RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 PRB4P10163 310 aaPredicted RBP17.51■□□□□ 0.39
TSPAN4-203ENST00000397397 RPUSD4Q96CM3 377 aaKnown RBP17.51■□□□□ 0.39
TSPAN4-203ENST00000397397 MRPL53Q96EL3 112 aaKnown RBP17.51■□□□□ 0.39
TSPAN4-203ENST00000397397 GNG13Q9P2W3 67 aa17.51■□□□□ 0.39
TSPAN4-203ENST00000397397 FAM74A7A6NL05 159 aa17.5■□□□□ 0.39
TSPAN4-203ENST00000397397 KNCNA6PVL3 124 aa17.5■□□□□ 0.39
TSPAN4-203ENST00000397397 PAGE4O60829 102 aa17.5■□□□□ 0.39
TSPAN4-203ENST00000397397 SUMO1P63165 101 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-203ENST00000397397 LYPD6BQ8NI32 183 aa17.49■□□□□ 0.39
TSPAN4-203ENST00000397397 GGTLC3B5MD39 225 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 PRAC2D3DTV9 90 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 F6UB75 175 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 SLC25A5P05141 298 aaKnown RBP17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 NMBP08949 121 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 CSN1S1P47710 185 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 ACTL10Q5JWF8 245 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 CST9LP1Q5W188 147 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 EBLN2Q6P2I7 272 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 FOXI2Q6ZQN5 318 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 CMTM2Q8TAZ6 248 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 CITED4Q96RK1 184 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 SAV1Q9H4B6 383 aaPredicted RBP17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 SRD5A3Q9H8P0 318 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 MANBALQ9NQG1 85 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 ARL2-SNX15V9GYD0 113 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 NOTCH1P46531 2555 aa17.48■□□□□ 0.39
TSPAN4-203ENST00000397397 IFNA1P01562 189 aa17.47■□□□□ 0.39
TSPAN4-203ENST00000397397 RAB14P61106 215 aa17.47■□□□□ 0.39
TSPAN4-203ENST00000397397 GDF5OSQ5U4N7 250 aa17.47■□□□□ 0.39
TSPAN4-203ENST00000397397 NKX6-2Q9C056 277 aaPredicted RBP17.47■□□□□ 0.39
TSPAN4-203ENST00000397397 RXFP4Q8TDU9 374 aa17.47■□□□□ 0.39
TSPAN4-203ENST00000397397 TUBA4BQ9H853 241 aa17.47■□□□□ 0.39
TSPAN4-203ENST00000397397 RPH3ALQ9UNE2 315 aa17.47■□□□□ 0.39
TSPAN4-203ENST00000397397 A0A0J9YX75 114 aa17.46■□□□□ 0.39
TSPAN4-203ENST00000397397 K7EIL1 84 aa17.46■□□□□ 0.39
TSPAN4-203ENST00000397397 ZNF705DP0CH99 300 aaPredicted RBP17.46■□□□□ 0.39
TSPAN4-203ENST00000397397 ZNF705BP0CI00 300 aaPredicted RBP17.46■□□□□ 0.39
TSPAN4-203ENST00000397397 STHQ8IWL8 128 aa17.46■□□□□ 0.39
TSPAN4-203ENST00000397397 C5orf17Q8NAS9 161 aa17.46■□□□□ 0.39
TSPAN4-203ENST00000397397 OR8A1Q8NGG7 326 aa17.46■□□□□ 0.39
TSPAN4-203ENST00000397397 IGHV4-30-4P0DP06 118 aa17.45■□□□□ 0.38
TSPAN4-203ENST00000397397 ATP5G3P48201 142 aa17.45■□□□□ 0.38
TSPAN4-203ENST00000397397 GNG5P63218 68 aa17.45■□□□□ 0.38
TSPAN4-203ENST00000397397 PMS2P11Q13670 270 aa17.45■□□□□ 0.38
TSPAN4-203ENST00000397397 HAGHQ16775 308 aa17.45■□□□□ 0.38
TSPAN4-203ENST00000397397 HLA-DRB4P13762 266 aa17.44■□□□□ 0.38
TSPAN4-203ENST00000397397 HIST1H1AQ02539 215 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-203ENST00000397397 OR10J6PQ8NGY7 276 aa17.44■□□□□ 0.38
TSPAN4-203ENST00000397397 HLA-DRB4X5D2U9 266 aa17.44■□□□□ 0.38
TSPAN4-203ENST00000397397 AGRNO00468 2067 aa17.43■□□□□ 0.38
TSPAN4-203ENST00000397397 IGKV2-40A0A087WW87 121 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-203ENST00000397397 DIRC3C9JPN6 131 aa17.43■□□□□ 0.38
TSPAN4-203ENST00000397397 H3BMM0 161 aa17.43■□□□□ 0.38
TSPAN4-203ENST00000397397 IGKV2D-40P01614 121 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-203ENST00000397397 ARL6IP6Q8N6S5 226 aa17.43■□□□□ 0.38
TSPAN4-203ENST00000397397 EPDR1Q9UM22 224 aa17.43■□□□□ 0.38
TSPAN4-203ENST00000397397 C11orf94C9JXX5 98 aa17.42■□□□□ 0.38
TSPAN4-203ENST00000397397 DUSP14O95147 198 aaKnown RBP17.42■□□□□ 0.38
TSPAN4-203ENST00000397397 BCL2P10415 239 aa17.42■□□□□ 0.38
TSPAN4-203ENST00000397397 CCDC28AQ8IWP9 274 aa17.42■□□□□ 0.38
TSPAN4-203ENST00000397397 OR4B1Q8NGF8 309 aa17.42■□□□□ 0.38
TSPAN4-203ENST00000397397 IGKV3-20P01619 116 aa17.41■□□□□ 0.38
TSPAN4-203ENST00000397397 RPL35AP18077 110 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-203ENST00000397397 CNN1P51911 297 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-203ENST00000397397 GOLT1AQ6ZVE7 132 aa17.41■□□□□ 0.38
TSPAN4-203ENST00000397397 PRKDCP78527 4128 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-203ENST00000397397 LOC102723971A0A1B0GUV8 181 aa17.4■□□□□ 0.38
TSPAN4-203ENST00000397397 TCRAP04437 139 aa17.4■□□□□ 0.38
TSPAN4-203ENST00000397397 TAGLN2P37802 199 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-203ENST00000397397 ERCC8Q13216 396 aa17.4■□□□□ 0.38
TSPAN4-203ENST00000397397 DEFB121Q5J5C9 76 aa17.4■□□□□ 0.38
TSPAN4-203ENST00000397397 CLLU1Q5K131 121 aa17.4■□□□□ 0.38
TSPAN4-203ENST00000397397 TRPT1Q86TN4 253 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-203ENST00000397397 VAX2Q9UIW0 290 aa17.4■□□□□ 0.38
TSPAN4-203ENST00000397397 RBMY1BA6NDE4 496 aaKnown RBP17.39■□□□□ 0.38
TSPAN4-203ENST00000397397 RBMY1EA6NEQ0 496 aaKnown RBP17.39■□□□□ 0.38
TSPAN4-203ENST00000397397 RBFOX3A6NFN3 312 aa17.39■□□□□ 0.38
TSPAN4-203ENST00000397397 A8MZ25 164 aa17.39■□□□□ 0.38
TSPAN4-203ENST00000397397 RGS13O14921 159 aa17.39■□□□□ 0.38
TSPAN4-203ENST00000397397 RBMY1DP0C7P1 496 aaKnown RBP17.39■□□□□ 0.38
TSPAN4-203ENST00000397397 RARRES2Q99969 163 aa17.39■□□□□ 0.38
TSPAN4-203ENST00000397397 VGLL1Q99990 258 aa17.39■□□□□ 0.38
TSPAN4-203ENST00000397397 TXNDC17Q9BRA2 123 aa17.39■□□□□ 0.38
TSPAN4-203ENST00000397397 TCEAL7Q9BRU2 100 aa17.39■□□□□ 0.38
TSPAN4-203ENST00000397397 LOC102724200A0A096LPH7 203 aaPredicted RBP17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 NPIPB6E9PJ23 425 aa17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 PEX7O00628 323 aa17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 MEF2BQ02080 365 aaPredicted RBP17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 ATG101Q9BSB4 218 aa17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 SERTM2A0A1B0GWG4 89 aa17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 RBAKDNA6NC62 111 aa17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 F6UZH7 168 aa17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 K7EQM0 130 aa17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 TOR2AQ5JU69 321 aa17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 CYB561D1Q8N8Q1 229 aa17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 MRAPQ8TCY5 172 aa17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 HIST1H2BAQ96A08 127 aa17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 FAM210AQ96ND0 272 aa17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 AGPAT4-IT1Q9H0P7 198 aa17.38■□□□□ 0.37
TSPAN4-203ENST00000397397 PPP1R14DQ9NXH3 145 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms