RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 CTSGP08311 255 aa13.17□□□□□ -0.3
TOM1-204ENST00000411850 ZNF738Q8NE65 137 aa13.17□□□□□ -0.3
TOM1-204ENST00000411850 OR10AG1Q8NH19 301 aa13.17□□□□□ -0.3
TOM1-204ENST00000411850 PPP1R14DQ9NXH3 145 aa13.17□□□□□ -0.3
TOM1-204ENST00000411850 PRR25Q96S07 402 aa13.17□□□□□ -0.3
TOM1-204ENST00000411850 TACC2O95359 2948 aa13.17□□□□□ -0.3
TOM1-204ENST00000411850 IGKV2-40A0A087WW87 121 aaPredicted RBP13.16□□□□□ -0.3
TOM1-204ENST00000411850 OR2T8A6NH00 312 aa13.16□□□□□ -0.3
TOM1-204ENST00000411850 IGKV2D-40P01614 121 aaPredicted RBP13.16□□□□□ -0.3
TOM1-204ENST00000411850 EGR2P11161 476 aaPredicted RBP13.16□□□□□ -0.3
TOM1-204ENST00000411850 FAM104BQ5XKR9 115 aa13.16□□□□□ -0.3
TOM1-204ENST00000411850 RABAC1Q9UI14 185 aa13.16□□□□□ -0.3
TOM1-204ENST00000411850 ARHGAP32A7KAX9 2087 aa13.16□□□□□ -0.3
TOM1-204ENST00000411850 NCOR2Q9Y618 2525 aa13.16□□□□□ -0.3
TOM1-204ENST00000411850 TCF21O43680 179 aa13.16□□□□□ -0.3
TOM1-204ENST00000411850 CHD8Q9HCK8 2581 aa13.16□□□□□ -0.3
TOM1-204ENST00000411850 RELNP78509 3460 aa13.16□□□□□ -0.3
TOM1-204ENST00000411850 IGHV3-23P01764 117 aa13.15□□□□□ -0.3
TOM1-204ENST00000411850 TMEM11P17152 192 aa13.15□□□□□ -0.3
TOM1-204ENST00000411850 RELQ04864 619 aaPredicted RBP13.15□□□□□ -0.3
TOM1-204ENST00000411850 TP73-AS1Q9UF72 201 aa13.15□□□□□ -0.3
TOM1-204ENST00000411850 SMAD5-AS1Q9Y6J3 95 aa13.15□□□□□ -0.3
TOM1-204ENST00000411850 IGHV7-81A0A0B4J1V7 117 aa13.15□□□□□ -0.3
TOM1-204ENST00000411850 TMEM213A2RRL7 107 aa13.15□□□□□ -0.3
TOM1-204ENST00000411850 D6R8Y8 96 aa13.15□□□□□ -0.3
TOM1-204ENST00000411850 S100A7P31151 101 aa13.15□□□□□ -0.3
TOM1-204ENST00000411850 IFI27P40305 119 aaPredicted RBP13.15□□□□□ -0.3
TOM1-204ENST00000411850 RPS20P60866 119 aaKnown RBP13.15□□□□□ -0.3
TOM1-204ENST00000411850 MCRIP2Q9BUT9 160 aaKnown RBP13.15□□□□□ -0.3
TOM1-204ENST00000411850 ITPR1Q14643 2758 aa13.15□□□□□ -0.3
TOM1-204ENST00000411850 TPRP12270 2363 aaKnown RBP13.14□□□□□ -0.31
TOM1-204ENST00000411850 TMSB15BA0A087X1C1 80 aa13.14□□□□□ -0.31
TOM1-204ENST00000411850 MPV17L2Q567V2 206 aa13.14□□□□□ -0.31
TOM1-204ENST00000411850 PRELID3AQ96N28 172 aa13.14□□□□□ -0.31
TOM1-204ENST00000411850 SIGLEC8Q9NYZ4 499 aa13.14□□□□□ -0.31
TOM1-204ENST00000411850 DCHS2Q6V1P9 2916 aa13.14□□□□□ -0.31
TOM1-204ENST00000411850 CCL25O15444 150 aa13.14□□□□□ -0.31
TOM1-204ENST00000411850 IGHG4P01861 327 aa13.14□□□□□ -0.31
TOM1-204ENST00000411850 DTX2Q86UW9 622 aa13.14□□□□□ -0.31
TOM1-204ENST00000411850 ORMDL3Q8N138 153 aa13.14□□□□□ -0.31
TOM1-204ENST00000411850 LRBAP50851 2863 aa13.13□□□□□ -0.31
TOM1-204ENST00000411850 A0A096LNJ9 63 aa13.13□□□□□ -0.31
TOM1-204ENST00000411850 H0Y8G0 127 aa13.13□□□□□ -0.31
TOM1-204ENST00000411850 BMI1P35226 326 aa13.13□□□□□ -0.31
TOM1-204ENST00000411850 PTTG1IPP53801 180 aa13.13□□□□□ -0.31
TOM1-204ENST00000411850 SRSF2Q01130 221 aaKnown RBP13.13□□□□□ -0.31
TOM1-204ENST00000411850 UBE2V1Q13404 147 aa13.13□□□□□ -0.31
TOM1-204ENST00000411850 Q6ZVH6 145 aa13.13□□□□□ -0.31
TOM1-204ENST00000411850 AMN1Q8IY45 258 aa13.13□□□□□ -0.31
TOM1-204ENST00000411850 ZFP36P26651 326 aaKnown RBP13.13□□□□□ -0.31
TOM1-204ENST00000411850 KLK9Q2XQG4 91 aa13.13□□□□□ -0.31
TOM1-204ENST00000411850 Q8N9W7 124 aa13.13□□□□□ -0.31
TOM1-204ENST00000411850 SIRPDQ9H106 197 aa13.13□□□□□ -0.31
TOM1-204ENST00000411850 KLK9Q9UKQ9 250 aa13.13□□□□□ -0.31
TOM1-204ENST00000411850 TIMM8BQ9Y5J9 83 aaPredicted RBP13.13□□□□□ -0.31
TOM1-204ENST00000411850 FAM106CPP0CH98 169 aa13.12□□□□□ -0.31
TOM1-204ENST00000411850 FAM106AQ4KMX7 169 aa13.12□□□□□ -0.31
TOM1-204ENST00000411850 MRPL51Q4U2R6 128 aaKnown RBP13.12□□□□□ -0.31
TOM1-204ENST00000411850 BVES-AS1Q5T3Y7 98 aa13.12□□□□□ -0.31
TOM1-204ENST00000411850 VGLL1Q99990 258 aa13.12□□□□□ -0.31
TOM1-204ENST00000411850 NUDT3O95989 172 aa13.12□□□□□ -0.31
TOM1-204ENST00000411850 IGLC6P0CF74 106 aa13.12□□□□□ -0.31
TOM1-204ENST00000411850 C12orf54Q6X4T0 127 aa13.12□□□□□ -0.31
TOM1-204ENST00000411850 FAM110DQ8TAY7 271 aaPredicted RBP13.12□□□□□ -0.31
TOM1-204ENST00000411850 PMCHL2Q9BQD1 86 aa13.12□□□□□ -0.31
TOM1-204ENST00000411850 ABCA4P78363 2273 aa13.11□□□□□ -0.31
TOM1-204ENST00000411850 NCR2O95944 276 aa13.11□□□□□ -0.31
TOM1-204ENST00000411850 ZNF80P51504 273 aaPredicted RBP13.11□□□□□ -0.31
TOM1-204ENST00000411850 FER1L6-AS1Q8NA97 138 aa13.11□□□□□ -0.31
TOM1-204ENST00000411850 Q8TAT8 98 aa13.11□□□□□ -0.31
TOM1-204ENST00000411850 COX8AP10176 69 aa13.1□□□□□ -0.31
TOM1-204ENST00000411850 LOXL1Q08397 574 aaPredicted RBP13.1□□□□□ -0.31
TOM1-204ENST00000411850 ZNF502Q8TBZ5 544 aa13.1□□□□□ -0.31
TOM1-204ENST00000411850 DPF1Q92782 380 aa13.1□□□□□ -0.31
TOM1-204ENST00000411850 LOC389332A0A1B0GUA5 103 aa13.1□□□□□ -0.31
TOM1-204ENST00000411850 HIST1H1AQ02539 215 aaPredicted RBP13.1□□□□□ -0.31
TOM1-204ENST00000411850 PAX8Q06710 450 aa13.1□□□□□ -0.31
TOM1-204ENST00000411850 ZNF575Q86XF7 245 aa13.1□□□□□ -0.31
TOM1-204ENST00000411850 PIEZO1Q92508 2521 aa13.1□□□□□ -0.31
TOM1-204ENST00000411850 A0A087X0K7 114 aa13.09□□□□□ -0.31
TOM1-204ENST00000411850 RAB9AP51151 201 aa13.09□□□□□ -0.31
TOM1-204ENST00000411850 PSMG3-AS1Q96PY0 264 aa13.09□□□□□ -0.31
TOM1-204ENST00000411850 HLA-DMBP28068 263 aa13.09□□□□□ -0.31
TOM1-204ENST00000411850 DEFB125Q8N687 156 aa13.09□□□□□ -0.31
TOM1-204ENST00000411850 CACNA1AO00555 2505 aa13.09□□□□□ -0.31
TOM1-204ENST00000411850 NBASA2RRP1 2371 aa13.09□□□□□ -0.31
TOM1-204ENST00000411850 IGHV2-70DA0A0C4DH43 119 aa13.08□□□□□ -0.32
TOM1-204ENST00000411850 TWIST1Q15672 202 aa13.08□□□□□ -0.32
TOM1-204ENST00000411850 LGALS9BQ3B8N2 356 aa13.08□□□□□ -0.32
TOM1-204ENST00000411850 IGFL4Q6B9Z1 124 aa13.08□□□□□ -0.32
TOM1-204ENST00000411850 LGALS9CQ6DKI2 356 aa13.08□□□□□ -0.32
TOM1-204ENST00000411850 AJUBAQ96IF1 538 aa13.08□□□□□ -0.32
TOM1-204ENST00000411850 CNFNQ9BYD5 112 aa13.08□□□□□ -0.32
TOM1-204ENST00000411850 ZFAND3Q9H8U3 227 aa13.08□□□□□ -0.32
TOM1-204ENST00000411850 COL6A6A6NMZ7 2263 aa13.08□□□□□ -0.32
TOM1-204ENST00000411850 TMEM8BA6NDV4 472 aa13.08□□□□□ -0.32
TOM1-204ENST00000411850 UBE2E1P51965 193 aa13.08□□□□□ -0.32
TOM1-204ENST00000411850 C15orf32Q32M92 178 aa13.08□□□□□ -0.32
TOM1-204ENST00000411850 MUC21A0A0G2JKD1 596 aa13.07□□□□□ -0.32
TOM1-204ENST00000411850 MUC21A0A140T8X8 626 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms