RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 NDUFA3O95167 84 aa13.79□□□□□ -0.2
SDCBP-202ENST00000413219 PRB3Q04118 309 aaPredicted RBP13.79□□□□□ -0.2
SDCBP-202ENST00000413219 EGR2P11161 476 aaPredicted RBP13.79□□□□□ -0.2
SDCBP-202ENST00000413219 RPL7P18124 248 aaKnown RBP13.79□□□□□ -0.2
SDCBP-202ENST00000413219 LINC01559Q495D7 138 aa13.79□□□□□ -0.2
SDCBP-202ENST00000413219 IGLV11-55A0A075B6I3 123 aa13.78□□□□□ -0.2
SDCBP-202ENST00000413219 NPIPB5A8MRT5 1133 aa13.78□□□□□ -0.2
SDCBP-202ENST00000413219 G3V4G9 280 aa13.78□□□□□ -0.2
SDCBP-202ENST00000413219 TWIST1Q15672 202 aa13.78□□□□□ -0.2
SDCBP-202ENST00000413219 MAP1LC3AQ9H492 121 aa13.78□□□□□ -0.2
SDCBP-202ENST00000413219 HIGD1BQ9P298 99 aa13.78□□□□□ -0.2
SDCBP-202ENST00000413219 HILPDAQ9Y5L2 63 aa13.78□□□□□ -0.2
SDCBP-202ENST00000413219 IGKV2-40A0A087WW87 121 aaPredicted RBP13.78□□□□□ -0.2
SDCBP-202ENST00000413219 A0A1W2PPM0 123 aa13.78□□□□□ -0.2
SDCBP-202ENST00000413219 SAP30O75446 220 aa13.78□□□□□ -0.2
SDCBP-202ENST00000413219 IGKV2D-40P01614 121 aaPredicted RBP13.78□□□□□ -0.2
SDCBP-202ENST00000413219 NEGR1Q7Z3B1 354 aa13.78□□□□□ -0.2
SDCBP-202ENST00000413219 CNFNQ9BYD5 112 aa13.78□□□□□ -0.2
SDCBP-202ENST00000413219 SPENQ96T58 3664 aaKnown RBP13.77□□□□□ -0.2
SDCBP-202ENST00000413219 LOC400499M0QZD8 3231 aa13.77□□□□□ -0.2
SDCBP-202ENST00000413219 PRB4P10163 310 aaPredicted RBP13.77□□□□□ -0.21
SDCBP-202ENST00000413219 NMUP48645 174 aa13.77□□□□□ -0.21
SDCBP-202ENST00000413219 PCP2Q8IVA1 136 aa13.77□□□□□ -0.21
SDCBP-202ENST00000413219 BCL6BQ8N143 479 aaPredicted RBP13.77□□□□□ -0.21
SDCBP-202ENST00000413219 FANCD2OSQ96PS1 177 aa13.77□□□□□ -0.21
SDCBP-202ENST00000413219 ZMAT4Q9H898 229 aa13.77□□□□□ -0.21
SDCBP-202ENST00000413219 FXYD7P58549 80 aa13.76□□□□□ -0.21
SDCBP-202ENST00000413219 IGFBPL1Q8WX77 278 aa13.76□□□□□ -0.21
SDCBP-202ENST00000413219 CFHR4Q92496 578 aa13.76□□□□□ -0.21
SDCBP-202ENST00000413219 MUC3AQ02505 3323 aa13.76□□□□□ -0.21
SDCBP-202ENST00000413219 SMKR1H3BMG3 65 aa13.76□□□□□ -0.21
SDCBP-202ENST00000413219 RNF185Q96GF1 192 aa13.76□□□□□ -0.21
SDCBP-202ENST00000413219 NXT2Q9NPJ8 142 aaKnown RBP13.76□□□□□ -0.21
SDCBP-202ENST00000413219 DPM3Q9P2X0 92 aa13.76□□□□□ -0.21
SDCBP-202ENST00000413219 DKK2Q9UBU2 259 aa13.76□□□□□ -0.21
SDCBP-202ENST00000413219 F8W735 103 aaPredicted RBP13.75□□□□□ -0.21
SDCBP-202ENST00000413219 FCER1GP30273 86 aa13.75□□□□□ -0.21
SDCBP-202ENST00000413219 LY6G5BQ8NDX9 201 aa13.75□□□□□ -0.21
SDCBP-202ENST00000413219 C5orf64Q2M2E5 130 aa13.75□□□□□ -0.21
SDCBP-202ENST00000413219 KLF17Q5JT82 389 aaPredicted RBP13.75□□□□□ -0.21
SDCBP-202ENST00000413219 OR11H6Q8NGC7 330 aa13.75□□□□□ -0.21
SDCBP-202ENST00000413219 SPCS1Q9Y6A9 102 aa13.75□□□□□ -0.21
SDCBP-202ENST00000413219 CUL9Q8IWT3 2517 aa13.74□□□□□ -0.21
SDCBP-202ENST00000413219 SCGB2A1O75556 95 aa13.74□□□□□ -0.21
SDCBP-202ENST00000413219 SMIM17P0DL12 118 aa13.74□□□□□ -0.21
SDCBP-202ENST00000413219 S100A7P31151 101 aa13.74□□□□□ -0.21
SDCBP-202ENST00000413219 ZNF80P51504 273 aaPredicted RBP13.74□□□□□ -0.21
SDCBP-202ENST00000413219 PSMG3-AS1Q96PY0 264 aa13.74□□□□□ -0.21
SDCBP-202ENST00000413219 C21orf62Q9NYP8 219 aa13.74□□□□□ -0.21
SDCBP-202ENST00000413219 SMIM13P0DJ93 91 aa13.73□□□□□ -0.21
SDCBP-202ENST00000413219 FABP2P12104 132 aa13.73□□□□□ -0.21
SDCBP-202ENST00000413219 ODF1Q14990 250 aa13.73□□□□□ -0.21
SDCBP-202ENST00000413219 ZNF575Q86XF7 245 aa13.73□□□□□ -0.21
SDCBP-202ENST00000413219 TTC9CQ8N5M4 171 aa13.73□□□□□ -0.21
SDCBP-202ENST00000413219 ONECUT1Q9UBC0 465 aa13.73□□□□□ -0.21
SDCBP-202ENST00000413219 SMPXQ9UHP9 88 aa13.73□□□□□ -0.21
SDCBP-202ENST00000413219 S4R3C0 116 aa13.73□□□□□ -0.21
SDCBP-202ENST00000413219 HLA-DRB4P13762 266 aa13.73□□□□□ -0.21
SDCBP-202ENST00000413219 RAB37Q96AX2 223 aa13.73□□□□□ -0.21
SDCBP-202ENST00000413219 HLA-DRB4X5D2U9 266 aa13.73□□□□□ -0.21
SDCBP-202ENST00000413219 ABCA1O95477 2261 aa13.73□□□□□ -0.21
SDCBP-202ENST00000413219 FABP5P3A8MUU1 101 aa13.72□□□□□ -0.21
SDCBP-202ENST00000413219 LYNX1G3V0Z9 82 aa13.72□□□□□ -0.21
SDCBP-202ENST00000413219 LYNX1P0DP58 116 aa13.72□□□□□ -0.21
SDCBP-202ENST00000413219 TCTAP57738 103 aa13.72□□□□□ -0.21
SDCBP-202ENST00000413219 PRSS57Q6UWY2 283 aa13.72□□□□□ -0.21
SDCBP-202ENST00000413219 ZNF562Q6V9R5 426 aa13.72□□□□□ -0.21
SDCBP-202ENST00000413219 VGLL1Q99990 258 aa13.72□□□□□ -0.21
SDCBP-202ENST00000413219 NAA38Q9BRA0 125 aaKnown RBP13.72□□□□□ -0.21
SDCBP-202ENST00000413219 HHLA3Q9XRX5 114 aa13.72□□□□□ -0.21
SDCBP-202ENST00000413219 IGHG4P01861 327 aa13.71□□□□□ -0.21
SDCBP-202ENST00000413219 CD3EP07766 207 aa13.71□□□□□ -0.21
SDCBP-202ENST00000413219 EVI2AP22794 236 aa13.71□□□□□ -0.21
SDCBP-202ENST00000413219 LEPP41159 167 aa13.71□□□□□ -0.21
SDCBP-202ENST00000413219 Q8TAT8 98 aa13.71□□□□□ -0.21
SDCBP-202ENST00000413219 ARPC1AQ92747 370 aa13.71□□□□□ -0.21
SDCBP-202ENST00000413219 ATP5LO75964 103 aa13.71□□□□□ -0.21
SDCBP-202ENST00000413219 TNFRSF6BO95407 300 aa13.71□□□□□ -0.21
SDCBP-202ENST00000413219 SAMD5Q5TGI4 173 aa13.71□□□□□ -0.21
SDCBP-202ENST00000413219 SMAD5-AS1Q9Y6J3 95 aa13.71□□□□□ -0.21
SDCBP-202ENST00000413219 ZGRF1Q86YA3 2104 aa13.7□□□□□ -0.22
SDCBP-202ENST00000413219 ORM1P02763 201 aa13.7□□□□□ -0.22
SDCBP-202ENST00000413219 IGKCP01834 107 aa13.7□□□□□ -0.22
SDCBP-202ENST00000413219 RIPPLY3P57055 190 aa13.7□□□□□ -0.22
SDCBP-202ENST00000413219 WFDC3Q8IUB2 231 aa13.7□□□□□ -0.22
SDCBP-202ENST00000413219 C18orf15Q96N68 181 aa13.7□□□□□ -0.22
SDCBP-202ENST00000413219 MSRB1Q9NZV6 116 aa13.7□□□□□ -0.22
SDCBP-202ENST00000413219 SH3BGRL2Q9UJC5 107 aa13.7□□□□□ -0.22
SDCBP-202ENST00000413219 CHAC1Q9BUX1 264 aa13.69□□□□□ -0.22
SDCBP-202ENST00000413219 IGKV2D-26A0A0A0MRZ7 120 aa13.68□□□□□ -0.22
SDCBP-202ENST00000413219 ODF3BA8MYP8 253 aa13.68□□□□□ -0.22
SDCBP-202ENST00000413219 ROS1P08922 2347 aa13.68□□□□□ -0.22
SDCBP-202ENST00000413219 SRSF1Q07955 248 aaKnown RBP eCLIP13.68□□□□□ -0.22
SDCBP-202ENST00000413219 Q8N8P6 123 aa13.68□□□□□ -0.22
SDCBP-202ENST00000413219 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.68□□□□□ -0.22
SDCBP-202ENST00000413219 RBAKDNA6NC62 111 aa13.68□□□□□ -0.22
SDCBP-202ENST00000413219 M0R1W7 72 aa13.68□□□□□ -0.22
SDCBP-202ENST00000413219 DPM2O94777 84 aa13.68□□□□□ -0.22
SDCBP-202ENST00000413219 PRSS1P07477 247 aa13.68□□□□□ -0.22
SDCBP-202ENST00000413219 CTSGP08311 255 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms