RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PSCAO43653 123 aa11.22□□□□□ -0.61
CHMP3-203ENST00000409225 ATP6V1G2O95670 118 aa11.22□□□□□ -0.61
CHMP3-203ENST00000409225 MRPS10P82664 201 aaKnown RBP11.22□□□□□ -0.61
CHMP3-203ENST00000409225 MRPL23Q16540 153 aaKnown RBP11.22□□□□□ -0.61
CHMP3-203ENST00000409225 PATE2Q6UY27 113 aa11.22□□□□□ -0.61
CHMP3-203ENST00000409225 NEGR1Q7Z3B1 354 aa11.22□□□□□ -0.61
CHMP3-203ENST00000409225 S100A7AQ86SG5 101 aa11.22□□□□□ -0.61
CHMP3-203ENST00000409225 LINC00528Q8N1L1 170 aa11.22□□□□□ -0.61
CHMP3-203ENST00000409225 FAT3Q8TDW7 4589 aa11.22□□□□□ -0.61
CHMP3-203ENST00000409225 C8orf49Q96NF6 230 aa11.22□□□□□ -0.61
CHMP3-203ENST00000409225 MIXL1Q9H2W2 232 aa11.22□□□□□ -0.61
CHMP3-203ENST00000409225 PRO0255Q9UI72 69 aa11.22□□□□□ -0.61
CHMP3-203ENST00000409225 SCP2D1Q9UJQ7 156 aa11.22□□□□□ -0.61
CHMP3-203ENST00000409225 PLA2G2DQ9UNK4 145 aa11.22□□□□□ -0.61
CHMP3-203ENST00000409225 STRAPQ9Y3F4 350 aaKnown RBP11.22□□□□□ -0.61
CHMP3-203ENST00000409225 KLF12Q9Y4X4 402 aa11.22□□□□□ -0.61
CHMP3-203ENST00000409225 DUXBA0A1W2PPF3 345 aa11.21□□□□□ -0.61
CHMP3-203ENST00000409225 SPINK4O60575 86 aa11.21□□□□□ -0.61
CHMP3-203ENST00000409225 PRAF2O60831 178 aa11.21□□□□□ -0.61
CHMP3-203ENST00000409225 CRYBA4P53673 196 aa11.21□□□□□ -0.61
CHMP3-203ENST00000409225 SELENOTP62341 195 aa11.21□□□□□ -0.61
CHMP3-203ENST00000409225 TEPPQ6URK8 271 aa11.21□□□□□ -0.61
CHMP3-203ENST00000409225 ST6GAL2Q96JF0 529 aa11.21□□□□□ -0.61
CHMP3-203ENST00000409225 ARV1Q9H2C2 271 aa11.21□□□□□ -0.61
CHMP3-203ENST00000409225 MCUBQ9NWR8 336 aa11.21□□□□□ -0.61
CHMP3-203ENST00000409225 LRCOL1A6NCL2 159 aa11.2□□□□□ -0.62
CHMP3-203ENST00000409225 K7EP13 123 aa11.2□□□□□ -0.62
CHMP3-203ENST00000409225 CRYGDP07320 174 aa11.2□□□□□ -0.62
CHMP3-203ENST00000409225 SLC25A6P12236 298 aa11.2□□□□□ -0.62
CHMP3-203ENST00000409225 ZBTB8BQ8NAP8 495 aaPredicted RBP11.2□□□□□ -0.62
CHMP3-203ENST00000409225 ODF3Q96PU9 254 aa11.2□□□□□ -0.62
CHMP3-203ENST00000409225 HHLA3Q9XRX5 114 aa11.2□□□□□ -0.62
CHMP3-203ENST00000409225 PIGBOS1A0A0B4J2F0 54 aa11.19□□□□□ -0.62
CHMP3-203ENST00000409225 RGS5O15539 181 aa11.19□□□□□ -0.62
CHMP3-203ENST00000409225 RRAS2P62070 204 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-203ENST00000409225 EIF4E3Q8N5X7 224 aaKnown RBP11.19□□□□□ -0.62
CHMP3-203ENST00000409225 MRPL16Q9NX20 251 aaKnown RBP11.19□□□□□ -0.62
CHMP3-203ENST00000409225 RNF24Q9Y225 148 aa11.19□□□□□ -0.62
CHMP3-203ENST00000409225 ANKRD20A5PA0PJZ0 165 aa11.18□□□□□ -0.62
CHMP3-203ENST00000409225 C7orf71A4D174 169 aa11.18□□□□□ -0.62
CHMP3-203ENST00000409225 E5RGE8 158 aa11.18□□□□□ -0.62
CHMP3-203ENST00000409225 TCL1AP56279 114 aa11.18□□□□□ -0.62
CHMP3-203ENST00000409225 SLAQ13239 276 aa11.18□□□□□ -0.62
CHMP3-203ENST00000409225 FHL2Q14192 279 aa11.18□□□□□ -0.62
CHMP3-203ENST00000409225 LINC00305Q7Z4B0 112 aa11.18□□□□□ -0.62
CHMP3-203ENST00000409225 BPIFA4PQ86YQ2 179 aa11.18□□□□□ -0.62
CHMP3-203ENST00000409225 Q8N814 137 aa11.18□□□□□ -0.62
CHMP3-203ENST00000409225 PXMP4Q9Y6I8 212 aa11.18□□□□□ -0.62
CHMP3-203ENST00000409225 SLC25A5P05141 298 aaKnown RBP11.17□□□□□ -0.62
CHMP3-203ENST00000409225 SRIP30626 198 aa11.17□□□□□ -0.62
CHMP3-203ENST00000409225 SLC38A11Q08AI6 406 aa11.17□□□□□ -0.62
CHMP3-203ENST00000409225 BTN1A1Q13410 526 aa11.17□□□□□ -0.62
CHMP3-203ENST00000409225 IL18Q14116 193 aa11.17□□□□□ -0.62
CHMP3-203ENST00000409225 ANXA2RQ3ZCQ2 193 aa11.17□□□□□ -0.62
CHMP3-203ENST00000409225 C10orf126Q8N4M7 172 aa11.17□□□□□ -0.62
CHMP3-203ENST00000409225 VGLL1Q99990 258 aa11.17□□□□□ -0.62
CHMP3-203ENST00000409225 NAA50Q9GZZ1 169 aaKnown RBP11.17□□□□□ -0.62
CHMP3-203ENST00000409225 RABL2BQ9UNT1 228 aa11.17□□□□□ -0.62
CHMP3-203ENST00000409225 K7EQD1 137 aa11.16□□□□□ -0.62
CHMP3-203ENST00000409225 CTDSP2O14595 271 aa11.16□□□□□ -0.62
CHMP3-203ENST00000409225 CCNKO75909 580 aa11.16□□□□□ -0.62
CHMP3-203ENST00000409225 HOXB5P09067 269 aa11.16□□□□□ -0.62
CHMP3-203ENST00000409225 VAMP1P23763 118 aa11.16□□□□□ -0.62
CHMP3-203ENST00000409225 CD300CQ08708 224 aa11.16□□□□□ -0.62
CHMP3-203ENST00000409225 ZNF415Q09FC8 603 aa11.16□□□□□ -0.62
CHMP3-203ENST00000409225 ERCC8Q13216 396 aa11.16□□□□□ -0.62
CHMP3-203ENST00000409225 LRTM2Q8N967 370 aa11.16□□□□□ -0.62
CHMP3-203ENST00000409225 TP53TG3Q9ULZ0 132 aa11.16□□□□□ -0.62
CHMP3-203ENST00000409225 H3BQ15 152 aa11.15□□□□□ -0.62
CHMP3-203ENST00000409225 CTDSPLO15194 276 aa11.15□□□□□ -0.62
CHMP3-203ENST00000409225 C1QBP02746 253 aa11.15□□□□□ -0.62
CHMP3-203ENST00000409225 RNASE4P34096 147 aaKnown RBP11.15□□□□□ -0.62
CHMP3-203ENST00000409225 MORN5Q5VZ52 161 aa11.15□□□□□ -0.62
CHMP3-203ENST00000409225 PCNPQ8WW12 178 aaKnown RBP11.15□□□□□ -0.62
CHMP3-203ENST00000409225 SAT2Q96F10 170 aaPredicted RBP11.15□□□□□ -0.62
CHMP3-203ENST00000409225 PSENENQ9NZ42 101 aa11.15□□□□□ -0.62
CHMP3-203ENST00000409225 RCL1Q9Y2P8 373 aaKnown RBP11.15□□□□□ -0.62
CHMP3-203ENST00000409225 TRGV4A0A0C4DH28 118 aa11.14□□□□□ -0.63
CHMP3-203ENST00000409225 IGLC2P0DOY2 106 aa11.14□□□□□ -0.63
CHMP3-203ENST00000409225 GYPEP15421 78 aa11.14□□□□□ -0.63
CHMP3-203ENST00000409225 POLR2GP62487 172 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHMP3-203ENST00000409225 OPCMLQ14982 345 aa11.14□□□□□ -0.63
CHMP3-203ENST00000409225 CTF1Q16619 201 aa11.14□□□□□ -0.63
CHMP3-203ENST00000409225 TMEM128Q5BJH2 165 aa11.14□□□□□ -0.63
CHMP3-203ENST00000409225 PXDC1Q5TGL8 231 aa11.14□□□□□ -0.63
CHMP3-203ENST00000409225 MRPL32Q9BYC8 188 aaKnown RBP11.14□□□□□ -0.63
CHMP3-203ENST00000409225 NPVFQ9HCQ7 196 aa11.14□□□□□ -0.63
CHMP3-203ENST00000409225 KLLNB2CW77 178 aa11.13□□□□□ -0.63
CHMP3-203ENST00000409225 K7EPK0 472 aa11.13□□□□□ -0.63
CHMP3-203ENST00000409225 GOSR2O14653 212 aa11.13□□□□□ -0.63
CHMP3-203ENST00000409225 COX7A2P2O60397 106 aa11.13□□□□□ -0.63
CHMP3-203ENST00000409225 MPDU1O75352 247 aa11.13□□□□□ -0.63
CHMP3-203ENST00000409225 IBA57Q5T440 356 aaKnown RBP11.13□□□□□ -0.63
CHMP3-203ENST00000409225 DIRAS2Q96HU8 199 aa11.13□□□□□ -0.63
CHMP3-203ENST00000409225 Q9HAA7 133 aa11.13□□□□□ -0.63
CHMP3-203ENST00000409225 CCDC59Q9P031 241 aaKnown RBP11.13□□□□□ -0.63
CHMP3-203ENST00000409225 RGS13O14921 159 aa11.12□□□□□ -0.63
CHMP3-203ENST00000409225 OXTP01178 125 aa11.12□□□□□ -0.63
CHMP3-203ENST00000409225 OR4E1P0C645 316 aa11.12□□□□□ -0.63
CHMP3-203ENST00000409225 SFTA3P0C7M3 94 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms