RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 FAM90A27PA6NNH2 459 aa13.01□□□□□ -0.33
LIMS2-208ENST00000410011 IGLC6P0CF74 106 aa13.01□□□□□ -0.33
LIMS2-208ENST00000410011 GRNP28799 593 aaKnown RBP13.01□□□□□ -0.33
LIMS2-208ENST00000410011 KLRD1Q13241 179 aa13.01□□□□□ -0.33
LIMS2-208ENST00000410011 CNFNQ9BYD5 112 aa13.01□□□□□ -0.33
LIMS2-208ENST00000410011 RABAC1Q9UI14 185 aa13.01□□□□□ -0.33
LIMS2-208ENST00000410011 TMEM213A2RRL7 107 aa13□□□□□ -0.33
LIMS2-208ENST00000410011 GPR183P32249 361 aa13□□□□□ -0.33
LIMS2-208ENST00000410011 MRPL51Q4U2R6 128 aaKnown RBP13□□□□□ -0.33
LIMS2-208ENST00000410011 VMO1Q7Z5L0 202 aa13□□□□□ -0.33
LIMS2-208ENST00000410011 AMN1Q8IY45 258 aa13□□□□□ -0.33
LIMS2-208ENST00000410011 S4R3C0 116 aa13□□□□□ -0.33
LIMS2-208ENST00000410011 EGR2P11161 476 aaPredicted RBP13□□□□□ -0.33
LIMS2-208ENST00000410011 RAB9AP51151 201 aa13□□□□□ -0.33
LIMS2-208ENST00000410011 MCRIP2Q9BUT9 160 aaKnown RBP13□□□□□ -0.33
LIMS2-208ENST00000410011 TP73-AS1Q9UF72 201 aa13□□□□□ -0.33
LIMS2-208ENST00000410011 SMAD5-AS1Q9Y6J3 95 aa13□□□□□ -0.33
LIMS2-208ENST00000410011 IGHG4P01861 327 aa12.99□□□□□ -0.33
LIMS2-208ENST00000410011 FER1L6-AS1Q8NA97 138 aa12.99□□□□□ -0.33
LIMS2-208ENST00000410011 PSMG3-AS1Q96PY0 264 aa12.99□□□□□ -0.33
LIMS2-208ENST00000410011 IGKV2-40A0A087WW87 121 aaPredicted RBP12.99□□□□□ -0.33
LIMS2-208ENST00000410011 MUC21A0A0G2JKD1 596 aa12.99□□□□□ -0.33
LIMS2-208ENST00000410011 MUC21A0A140T8X8 626 aa12.99□□□□□ -0.33
LIMS2-208ENST00000410011 LINC01546A6NGU7 62 aa12.99□□□□□ -0.33
LIMS2-208ENST00000410011 NCR2O95944 276 aa12.99□□□□□ -0.33
LIMS2-208ENST00000410011 IGKV2D-40P01614 121 aaPredicted RBP12.99□□□□□ -0.33
LIMS2-208ENST00000410011 FAM106CPP0CH98 169 aa12.99□□□□□ -0.33
LIMS2-208ENST00000410011 FAM106AQ4KMX7 169 aa12.99□□□□□ -0.33
LIMS2-208ENST00000410011 MUC21Q5SSG8 566 aa12.99□□□□□ -0.33
LIMS2-208ENST00000410011 C2orf91Q6ZV80 131 aa12.99□□□□□ -0.33
LIMS2-208ENST00000410011 ZNF575Q86XF7 245 aa12.99□□□□□ -0.33
LIMS2-208ENST00000410011 RIF1Q5UIP0 2472 aaKnown RBP12.98□□□□□ -0.33
LIMS2-208ENST00000410011 NCBP2LA6PVI3 153 aaKnown RBP12.98□□□□□ -0.33
LIMS2-208ENST00000410011 H0Y8G0 127 aa12.98□□□□□ -0.33
LIMS2-208ENST00000410011 HBDP02042 147 aa12.98□□□□□ -0.33
LIMS2-208ENST00000410011 A0A087X0K7 114 aa12.97□□□□□ -0.33
LIMS2-208ENST00000410011 IGHV7-81A0A0B4J1V7 117 aa12.97□□□□□ -0.33
LIMS2-208ENST00000410011 PPBPP02775 128 aa12.97□□□□□ -0.33
LIMS2-208ENST00000410011 LOXL1Q08397 574 aaPredicted RBP12.97□□□□□ -0.33
LIMS2-208ENST00000410011 VAMP3Q15836 100 aa12.97□□□□□ -0.33
LIMS2-208ENST00000410011 DYNAPQ8N1N2 210 aa12.97□□□□□ -0.33
LIMS2-208ENST00000410011 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
LIMS2-208ENST00000410011 OR4C5Q8NGB2 326 aa12.97□□□□□ -0.33
LIMS2-208ENST00000410011 RBAKDNA6NC62 111 aa12.97□□□□□ -0.33
LIMS2-208ENST00000410011 OR2T8A6NH00 312 aa12.97□□□□□ -0.33
LIMS2-208ENST00000410011 CCL21O00585 134 aa12.97□□□□□ -0.33
LIMS2-208ENST00000410011 LY6HO94772 140 aa12.97□□□□□ -0.33
LIMS2-208ENST00000410011 FGF6P10767 208 aa12.97□□□□□ -0.33
LIMS2-208ENST00000410011 SEC11AP67812 179 aa12.97□□□□□ -0.33
LIMS2-208ENST00000410011 ZZEF1O43149 2961 aa12.97□□□□□ -0.33
LIMS2-208ENST00000410011 TMSB15BA0A087X1C1 80 aa12.96□□□□□ -0.33
LIMS2-208ENST00000410011 CKS2P33552 79 aa12.96□□□□□ -0.33
LIMS2-208ENST00000410011 PSMG4Q5JS54 123 aa12.96□□□□□ -0.33
LIMS2-208ENST00000410011 ATMQ13315 3056 aa12.96□□□□□ -0.33
LIMS2-208ENST00000410011 LOC389332A0A1B0GUA5 103 aa12.96□□□□□ -0.34
LIMS2-208ENST00000410011 FABP5P3A8MUU1 101 aa12.96□□□□□ -0.34
LIMS2-208ENST00000410011 SIVA1O15304 175 aa12.96□□□□□ -0.34
LIMS2-208ENST00000410011 TMEM11P17152 192 aa12.96□□□□□ -0.34
LIMS2-208ENST00000410011 ZNF80P51504 273 aaPredicted RBP12.96□□□□□ -0.34
LIMS2-208ENST00000410011 VGLL1Q99990 258 aa12.96□□□□□ -0.34
LIMS2-208ENST00000410011 MSRB2Q9Y3D2 182 aa12.96□□□□□ -0.34
LIMS2-208ENST00000410011 TWIST1Q15672 202 aa12.95□□□□□ -0.34
LIMS2-208ENST00000410011 BOD1L2Q8IYS8 172 aa12.95□□□□□ -0.34
LIMS2-208ENST00000410011 Q8N9W7 124 aa12.95□□□□□ -0.34
LIMS2-208ENST00000410011 FAM110DQ8TAY7 271 aaPredicted RBP12.95□□□□□ -0.34
LIMS2-208ENST00000410011 RNASE8Q8TDE3 154 aaKnown RBP12.95□□□□□ -0.34
LIMS2-208ENST00000410011 TIMM8BQ9Y5J9 83 aaPredicted RBP12.95□□□□□ -0.34
LIMS2-208ENST00000410011 RBX1P62877 108 aa12.95□□□□□ -0.34
LIMS2-208ENST00000410011 DTX2Q86UW9 622 aa12.95□□□□□ -0.34
LIMS2-208ENST00000410011 OR8A1Q8NGG7 326 aa12.95□□□□□ -0.34
LIMS2-208ENST00000410011 ZNF502Q8TBZ5 544 aa12.95□□□□□ -0.34
LIMS2-208ENST00000410011 PIFOQ8TCI5 191 aa12.95□□□□□ -0.34
LIMS2-208ENST00000410011 KALRNO60229 2985 aa12.94□□□□□ -0.34
LIMS2-208ENST00000410011 LINC01559Q495D7 138 aa12.94□□□□□ -0.34
LIMS2-208ENST00000410011 NPYP01303 97 aa12.94□□□□□ -0.34
LIMS2-208ENST00000410011 ADORA2A-AS1P86434 159 aa12.94□□□□□ -0.34
LIMS2-208ENST00000410011 FOXC1Q12948 553 aa12.94□□□□□ -0.34
LIMS2-208ENST00000410011 TMEM97Q5BJF2 176 aa12.94□□□□□ -0.34
LIMS2-208ENST00000410011 IFI27L1Q96BM0 104 aa12.94□□□□□ -0.34
LIMS2-208ENST00000410011 RNF185Q96GF1 192 aa12.94□□□□□ -0.34
LIMS2-208ENST00000410011 SIRPDQ9H106 197 aa12.94□□□□□ -0.34
LIMS2-208ENST00000410011 TPRP12270 2363 aaKnown RBP12.93□□□□□ -0.34
LIMS2-208ENST00000410011 A0A1W2PRD5 423 aa12.93□□□□□ -0.34
LIMS2-208ENST00000410011 A0A1W2PRF3 423 aa12.93□□□□□ -0.34
LIMS2-208ENST00000410011 A0A1W2PRM7 423 aa12.93□□□□□ -0.34
LIMS2-208ENST00000410011 BUB3O43684 328 aa12.93□□□□□ -0.34
LIMS2-208ENST00000410011 PRB4P10163 310 aaPredicted RBP12.93□□□□□ -0.34
LIMS2-208ENST00000410011 ANKRD39Q53RE8 183 aa12.93□□□□□ -0.34
LIMS2-208ENST00000410011 OR9G4Q8NGQ1 327 aa12.93□□□□□ -0.34
LIMS2-208ENST00000410011 PEF1Q9UBV8 284 aaKnown RBP12.93□□□□□ -0.34
LIMS2-208ENST00000410011 ANKHD1Q8IWZ3 2542 aaKnown RBP12.93□□□□□ -0.34
LIMS2-208ENST00000410011 IGHV3-23P01764 117 aa12.93□□□□□ -0.34
LIMS2-208ENST00000410011 NHLH1Q02575 133 aa12.93□□□□□ -0.34
LIMS2-208ENST00000410011 Q8TAT8 98 aa12.93□□□□□ -0.34
LIMS2-208ENST00000410011 SLC50A1Q9BRV3 221 aa12.93□□□□□ -0.34
LIMS2-208ENST00000410011 ZFAND3Q9H8U3 227 aa12.93□□□□□ -0.34
LIMS2-208ENST00000410011 DMXL2Q8TDJ6 3036 aa12.93□□□□□ -0.34
LIMS2-208ENST00000410011 CDKN1BP46527 198 aa12.92□□□□□ -0.34
LIMS2-208ENST00000410011 ARHGAP32A7KAX9 2087 aa12.92□□□□□ -0.34
LIMS2-208ENST00000410011 CDSNQ15517 529 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms