RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 OR5G3P0C626 314 aa7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 AKAIN1P0CW23 69 aa7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 RAP2BP61225 183 aa7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 SPANXN5Q5MJ07 72 aa7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 CLVS1Q8IUQ0 354 aaPredicted RBP7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 LRRC20Q8TCA0 184 aa7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 SMIM4Q8WVI0 70 aa7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 SAT2Q96F10 170 aaPredicted RBP7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 ST6GAL2Q96JF0 529 aa7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 PYGO2Q9BRQ0 406 aa7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 Q9H521 79 aa7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 SYNGR2O43760 224 aa7.92□□□□□ -1.14
SPTLC1P3-201ENST00000403408 SSBP1Q04837 148 aaKnown RBP7.92□□□□□ -1.14
SPTLC1P3-201ENST00000403408 CD300CQ08708 224 aa7.92□□□□□ -1.14
SPTLC1P3-201ENST00000403408 ERCC8Q13216 396 aa7.92□□□□□ -1.14
SPTLC1P3-201ENST00000403408 BTN1A1Q13410 526 aa7.92□□□□□ -1.14
SPTLC1P3-201ENST00000403408 CTF1Q16619 201 aa7.92□□□□□ -1.14
SPTLC1P3-201ENST00000403408 MZT2AQ6P582 158 aa7.92□□□□□ -1.14
SPTLC1P3-201ENST00000403408 Q8N814 137 aa7.92□□□□□ -1.14
SPTLC1P3-201ENST00000403408 SYT8Q8NBV8 401 aa7.92□□□□□ -1.14
SPTLC1P3-201ENST00000403408 DEFB104AQ8WTQ1 72 aa7.92□□□□□ -1.14
SPTLC1P3-201ENST00000403408 ARL6Q9H0F7 186 aa7.92□□□□□ -1.14
SPTLC1P3-201ENST00000403408 ARV1Q9H2C2 271 aa7.92□□□□□ -1.14
SPTLC1P3-201ENST00000403408 MRPL16Q9NX20 251 aaKnown RBP7.92□□□□□ -1.14
SPTLC1P3-201ENST00000403408 ANKRD20A5PA0PJZ0 165 aa7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 K7EQD1 137 aa7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 PLA2G1BP04054 148 aaKnown RBP7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 IGLC2P0DOY2 106 aa7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 CXCL2P19875 107 aa7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 TCL1AP56279 114 aa7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 ANXA2RQ3ZCQ2 193 aa7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 PRR9Q5T870 116 aa7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 LCN15Q6UWW0 184 aa7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 NTN5Q8WTR8 489 aaPredicted RBP7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 TMEM37Q8WXS4 190 aa7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 FAM19A4Q96LR4 140 aa7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 ODF3Q96PU9 254 aa7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 PRRT1Q99946 306 aa7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 PRO0255Q9UI72 69 aa7.91□□□□□ -1.14
SPTLC1P3-201ENST00000403408 SMCO3A2RU48 225 aa7.9□□□□□ -1.14
SPTLC1P3-201ENST00000403408 C7orf71A4D174 169 aa7.9□□□□□ -1.14
SPTLC1P3-201ENST00000403408 KLLNB2CW77 178 aa7.9□□□□□ -1.14
SPTLC1P3-201ENST00000403408 CRYGDP07320 174 aa7.9□□□□□ -1.14
SPTLC1P3-201ENST00000403408 SLC25A6P12236 298 aa7.9□□□□□ -1.14
SPTLC1P3-201ENST00000403408 ANXA7P20073 488 aaKnown RBP7.9□□□□□ -1.14
SPTLC1P3-201ENST00000403408 SLC38A11Q08AI6 406 aa7.9□□□□□ -1.14
SPTLC1P3-201ENST00000403408 MRPL23Q16540 153 aaKnown RBP7.9□□□□□ -1.14
SPTLC1P3-201ENST00000403408 NEGR1Q7Z3B1 354 aa7.9□□□□□ -1.14
SPTLC1P3-201ENST00000403408 LRTM2Q8N967 370 aa7.9□□□□□ -1.14
SPTLC1P3-201ENST00000403408 HHLA3Q9XRX5 114 aa7.9□□□□□ -1.14
SPTLC1P3-201ENST00000403408 TRAV9-2A0A087WT02 112 aa7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 A0A087WXM4 84 aa7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 TRAV5A0A0B4J249 113 aa7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 E5RGE8 158 aa7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 K7EPK0 472 aa7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 C1QBP02746 253 aa7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 SFTA3P0C7M3 94 aa7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 LEPP41159 167 aa7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 RRAS2P62070 204 aaPredicted RBP7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 OPCMLQ14982 345 aa7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 LINC00305Q7Z4B0 112 aa7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 ZNF680Q8NEM1 530 aa7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 CIB3Q96Q77 187 aaPredicted RBP7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 SLC50A1Q9BRV3 221 aa7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 RABL2BQ9UNT1 228 aa7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 STRAPQ9Y3F4 350 aaKnown RBP7.89□□□□□ -1.15
SPTLC1P3-201ENST00000403408 DUXBA0A1W2PPF3 345 aa7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 M0R3E3 92 aa7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 CTDSPLO15194 276 aa7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 MED6O75586 246 aa7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 EVI2AP22794 236 aa7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 S100A7P31151 101 aa7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 POLR2GP62487 172 aaKnown RBP eCLIP7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 SRPXP78539 464 aa7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 ARL16Q0P5N6 197 aa7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 LINC01620Q4KN68 170 aa7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 EIF4E3Q8N5X7 224 aaKnown RBP7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 C15orf40Q8WUR7 153 aa7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 ZNF479Q96JC4 524 aa7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 VGLL1Q99990 258 aa7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 MRPL32Q9BYC8 188 aaKnown RBP7.88□□□□□ -1.15
SPTLC1P3-201ENST00000403408 LOC100131303A0A0U1RQF7 123 aa7.87□□□□□ -1.15
SPTLC1P3-201ENST00000403408 SLC25A5P05141 298 aaKnown RBP7.87□□□□□ -1.15
SPTLC1P3-201ENST00000403408 HOXB5P09067 269 aa7.87□□□□□ -1.15
SPTLC1P3-201ENST00000403408 SELENOTP62341 195 aa7.87□□□□□ -1.15
SPTLC1P3-201ENST00000403408 MRPS10P82664 201 aaKnown RBP7.87□□□□□ -1.15
SPTLC1P3-201ENST00000403408 ID3Q02535 119 aa7.87□□□□□ -1.15
SPTLC1P3-201ENST00000403408 C4orf46Q504U0 113 aa7.87□□□□□ -1.15
SPTLC1P3-201ENST00000403408 SCXQ7RTU7 201 aa7.87□□□□□ -1.15
SPTLC1P3-201ENST00000403408 ZFAND2AQ8N6M9 145 aa7.87□□□□□ -1.15
SPTLC1P3-201ENST00000403408 AP3S1Q92572 193 aa7.87□□□□□ -1.15
SPTLC1P3-201ENST00000403408 AGPAT4-IT1Q9H0P7 198 aa7.87□□□□□ -1.15
SPTLC1P3-201ENST00000403408 RCL1Q9Y2P8 373 aaKnown RBP7.87□□□□□ -1.15
SPTLC1P3-201ENST00000403408 K7EP13 123 aa7.86□□□□□ -1.15
SPTLC1P3-201ENST00000403408 OXTP01178 125 aa7.86□□□□□ -1.15
SPTLC1P3-201ENST00000403408 ANXA3P12429 323 aa7.86□□□□□ -1.15
SPTLC1P3-201ENST00000403408 GYPEP15421 78 aa7.86□□□□□ -1.15
SPTLC1P3-201ENST00000403408 RNASE4P34096 147 aaKnown RBP7.86□□□□□ -1.15
SPTLC1P3-201ENST00000403408 HNRNPA3P51991 378 aaKnown RBP7.86□□□□□ -1.15
SPTLC1P3-201ENST00000403408 RPP30P78346 268 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms