RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 RHPN1-AS1Q9BWJ2 59 aa11.26□□□□□ -0.61
RERE-204ENST00000400908 CYTL1Q9NRR1 136 aa11.26□□□□□ -0.61
RERE-204ENST00000400908 ATOX1O00244 68 aa11.25□□□□□ -0.61
RERE-204ENST00000400908 RNASE2P10153 161 aaKnown RBP11.25□□□□□ -0.61
RERE-204ENST00000400908 COX8AP10176 69 aa11.25□□□□□ -0.61
RERE-204ENST00000400908 TMEM219Q86XT9 240 aa11.25□□□□□ -0.61
RERE-204ENST00000400908 FAM223BA6NKX1 122 aa11.25□□□□□ -0.61
RERE-204ENST00000400908 OOSP1A8MZH6 123 aa11.25□□□□□ -0.61
RERE-204ENST00000400908 TFF1P04155 84 aa11.25□□□□□ -0.61
RERE-204ENST00000400908 BVES-AS1Q5T3Y7 98 aa11.25□□□□□ -0.61
RERE-204ENST00000400908 FAM223AQ8IWN6 122 aa11.25□□□□□ -0.61
RERE-204ENST00000400908 DEFB105AQ8NG35 78 aa11.25□□□□□ -0.61
RERE-204ENST00000400908 LYPD3O95274 346 aa11.25□□□□□ -0.61
RERE-204ENST00000400908 ARHGEF17Q96PE2 2063 aaPredicted RBP11.25□□□□□ -0.61
RERE-204ENST00000400908 BAALC-AS2P0C853 105 aa11.24□□□□□ -0.61
RERE-204ENST00000400908 PSMB8P28062 276 aa11.24□□□□□ -0.61
RERE-204ENST00000400908 VMO1Q7Z5L0 202 aa11.24□□□□□ -0.61
RERE-204ENST00000400908 IGHV1-3A0A0C4DH29 117 aa11.24□□□□□ -0.61
RERE-204ENST00000400908 DSCR9P59020 149 aa11.24□□□□□ -0.61
RERE-204ENST00000400908 MINOS1Q5TGZ0 78 aa11.24□□□□□ -0.61
RERE-204ENST00000400908 MINOS1-NBL1R4GNA1 71 aa11.24□□□□□ -0.61
RERE-204ENST00000400908 DKK1O94907 266 aa11.24□□□□□ -0.61
RERE-204ENST00000400908 HGFACQ04756 655 aa11.24□□□□□ -0.61
RERE-204ENST00000400908 TCF20Q9UGU0 1960 aaKnown RBP11.24□□□□□ -0.61
RERE-204ENST00000400908 HEATR5BQ9P2D3 2071 aa11.24□□□□□ -0.61
RERE-204ENST00000400908 IGKV1-5P01602 117 aa11.24□□□□□ -0.61
RERE-204ENST00000400908 KLHL30-AS1Q8NEE0 82 aa11.24□□□□□ -0.61
RERE-204ENST00000400908 TEX48A0A1B0GUV7 120 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 PRSS46E5RG02 174 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 LYNX1G3V0Z9 82 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 LYNX1P0DP58 116 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 TMEM14EPQ6UXP3 125 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 MESP1Q9BRJ9 268 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 C18orf32Q8TCD1 76 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 TMEM213A2RRL7 107 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 HLA-DRB4P13762 266 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 MUSTN1Q8IVN3 82 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 SPTSSBQ8NFR3 76 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 HLA-DRB4X5D2U9 266 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 MYLKQ15746 1914 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 TRAV12-2A0A075B6T6 113 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 HERVK_113P63121 156 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 CSRP2Q16527 193 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 LGALS9BQ3B8N2 356 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 LGALS9CQ6DKI2 356 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 ZNF492Q9P255 531 aa11.23□□□□□ -0.61
RERE-204ENST00000400908 C9orf106Q8NAJ2 232 aa11.22□□□□□ -0.61
RERE-204ENST00000400908 IGHV3-16A0A0C4DH30 117 aa11.22□□□□□ -0.61
RERE-204ENST00000400908 CFHR2P36980 270 aa11.22□□□□□ -0.61
RERE-204ENST00000400908 CFHR3Q02985 330 aa11.22□□□□□ -0.61
RERE-204ENST00000400908 PDE6HQ13956 83 aa11.22□□□□□ -0.61
RERE-204ENST00000400908 DEFB131AP59861 70 aa11.22□□□□□ -0.61
RERE-204ENST00000400908 DAZ1Q9NQZ3 744 aaKnown RBP11.22□□□□□ -0.61
RERE-204ENST00000400908 K7ERJ3 54 aa11.22□□□□□ -0.61
RERE-204ENST00000400908 IGHV1-8P0DP01 117 aa11.22□□□□□ -0.61
RERE-204ENST00000400908 CFPP27918 469 aa11.22□□□□□ -0.61
RERE-204ENST00000400908 VWC2Q2TAL6 325 aa11.22□□□□□ -0.61
RERE-204ENST00000400908 ZNF837Q96EG3 531 aaPredicted RBP11.22□□□□□ -0.61
RERE-204ENST00000400908 ALPK2Q86TB3 2170 aa11.21□□□□□ -0.61
RERE-204ENST00000400908 SDHAF1A6NFY7 115 aa11.21□□□□□ -0.61
RERE-204ENST00000400908 TMEM75Q8N9X5 138 aa11.21□□□□□ -0.61
RERE-204ENST00000400908 IGFBPL1Q8WX77 278 aa11.21□□□□□ -0.61
RERE-204ENST00000400908 LYZL4Q96KX0 146 aa11.21□□□□□ -0.61
RERE-204ENST00000400908 RNF114Q9Y508 228 aa11.21□□□□□ -0.61
RERE-204ENST00000400908 PROP1O75360 226 aa11.21□□□□□ -0.61
RERE-204ENST00000400908 FOXF2Q12947 444 aa11.21□□□□□ -0.61
RERE-204ENST00000400908 C5orf64Q2M2E5 130 aa11.21□□□□□ -0.61
RERE-204ENST00000400908 IGKV1-9A0A0C4DH69 117 aa11.21□□□□□ -0.62
RERE-204ENST00000400908 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.21□□□□□ -0.62
RERE-204ENST00000400908 NTN3O00634 580 aaPredicted RBP11.21□□□□□ -0.62
RERE-204ENST00000400908 NPYP01303 97 aa11.21□□□□□ -0.62
RERE-204ENST00000400908 FAM186AA6NE01 2351 aa11.21□□□□□ -0.62
RERE-204ENST00000400908 IGKV1D-8A0A087WSZ0 117 aa11.2□□□□□ -0.62
RERE-204ENST00000400908 IGHV4-28A0A0C4DH34 117 aa11.2□□□□□ -0.62
RERE-204ENST00000400908 J3QQQ9 107 aa11.2□□□□□ -0.62
RERE-204ENST00000400908 AMTNQ6UX39 209 aa11.2□□□□□ -0.62
RERE-204ENST00000400908 C17orf82Q86X59 251 aaPredicted RBP11.2□□□□□ -0.62
RERE-204ENST00000400908 ZNRF2Q8NHG8 242 aa11.2□□□□□ -0.62
RERE-204ENST00000400908 CFHR4Q92496 578 aa11.2□□□□□ -0.62
RERE-204ENST00000400908 MRPS18CQ9Y3D5 142 aaKnown RBP11.2□□□□□ -0.62
RERE-204ENST00000400908 H3BUX3 64 aa11.2□□□□□ -0.62
RERE-204ENST00000400908 PFN1P07737 140 aaKnown RBP11.2□□□□□ -0.62
RERE-204ENST00000400908 NTF4P34130 210 aa11.2□□□□□ -0.62
RERE-204ENST00000400908 IGHV1-46P01743 117 aa11.2□□□□□ -0.62
RERE-204ENST00000400908 ZCCHC24Q8N2G6 241 aaKnown RBP11.2□□□□□ -0.62
RERE-204ENST00000400908 TANC1Q9C0D5 1861 aa11.2□□□□□ -0.62
RERE-204ENST00000400908 CFC1BP0CG36 223 aa11.2□□□□□ -0.62
RERE-204ENST00000400908 CFC1P0CG37 223 aa11.2□□□□□ -0.62
RERE-204ENST00000400908 ZFP36L1Q07352 338 aaKnown RBP11.2□□□□□ -0.62
RERE-204ENST00000400908 SHANK2-AS3Q9BTD1 123 aa11.2□□□□□ -0.62
RERE-204ENST00000400908 A0A0A6YYD4 124 aa11.19□□□□□ -0.62
RERE-204ENST00000400908 C12orf74Q32Q52 190 aa11.19□□□□□ -0.62
RERE-204ENST00000400908 FRMPD3Q5JV73 1810 aa11.19□□□□□ -0.62
RERE-204ENST00000400908 TRAV3A0A0B4J244 114 aa11.19□□□□□ -0.62
RERE-204ENST00000400908 SIVA1O15304 175 aa11.19□□□□□ -0.62
RERE-204ENST00000400908 NMSQ5H8A3 153 aa11.19□□□□□ -0.62
RERE-204ENST00000400908 TMEM200BQ69YZ2 307 aa11.19□□□□□ -0.62
RERE-204ENST00000400908 REG4Q9BYZ8 158 aa11.19□□□□□ -0.62
RERE-204ENST00000400908 XCL2Q9UBD3 114 aa11.19□□□□□ -0.62
RERE-204ENST00000400908 FNDC10F2Z333 226 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms