RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 OR11H2Q8NH07 326 aa11.41□□□□□ -0.58
GABPA-202ENST00000400075 CYSLTR1Q9Y271 337 aa11.41□□□□□ -0.58
GABPA-202ENST00000400075 RPP25LQ8N5L8 163 aaKnown RBP11.41□□□□□ -0.58
GABPA-202ENST00000400075 SMPXQ9UHP9 88 aa11.41□□□□□ -0.58
GABPA-202ENST00000400075 GAGE12BA1L429 117 aa11.41□□□□□ -0.58
GABPA-202ENST00000400075 GAGE7O76087 117 aa11.41□□□□□ -0.58
GABPA-202ENST00000400075 LY6G6DO95868 133 aa11.41□□□□□ -0.58
GABPA-202ENST00000400075 GAGE12FP0CL80 117 aa11.41□□□□□ -0.58
GABPA-202ENST00000400075 GAGE12GP0CL81 117 aa11.41□□□□□ -0.58
GABPA-202ENST00000400075 GAGE12IP0CL82 117 aa11.41□□□□□ -0.58
GABPA-202ENST00000400075 PKD1L2Q7Z442 2459 aa11.4□□□□□ -0.58
GABPA-202ENST00000400075 TMEM238LA0A1B0GVL6 79 aa11.4□□□□□ -0.58
GABPA-202ENST00000400075 A6NJY4 79 aa11.4□□□□□ -0.58
GABPA-202ENST00000400075 AGMATQ9BSE5 352 aa11.4□□□□□ -0.58
GABPA-202ENST00000400075 CEP192Q8TEP8 1941 aa11.4□□□□□ -0.58
GABPA-202ENST00000400075 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.4□□□□□ -0.58
GABPA-202ENST00000400075 SPAG8Q99932 426 aaPredicted RBP11.4□□□□□ -0.58
GABPA-202ENST00000400075 OSTCQ9NRP0 149 aa11.4□□□□□ -0.58
GABPA-202ENST00000400075 TMEM160Q9NX00 188 aa11.4□□□□□ -0.58
GABPA-202ENST00000400075 SMAD5-AS1Q9Y6J3 95 aa11.4□□□□□ -0.58
GABPA-202ENST00000400075 TRAV8-1A0A0A6YYK1 113 aa11.4□□□□□ -0.58
GABPA-202ENST00000400075 H7C2G1 150 aa11.4□□□□□ -0.58
GABPA-202ENST00000400075 VSIRQ9H7M9 311 aa11.4□□□□□ -0.58
GABPA-202ENST00000400075 RNASE1P07998 156 aaKnown RBP11.39□□□□□ -0.59
GABPA-202ENST00000400075 CDKN1BP46527 198 aa11.39□□□□□ -0.59
GABPA-202ENST00000400075 MSMPQ1L6U9 139 aa11.39□□□□□ -0.59
GABPA-202ENST00000400075 PUSL1Q8N0Z8 303 aaKnown RBP11.39□□□□□ -0.59
GABPA-202ENST00000400075 CD28P10747 220 aa11.39□□□□□ -0.59
GABPA-202ENST00000400075 RNF182Q8N6D2 247 aa11.39□□□□□ -0.59
GABPA-202ENST00000400075 Q8NFD4 153 aa11.39□□□□□ -0.59
GABPA-202ENST00000400075 MBD3L1Q8WWY6 194 aa11.39□□□□□ -0.59
GABPA-202ENST00000400075 TRAV9-2A0A087WT02 112 aa11.39□□□□□ -0.59
GABPA-202ENST00000400075 IGHV7-81A0A0B4J1V7 117 aa11.39□□□□□ -0.59
GABPA-202ENST00000400075 IZUMO1RA6ND01 250 aa11.39□□□□□ -0.59
GABPA-202ENST00000400075 TNFRSF13BO14836 293 aaPredicted RBP11.39□□□□□ -0.59
GABPA-202ENST00000400075 RHODO00212 210 aa11.39□□□□□ -0.59
GABPA-202ENST00000400075 HOXA5P20719 270 aa11.39□□□□□ -0.59
GABPA-202ENST00000400075 CFPP27918 469 aa11.39□□□□□ -0.59
GABPA-202ENST00000400075 CITED2Q99967 270 aaPredicted RBP11.39□□□□□ -0.59
GABPA-202ENST00000400075 SHISA2Q6UWI4 295 aa11.38□□□□□ -0.59
GABPA-202ENST00000400075 OR5A1Q8NGJ0 315 aa11.38□□□□□ -0.59
GABPA-202ENST00000400075 ZNF414Q96IQ9 312 aa11.38□□□□□ -0.59
GABPA-202ENST00000400075 WFDC1Q9HC57 220 aa11.38□□□□□ -0.59
GABPA-202ENST00000400075 PAX9P55771 341 aa11.38□□□□□ -0.59
GABPA-202ENST00000400075 GUSBP1Q15486 140 aa11.38□□□□□ -0.59
GABPA-202ENST00000400075 ERCC8Q13216 396 aa11.38□□□□□ -0.59
GABPA-202ENST00000400075 SIRPDQ9H106 197 aa11.38□□□□□ -0.59
GABPA-202ENST00000400075 TGIF2-C20orf24A0A0A6YYL0 155 aa11.38□□□□□ -0.59
GABPA-202ENST00000400075 POU2AF1Q16633 256 aa11.38□□□□□ -0.59
GABPA-202ENST00000400075 OCC1Q8TAD7 63 aa11.38□□□□□ -0.59
GABPA-202ENST00000400075 ATP6V0BQ99437 205 aa11.38□□□□□ -0.59
GABPA-202ENST00000400075 OBSL1O75147 1896 aa11.37□□□□□ -0.59
GABPA-202ENST00000400075 Q8N7P7 452 aa11.37□□□□□ -0.59
GABPA-202ENST00000400075 TMEM131Q92545 1883 aa11.37□□□□□ -0.59
GABPA-202ENST00000400075 ALPK3Q96L96 1907 aa11.37□□□□□ -0.59
GABPA-202ENST00000400075 LOC102724200A0A096LPH7 203 aaPredicted RBP11.37□□□□□ -0.59
GABPA-202ENST00000400075 SRSF1Q07955 248 aaKnown RBP eCLIP11.37□□□□□ -0.59
GABPA-202ENST00000400075 ORMDL2Q53FV1 153 aa11.37□□□□□ -0.59
GABPA-202ENST00000400075 GFI1BQ5VTD9 330 aa11.37□□□□□ -0.59
GABPA-202ENST00000400075 KLK9Q9UKQ9 250 aa11.37□□□□□ -0.59
GABPA-202ENST00000400075 DMRTA1Q5VZB9 504 aa11.36□□□□□ -0.59
GABPA-202ENST00000400075 C1orf159Q96HA4 380 aa11.36□□□□□ -0.59
GABPA-202ENST00000400075 NXT2Q9NPJ8 142 aaKnown RBP11.36□□□□□ -0.59
GABPA-202ENST00000400075 PAM16Q9Y3D7 125 aa11.36□□□□□ -0.59
GABPA-202ENST00000400075 PGPEP1LA6NFU8 196 aa11.36□□□□□ -0.59
GABPA-202ENST00000400075 C14orf178Q8N769 122 aaPredicted RBP11.36□□□□□ -0.59
GABPA-202ENST00000400075 C5orf56Q8N8D9 126 aa11.36□□□□□ -0.59
GABPA-202ENST00000400075 Q8N9W7 124 aa11.36□□□□□ -0.59
GABPA-202ENST00000400075 NACAE9PAV3 2078 aa11.36□□□□□ -0.59
GABPA-202ENST00000400075 RPL23P62829 140 aaKnown RBP11.36□□□□□ -0.59
GABPA-202ENST00000400075 C22orf34Q6ZV56 151 aa11.36□□□□□ -0.59
GABPA-202ENST00000400075 CHD3Q12873 2000 aaKnown RBP11.36□□□□□ -0.59
GABPA-202ENST00000400075 IGHV1OR15-1A0A075B7D0 117 aa11.35□□□□□ -0.59
GABPA-202ENST00000400075 AZU1P20160 251 aa11.35□□□□□ -0.59
GABPA-202ENST00000400075 AJUBAQ96IF1 538 aa11.35□□□□□ -0.59
GABPA-202ENST00000400075 FGF23Q9GZV9 251 aaPredicted RBP11.35□□□□□ -0.59
GABPA-202ENST00000400075 CKS1BP61024 79 aa11.35□□□□□ -0.59
GABPA-202ENST00000400075 PLXNB3Q9ULL4 1909 aa11.35□□□□□ -0.59
GABPA-202ENST00000400075 SH2D1AO60880 128 aa11.35□□□□□ -0.59
GABPA-202ENST00000400075 TRAV12-2A0A075B6T6 113 aa11.35□□□□□ -0.59
GABPA-202ENST00000400075 ARMS2P0C7Q2 107 aa11.35□□□□□ -0.59
GABPA-202ENST00000400075 IGLC1P0CG04 106 aa11.35□□□□□ -0.59
GABPA-202ENST00000400075 GZMBP10144 247 aa11.35□□□□□ -0.59
GABPA-202ENST00000400075 INSL3P51460 131 aa11.35□□□□□ -0.59
GABPA-202ENST00000400075 SLAQ13239 276 aa11.35□□□□□ -0.59
GABPA-202ENST00000400075 TSKUQ8WUA8 353 aa11.35□□□□□ -0.59
GABPA-202ENST00000400075 FOSL1P15407 271 aa11.34□□□□□ -0.59
GABPA-202ENST00000400075 PHLDA1Q8WV24 401 aaPredicted RBP11.34□□□□□ -0.59
GABPA-202ENST00000400075 HIST1H4GQ99525 98 aa11.34□□□□□ -0.59
GABPA-202ENST00000400075 A0A087WWL8 130 aa11.34□□□□□ -0.59
GABPA-202ENST00000400075 NUDT10Q8NFP7 164 aa11.34□□□□□ -0.59
GABPA-202ENST00000400075 NPBQ8NG41 125 aa11.34□□□□□ -0.59
GABPA-202ENST00000400075 NUDT11Q96G61 164 aa11.34□□□□□ -0.59
GABPA-202ENST00000400075 A6NDN8 102 aa11.34□□□□□ -0.59
GABPA-202ENST00000400075 GAGE12JA6NER3 117 aa11.34□□□□□ -0.59
GABPA-202ENST00000400075 EVI2AP22794 236 aa11.34□□□□□ -0.59
GABPA-202ENST00000400075 GAGE1Q13065 139 aa11.34□□□□□ -0.59
GABPA-202ENST00000400075 GAGE4Q13068 117 aa11.34□□□□□ -0.59
GABPA-202ENST00000400075 GAGE5Q13069 117 aa11.34□□□□□ -0.59
GABPA-202ENST00000400075 GAGE13Q4V321 117 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms