ITGB1-204ENST00000417122 NDUFB4O95168 129 aa11.1□□□□□ -0.63
ITGB1-204ENST00000417122 HTN1P15515 57 aa11.1□□□□□ -0.63
ITGB1-204ENST00000417122 HTN3P15516 51 aa11.1□□□□□ -0.63
ITGB1-204ENST00000417122 RPL12P30050 165 aaKnown RBP11.1□□□□□ -0.63
ITGB1-204ENST00000417122 PDE6HQ13956 83 aa11.1□□□□□ -0.63
ITGB1-204ENST00000417122 KIR3DS1Q14943 382 aa11.1□□□□□ -0.63
ITGB1-204ENST00000417122 MIR17HGQ75NE6 70 aa11.1□□□□□ -0.63
ITGB1-204ENST00000417122 BLNKQ8WV28 456 aa11.1□□□□□ -0.63
ITGB1-204ENST00000417122 MRPL53Q96EL3 112 aaKnown RBP11.1□□□□□ -0.63
ITGB1-204ENST00000417122 FAM210BQ96KR6 192 aa11.1□□□□□ -0.63
ITGB1-204ENST00000417122 C20orf144Q9BQM9 153 aa11.1□□□□□ -0.63
ITGB1-204ENST00000417122 MBD2Q9UBB5 411 aa11.1□□□□□ -0.63
ITGB1-204ENST00000417122 PLAC8L1A1L4L8 177 aa11.09□□□□□ -0.63
ITGB1-204ENST00000417122 NPIPB6E9PJ23 425 aa11.09□□□□□ -0.63
ITGB1-204ENST00000417122 M0R3E3 92 aa11.09□□□□□ -0.63
ITGB1-204ENST00000417122 CT45A10P0DMU9 189 aa11.09□□□□□ -0.63
ITGB1-204ENST00000417122 FAM167A-AS1Q96KT0 104 aa11.09□□□□□ -0.63
ITGB1-204ENST00000417122 ODF3Q96PU9 254 aa11.09□□□□□ -0.63
ITGB1-204ENST00000417122 MRPL32Q9BYC8 188 aaKnown RBP11.09□□□□□ -0.63
ITGB1-204ENST00000417122 SMIM3Q9BZL3 60 aa11.09□□□□□ -0.63
ITGB1-204ENST00000417122 PRELID1Q9Y255 219 aa11.09□□□□□ -0.63
ITGB1-204ENST00000417122 ALG5Q9Y673 324 aa11.09□□□□□ -0.63
ITGB1-204ENST00000417122 H7BYZ3 331 aa11.08□□□□□ -0.64
ITGB1-204ENST00000417122 PTTG1O95997 202 aa11.08□□□□□ -0.64
ITGB1-204ENST00000417122 IFNA5P01569 189 aa11.08□□□□□ -0.64
ITGB1-204ENST00000417122 P0DMU3 169 aa11.08□□□□□ -0.64
ITGB1-204ENST00000417122 FAM231AP0DMU4 169 aa11.08□□□□□ -0.64
ITGB1-204ENST00000417122 FAM231CP0DMU5 169 aa11.08□□□□□ -0.64
ITGB1-204ENST00000417122 LEPP41159 167 aa11.08□□□□□ -0.64
ITGB1-204ENST00000417122 GFI1BQ5VTD9 330 aa11.08□□□□□ -0.64
ITGB1-204ENST00000417122 EXOC3-AS1Q8N2X6 119 aa11.08□□□□□ -0.64
ITGB1-204ENST00000417122 SCGB1C1Q8TD33 95 aa11.08□□□□□ -0.64
ITGB1-204ENST00000417122 C16orf74Q96GX8 76 aa11.08□□□□□ -0.64
ITGB1-204ENST00000417122 OR51M1Q9H341 326 aa11.08□□□□□ -0.64
ITGB1-204ENST00000417122 AAMDCQ9H7C9 122 aa11.08□□□□□ -0.64
ITGB1-204ENST00000417122 BIRC6Q9NR09 4857 aa11.08□□□□□ -0.64
ITGB1-204ENST00000417122 VPS13DQ5THJ4 4388 aa11.07□□□□□ -0.64
ITGB1-204ENST00000417122 J3KRW8 73 aa11.07□□□□□ -0.64
ITGB1-204ENST00000417122 NBEAP1P0C6P0 100 aa11.07□□□□□ -0.64
ITGB1-204ENST00000417122 DEFB130BP0DP73 79 aa11.07□□□□□ -0.64
ITGB1-204ENST00000417122 DEFB130AP0DP74 79 aa11.07□□□□□ -0.64
ITGB1-204ENST00000417122 FCN2Q15485 313 aa11.07□□□□□ -0.64
ITGB1-204ENST00000417122 ZNF493Q6ZR52 646 aa11.07□□□□□ -0.64
ITGB1-204ENST00000417122 FUT9Q9Y231 359 aa11.07□□□□□ -0.64
ITGB1-204ENST00000417122 ERCC8Q13216 396 aa11.06□□□□□ -0.64
ITGB1-204ENST00000417122 ICAM4Q14773 271 aa11.06□□□□□ -0.64
ITGB1-204ENST00000417122 FFAR4Q5NUL3 377 aa11.06□□□□□ -0.64
ITGB1-204ENST00000417122 RNASE8Q8TDE3 154 aaKnown RBP11.06□□□□□ -0.64
ITGB1-204ENST00000417122 TMEM263Q8WUH6 116 aaKnown RBP11.06□□□□□ -0.64
ITGB1-204ENST00000417122 PAXXQ9BUH6 204 aa11.06□□□□□ -0.64
ITGB1-204ENST00000417122 TIMM8BQ9Y5J9 83 aaPredicted RBP11.06□□□□□ -0.64
ITGB1-204ENST00000417122 TRAV12-3A0A0B4J271 114 aa11.05□□□□□ -0.64
ITGB1-204ENST00000417122 OR10J4P0C629 311 aa11.05□□□□□ -0.64
ITGB1-204ENST00000417122 POM121L12Q8N7R1 296 aa11.05□□□□□ -0.64
ITGB1-204ENST00000417122 RNF141Q8WVD5 230 aa11.05□□□□□ -0.64
ITGB1-204ENST00000417122 FXYD5Q96DB9 178 aa11.05□□□□□ -0.64
ITGB1-204ENST00000417122 LINC00477Q96M19 166 aa11.05□□□□□ -0.64
ITGB1-204ENST00000417122 WFDC1Q9HC57 220 aa11.05□□□□□ -0.64
ITGB1-204ENST00000417122 OR7C2O60412 319 aa11.04□□□□□ -0.64
ITGB1-204ENST00000417122 FAM122CQ6P4D5 195 aa11.04□□□□□ -0.64
ITGB1-204ENST00000417122 TMEM88Q6PEY1 159 aa11.04□□□□□ -0.64
ITGB1-204ENST00000417122 CCDC28AQ8IWP9 274 aa11.04□□□□□ -0.64
ITGB1-204ENST00000417122 AGPAT4-IT1Q9H0P7 198 aa11.04□□□□□ -0.64
ITGB1-204ENST00000417122 MED28Q9H204 178 aa11.04□□□□□ -0.64
ITGB1-204ENST00000417122 DNAH6Q9C0G6 4158 aa11.03□□□□□ -0.64
ITGB1-204ENST00000417122 SLC25A5P05141 298 aaKnown RBP11.03□□□□□ -0.64
ITGB1-204ENST00000417122 C9orf47Q6ZRZ4 202 aa11.03□□□□□ -0.64
ITGB1-204ENST00000417122 ZNF503Q96F45 646 aa11.03□□□□□ -0.64
ITGB1-204ENST00000417122 PHYHIPLQ96FC7 376 aa11.03□□□□□ -0.64
ITGB1-204ENST00000417122 FAM19A4Q96LR4 140 aa11.03□□□□□ -0.64
ITGB1-204ENST00000417122 NOP10Q9NPE3 64 aaKnown RBP11.03□□□□□ -0.64
ITGB1-204ENST00000417122 IGKV2-40A0A087WW87 121 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 221.4 ms