RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 C1orf159Q96HA4 380 aa13.04□□□□□ -0.32
PCDHA12-201ENST00000398631 PLEKHB2Q96CS7 222 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 FNDC4Q9H6D8 234 aaPredicted RBP13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 TMEM238C9JI98 176 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 LINC01619G3V211 115 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 CSTL1Q9H114 145 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 MEGF9Q9H1U4 602 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 HOXA3O43365 443 aaPredicted RBP13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 DEFB130BP0DP73 79 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 DEFB130AP0DP74 79 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 RSPO1Q2MKA7 263 aaPredicted RBP13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 ARMS2P0C7Q2 107 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 S100A7L2Q5SY68 101 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 RSPO3Q9BXY4 272 aaPredicted RBP13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 ANAPC10Q9UM13 185 aa13.02□□□□□ -0.32
PCDHA12-201ENST00000398631 TRAV8-2A0A0B4J237 113 aa13.02□□□□□ -0.33
PCDHA12-201ENST00000398631 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.02□□□□□ -0.33
PCDHA12-201ENST00000398631 ERCC8Q13216 396 aa13.02□□□□□ -0.33
PCDHA12-201ENST00000398631 PRR31Q5SQ13 230 aa13.02□□□□□ -0.33
PCDHA12-201ENST00000398631 RASL10AQ92737 203 aa13.02□□□□□ -0.33
PCDHA12-201ENST00000398631 LIME1Q9H400 295 aa13.02□□□□□ -0.33
PCDHA12-201ENST00000398631 LINC00479Q96M42 142 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 JPT2Q9H910 190 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 ZNF479Q96JC4 524 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 NOTCH4Q99466 2003 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 DEFB104AQ8WTQ1 72 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 A0A087WWL8 130 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 IL17RELQ6ZVW7 336 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 KAAG1Q9UBP8 84 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 AMN1Q8IY45 258 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 MRPL27Q9P0M9 148 aaKnown RBP13□□□□□ -0.33
PCDHA12-201ENST00000398631 IGHV4-39P01824 125 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 PLXNA4Q9HCM2 1894 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 SLX1AQ9BQ83 275 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 TDGF1P3P51864 188 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 FAM90A2PQ658T7 463 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 SIGMAR1Q99720 223 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 XCL2Q9UBD3 114 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 C15orf65H3BRN8 121 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 RHODO00212 210 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 GGTLC3B5MD39 225 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 PAX4O43316 350 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 C6orf226Q5I0X4 101 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 TMEM158Q8WZ71 300 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 M0R2P5 195 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 PYY3Q5JQD4 70 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 GFRA4Q9GZZ7 299 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 ERG28Q9UKR5 140 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 SAMD5Q5TGI4 173 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 C11orf68Q9H3H3 251 aaKnown RBP12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 CST9LQ9H4G1 147 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 A8MWV9 139 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 DLEU1O43261 78 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 DMRTC2Q8IXT2 367 aaPredicted RBP12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 WDR81Q562E7 1941 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 NDUFA4O00483 81 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 TRBV19A0A075B6N1 114 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 PSCAO43653 123 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 TMEM256Q8N2U0 113 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 TMEM75Q8N9X5 138 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 PHLDA1Q8WV24 401 aaPredicted RBP12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 MMP23AO75900 390 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 SPINK13Q1W4C9 94 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 WT1P19544 449 aaPredicted RBP12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 TMEM95Q3KNT9 176 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 DKK1O94907 266 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 WT1-ASQ06250 92 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 TCTEX1D4Q5JR98 221 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 TRAV13-1A0A0B4J241 112 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 IGKV1-39P01597 117 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 IGKV1D-39P04432 117 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 GAGE13Q4V321 117 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 ZNF492Q9P255 531 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 SMKR1H3BMG3 65 aa12.96□□□□□ -0.33
PCDHA12-201ENST00000398631 PFN1P07737 140 aaKnown RBP12.96□□□□□ -0.33
PCDHA12-201ENST00000398631 PAX9P55771 341 aa12.96□□□□□ -0.33
PCDHA12-201ENST00000398631 MST1LQ2TV78 715 aa12.96□□□□□ -0.33
PCDHA12-201ENST00000398631 TRPT1Q86TN4 253 aaKnown RBP12.96□□□□□ -0.33
PCDHA12-201ENST00000398631 TSC2P49815 1807 aa12.96□□□□□ -0.33
PCDHA12-201ENST00000398631 NLRC5Q86WI3 1866 aa12.96□□□□□ -0.33
PCDHA12-201ENST00000398631 TCF15Q12870 199 aa12.96□□□□□ -0.34
PCDHA12-201ENST00000398631 LY6G5BQ8NDX9 201 aa12.96□□□□□ -0.34
PCDHA12-201ENST00000398631 FAM231BA6NCW3 169 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 C1orf122Q6ZSJ8 110 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 ZNF134P52741 427 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 IGFL2Q6UWQ7 119 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 KIAA1671Q9BY89 1806 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 ELANEP08246 267 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 TPSG1Q9NRR2 321 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 HELZP42694 1942 aaKnown RBP12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 KNCNA6PVL3 124 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 IGLV3-1P01715 115 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 SS18Q15532 418 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 C8orf86Q6ZUL3 223 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 C3orf79P0CE67 100 aa12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 SONP18583 2426 aaKnown RBP12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 ATXN8Q156A1 80 aa12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 ZC2HC1BQ5TFG8 222 aa12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 IGF2-ASQ6U949 168 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms