RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 Q8NAQ8 132 aa10.67□□□□□ -0.7
CHD1-202ENST00000414220 HSD17B11Q8NBQ5 300 aa10.67□□□□□ -0.7
CHD1-202ENST00000414220 OR10G4Q8NGN3 311 aa10.67□□□□□ -0.7
CHD1-202ENST00000414220 OR10G9Q8NGN4 311 aa10.67□□□□□ -0.7
CHD1-202ENST00000414220 OR10G7Q8NGN6 311 aa10.67□□□□□ -0.7
CHD1-202ENST00000414220 RFNGQ9Y644 331 aa10.67□□□□□ -0.7
CHD1-202ENST00000414220 TENM3Q9P273 2699 aa10.66□□□□□ -0.7
CHD1-202ENST00000414220 ZNF705FA8MVS1 300 aaPredicted RBP10.66□□□□□ -0.7
CHD1-202ENST00000414220 DEFB4AO15263 64 aa10.66□□□□□ -0.7
CHD1-202ENST00000414220 CDKN1BP46527 198 aa10.66□□□□□ -0.7
CHD1-202ENST00000414220 CSN1S1P47710 185 aa10.66□□□□□ -0.7
CHD1-202ENST00000414220 UBE2L3P68036 154 aaKnown RBP10.66□□□□□ -0.7
CHD1-202ENST00000414220 RRN3P1Q2M238 152 aa10.66□□□□□ -0.7
CHD1-202ENST00000414220 AMTNQ6UX39 209 aa10.66□□□□□ -0.7
CHD1-202ENST00000414220 PQLC2Q6ZP29 291 aa10.66□□□□□ -0.7
CHD1-202ENST00000414220 LYPD1Q8N2G4 141 aa10.66□□□□□ -0.7
CHD1-202ENST00000414220 OR2G3Q8NGZ4 309 aa10.66□□□□□ -0.7
CHD1-202ENST00000414220 FAM167A-AS1Q96KT0 104 aa10.66□□□□□ -0.7
CHD1-202ENST00000414220 TEX48A0A1B0GUV7 120 aa10.65□□□□□ -0.7
CHD1-202ENST00000414220 M0R2Z0 102 aa10.65□□□□□ -0.7
CHD1-202ENST00000414220 ARPC5O15511 151 aa10.65□□□□□ -0.7
CHD1-202ENST00000414220 JTBO76095 146 aa10.65□□□□□ -0.7
CHD1-202ENST00000414220 OR10J4P0C629 311 aa10.65□□□□□ -0.7
CHD1-202ENST00000414220 ATP6V0CP27449 155 aa10.65□□□□□ -0.7
CHD1-202ENST00000414220 LEPP41159 167 aa10.65□□□□□ -0.7
CHD1-202ENST00000414220 FAM74A1Q5RGS3 127 aa10.65□□□□□ -0.7
CHD1-202ENST00000414220 FAM122CQ6P4D5 195 aa10.65□□□□□ -0.7
CHD1-202ENST00000414220 TMEM256Q8N2U0 113 aa10.65□□□□□ -0.7
CHD1-202ENST00000414220 RNF222A6NCQ9 220 aa10.64□□□□□ -0.71
CHD1-202ENST00000414220 ICAM4Q14773 271 aa10.64□□□□□ -0.71
CHD1-202ENST00000414220 CEMP1Q6PRD7 247 aaPredicted RBP10.64□□□□□ -0.71
CHD1-202ENST00000414220 FXYD5Q96DB9 178 aa10.64□□□□□ -0.71
CHD1-202ENST00000414220 LINC00477Q96M19 166 aa10.64□□□□□ -0.71
CHD1-202ENST00000414220 ODF3Q96PU9 254 aa10.64□□□□□ -0.71
CHD1-202ENST00000414220 C20orf144Q9BQM9 153 aa10.64□□□□□ -0.71
CHD1-202ENST00000414220 C11orf94C9JXX5 98 aa10.63□□□□□ -0.71
CHD1-202ENST00000414220 NDUFB4O95168 129 aa10.63□□□□□ -0.71
CHD1-202ENST00000414220 SPART-AS1P0CW21 52 aa10.63□□□□□ -0.71
CHD1-202ENST00000414220 RBMY1A1P0DJD3 496 aaKnown RBP10.63□□□□□ -0.71
CHD1-202ENST00000414220 RBMY1CP0DJD4 496 aa10.63□□□□□ -0.71
CHD1-202ENST00000414220 CDC34P49427 236 aaPredicted RBP10.63□□□□□ -0.71
CHD1-202ENST00000414220 RANP62826 216 aaKnown RBP10.63□□□□□ -0.71
CHD1-202ENST00000414220 RBMY1FQ15415 496 aaKnown RBP10.63□□□□□ -0.71
CHD1-202ENST00000414220 TMEM78Q5T7P6 136 aa10.63□□□□□ -0.71
CHD1-202ENST00000414220 EXOC3-AS1Q8N2X6 119 aa10.63□□□□□ -0.71
CHD1-202ENST00000414220 RXFP4Q8TDU9 374 aa10.63□□□□□ -0.71
CHD1-202ENST00000414220 PHLDA1Q8WV24 401 aaPredicted RBP10.63□□□□□ -0.71
CHD1-202ENST00000414220 LINC01587Q99440 93 aa10.63□□□□□ -0.71
CHD1-202ENST00000414220 ACTR3CQ9C0K3 210 aaPredicted RBP10.63□□□□□ -0.71
CHD1-202ENST00000414220 TRAV12-2A0A075B6T6 113 aa10.62□□□□□ -0.71
CHD1-202ENST00000414220 PRAC2D3DTV9 90 aa10.62□□□□□ -0.71
CHD1-202ENST00000414220 NPIPB6E9PJ23 425 aa10.62□□□□□ -0.71
CHD1-202ENST00000414220 M0R3E3 92 aa10.62□□□□□ -0.71
CHD1-202ENST00000414220 NANOS2P60321 138 aaKnown RBP10.62□□□□□ -0.71
CHD1-202ENST00000414220 RAB2AP61019 212 aa10.62□□□□□ -0.71
CHD1-202ENST00000414220 RPL7L1Q6DKI1 246 aaKnown RBP10.62□□□□□ -0.71
CHD1-202ENST00000414220 C1orf158Q8N1D5 194 aa10.62□□□□□ -0.71
CHD1-202ENST00000414220 RPP25LQ8N5L8 163 aaKnown RBP10.62□□□□□ -0.71
CHD1-202ENST00000414220 CMTM2Q8TAZ6 248 aa10.62□□□□□ -0.71
CHD1-202ENST00000414220 A0A0D9SG52 128 aa10.61□□□□□ -0.71
CHD1-202ENST00000414220 LOC102723971A0A1B0GUV8 181 aa10.61□□□□□ -0.71
CHD1-202ENST00000414220 HMSDA8MTL9 139 aa10.61□□□□□ -0.71
CHD1-202ENST00000414220 EMP1P54849 157 aa10.61□□□□□ -0.71
CHD1-202ENST00000414220 CCDC28AQ8IWP9 274 aa10.61□□□□□ -0.71
CHD1-202ENST00000414220 BAP18Q8IXM2 172 aa10.61□□□□□ -0.71
CHD1-202ENST00000414220 ARPC5LQ9BPX5 153 aa10.61□□□□□ -0.71
CHD1-202ENST00000414220 Q9H3A6 140 aa10.61□□□□□ -0.71
CHD1-202ENST00000414220 KANTRA0A1W2PQU2 76 aa10.6□□□□□ -0.71
CHD1-202ENST00000414220 H7BYZ3 331 aa10.6□□□□□ -0.71
CHD1-202ENST00000414220 CRXO43186 299 aaPredicted RBP10.6□□□□□ -0.71
CHD1-202ENST00000414220 TAS2R60P59551 318 aa10.6□□□□□ -0.71
CHD1-202ENST00000414220 EIF5AP63241 154 aaKnown RBP10.6□□□□□ -0.71
CHD1-202ENST00000414220 ZNF345Q14585 488 aa10.6□□□□□ -0.71
CHD1-202ENST00000414220 AKR1C8PQ5T2L2 129 aa10.6□□□□□ -0.71
CHD1-202ENST00000414220 C2CD4CQ8TF44 421 aa10.6□□□□□ -0.71
CHD1-202ENST00000414220 NIPSNAP3BQ9BS92 247 aa10.6□□□□□ -0.71
CHD1-202ENST00000414220 OTORQ9NRC9 128 aa10.6□□□□□ -0.71
CHD1-202ENST00000414220 TRAV10A0A0B4J240 114 aa10.59□□□□□ -0.71
CHD1-202ENST00000414220 G3V3Q6 166 aa10.59□□□□□ -0.71
CHD1-202ENST00000414220 SMLR1H3BR10 107 aa10.59□□□□□ -0.71
CHD1-202ENST00000414220 CXorf1O96002 111 aa10.59□□□□□ -0.71
CHD1-202ENST00000414220 SLC25A5P05141 298 aaKnown RBP10.59□□□□□ -0.71
CHD1-202ENST00000414220 STAG3L2P0CL84 134 aa10.59□□□□□ -0.71
CHD1-202ENST00000414220 STAG3L3P0CL85 134 aa10.59□□□□□ -0.71
CHD1-202ENST00000414220 C9orf47Q6ZRZ4 202 aa10.59□□□□□ -0.71
CHD1-202ENST00000414220 RAB24Q969Q5 203 aa10.59□□□□□ -0.71
CHD1-202ENST00000414220 ZNF503Q96F45 646 aa10.59□□□□□ -0.71
CHD1-202ENST00000414220 PHYHIPLQ96FC7 376 aa10.59□□□□□ -0.71
CHD1-202ENST00000414220 TMEM167BQ9NRX6 74 aa10.59□□□□□ -0.71
CHD1-202ENST00000414220 RBAKDNA6NC62 111 aa10.58□□□□□ -0.72
CHD1-202ENST00000414220 PGPA6NDG6 321 aa10.58□□□□□ -0.72
CHD1-202ENST00000414220 HMGB3O15347 200 aaKnown RBP10.58□□□□□ -0.72
CHD1-202ENST00000414220 PFDN1O60925 122 aa10.58□□□□□ -0.72
CHD1-202ENST00000414220 NMBP08949 121 aa10.58□□□□□ -0.72
CHD1-202ENST00000414220 CT45A10P0DMU9 189 aa10.58□□□□□ -0.72
CHD1-202ENST00000414220 PRB4P10163 310 aaPredicted RBP10.58□□□□□ -0.72
CHD1-202ENST00000414220 HTN1P15515 57 aa10.58□□□□□ -0.72
CHD1-202ENST00000414220 TCTAP57738 103 aa10.58□□□□□ -0.72
CHD1-202ENST00000414220 ZNF493Q6ZR52 646 aa10.58□□□□□ -0.72
CHD1-202ENST00000414220 KCNRGQ8N5I3 272 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms