RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 ODAMA1E959 279 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 C5orf63A6NC05 138 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 H3BP45 60 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 M0R1X1 148 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 CA2P00918 260 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 APCSP02743 223 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 C3orf79P0CE67 100 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 IAPPP10997 89 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 CBLN1P23435 193 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 GCHFRP30047 84 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 GNG4P50150 75 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 ZNF83P51522 516 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 GFERP55789 205 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 RIPPLY3P57055 190 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 UBE2G1P62253 170 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 HIST1H1AQ02539 215 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 CEACAM16Q2WEN9 425 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 TDRG1Q3Y452 100 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 PRR30Q53SZ7 412 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 TEX36Q5VZQ5 186 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 Q6P435 159 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 AAED1Q7RTV5 226 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 OR5A1Q8NGJ0 315 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 OR1L1Q8NH94 360 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 SLC25A40Q8TBP6 338 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 TSKUQ8WUA8 353 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 TMEM70Q9BUB7 260 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 RTL8AQ9BWD3 113 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 MRPL32Q9BYC8 188 aaKnown RBP2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 DEFB126Q9BYW3 111 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 TMEM191AQ9H0A3 160 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 RNASE7Q9H1E1 156 aaKnown RBP2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 CST9LQ9H4G1 147 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 ZNF331Q9NQX6 463 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 NAT8BQ9UHF3 227 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 TRAPPC2LQ9UL33 140 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 ZNF257Q9Y2Q1 563 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 PTPRSQ13332 1948 aa2.7□□□□□ -1.98
HMGB3P23-201ENST00000414981 HCFC1P51610 2035 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 RALGAPA1Q6GYQ0 2036 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 TDRD6O60522 2096 aaKnown RBP2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 ATG2BQ96BY7 2078 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 RP1P56715 2156 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 A0A0G2JLM5 398 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 FAM236DA0A1B0GTK5 79 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 TEX48A0A1B0GUV7 120 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 TMEM30CPA0ZSE6 113 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 GRIFINA4D1Z8 144 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 A6NDN8 102 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 C2orf70A6NJV1 201 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 F6UB75 175 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 INS-IGF2F8WCM5 200 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 H7C1H1 209 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 CORTO00230 105 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 ARL14EPLP0DKL9 152 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 FAM236CP0DP71 79 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 CA7P43166 264 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 VDAC2P45880 294 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 ATP5G3P48201 142 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 HSPE1P61604 102 aaKnown RBP2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 BATFQ16520 125 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 SLC25A34Q6PIV7 304 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 ZCCHC24Q8N2G6 241 aaKnown RBP2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 ZNRF1Q8ND25 227 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 OR1N2Q8NGR9 330 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 OR2K2Q8NGT1 345 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 C18orf32Q8TCD1 76 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 LMX1AQ8TE12 382 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 CYYR1Q96J86 154 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 FAM19A4Q96LR4 140 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 NDFIP1Q9BT67 221 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 GGTLC1Q9BX51 225 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 OR2D2Q9H210 308 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 TNFRSF19Q9NS68 423 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 HSPB8Q9UJY1 196 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 PRNDQ9UKY0 176 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 KIF25-AS1Q9Y6Z4 181 aa2.69□□□□□ -1.98
HMGB3P23-201ENST00000414981 TNRC6BQ9UPQ9 1833 aaKnown RBP2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 A0A0J9YW62 118 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 A0A1B0GWB2 263 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 A0A1B0GXF2 115 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 TMEM189A5PLL7 270 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 LINC01619G3V211 115 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 H3BRM9 83 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 J3QR89 54 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 TAX1BP3O14907 124 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 OR7C2O60412 319 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 MRPL33O75394 65 aaKnown RBP2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 HBZP02008 142 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 IGLC1P0CG04 106 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 RBMY1CP0DJD4 496 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 CT45A10P0DMU9 189 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 SRIP30626 198 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 GPM6AP51674 278 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 TFF3Q07654 80 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 Q1RN00 199 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 CLEC12BQ2HXU8 276 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 NSUN5P1Q3KNT7 163 aa2.68□□□□□ -1.98
HMGB3P23-201ENST00000414981 CENPWQ5EE01 88 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms